Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006247716.1 | Gene: | Abca6 / 303639 | RGDID: | 1308998 | Length: | 1630 | Species: | Rattus norvegicus |
Alignment Length: | 1817 | Identity: | 453/1817 - (24%) |
---|---|---|---|
Similarity: | 822/1817 - (45%) | Gaps: | 350/1817 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHR 76
Fly 77 SSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVE--------EAWQSLGKNKICES 133
Fly 134 ENATQLELDTVSKNAFAGVQFDDAW-----ANLTENDP-LPNDFHFALRFPAELRTATIAIANTW 192
Fly 193 LTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVV------M 251
Fly 252 KRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTA 316
Fly 317 WFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRAS 381
Fly 382 TAAAVTGLIWFIAYIPY---SFTINSYDDLSLSSKLGW--SLISNTAMGFGIKLILGFEGTGEGL 441
Fly 442 QWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGE- 505
Fly 506 ---------------REYTGVEDIPNGHVEQRDPKAFETEP-----EGKHIGLQMRHLKKRF--- 547
Fly 548 -GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAII---NGSDIRTNIEGA 608
Fly 609 RMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGM 673
Fly 674 KRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIA 738
Fly 739 IMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLP 803
Fly 804 DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKDQHEIMNGGSGFRG 868
Fly 869 EDDNESVQSDGIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNK------LLLLIQNIMPVF-- 925
Fly 926 FVVVTILIIKTQGTFQE----LKPITISLTQYP--LAVTVLDRSNVQNGTGYEIANKYEDLARSY 984
Fly 985 -GSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVH 1048
Fly 1049 NAIADKLFGSSVKIQVTNAPLPYTTSTLLSQ--LSTGNNL---GTQLAS-NLCFCMCFVSSIYIL 1107
Fly 1108 FLIKERESRAKLLQFVGGVKVWTFWLSQFICD---FASYIVTALIVVIT-----IVCFQETGLST 1164
Fly 1165 FGELGRYYLLLLLFGFAV-LPFI-YIMSLFFREPATGFARVSIVNIFCGMALFIVVVVM-SSELF 1226
Fly 1227 DTKDTADILGWIFRIFPHFSLAMSLNKV------YTNTATRNACAKAGALPPILLCELVPQCCNL 1285
Fly 1286 KPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFR-----LINELMFKIR-QLISKPPPPPTEGQ 1344
Fly 1345 LDDDVANERERILQMSSNELATKNL---------VLDRVTKYYGQ----------FMAVNQVSLC 1390
Fly 1391 VQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSL----ESNMNSIYKMIGYCPQFDA 1451
Fly 1452 LLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIG 1516
Fly 1517 SPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCI 1580
Fly 1581 GSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEY 1645
Fly 1646 PNSILQEEYQGILTFYIPLTGV-KWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQ 1706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 48/184 (26%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 51/210 (24%) | ||
CcmA | 538..843 | CDD:224054 | 113/311 (36%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 83/223 (37%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 93/440 (21%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 75/241 (31%) | ||
drrA | 1376..1702 | CDD:130256 | 104/341 (30%) | ||
Abca6 | XP_006247716.1 | ABC2_membrane_3 | 35..420 | CDD:289468 | 92/473 (19%) |
ABC2_membrane_4 | 220..409 | CDD:289500 | 51/209 (24%) | ||
CcmA | 480..795 | CDD:224054 | 113/317 (36%) | ||
ABC_subfamily_A | 482..705 | CDD:213230 | 83/223 (37%) | ||
ABC2_membrane_3 | 859..1171 | CDD:289468 | 80/362 (22%) | ||
ABC2_membrane_4 | 1007..1178 | CDD:289500 | 46/187 (25%) | ||
CcmA | 1279..1605 | CDD:224054 | 106/356 (30%) | ||
ABC_subfamily_A | 1300..1514 | CDD:213230 | 70/214 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342237 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.650 |