Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943365.1 | Gene: | Abca8 / 303637 | RGDID: | 1307069 | Length: | 1620 | Species: | Rattus norvegicus |
Alignment Length: | 1790 | Identity: | 468/1790 - (26%) |
---|---|---|---|
Similarity: | 805/1790 - (44%) | Gaps: | 297/1790 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRS 77
Fly 78 SYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEE--AWQSLGKNKI---CESENAT 137
Fly 138 QLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPTID 202
Fly 203 LTGPRNEGDDDGGIPPGY----------LREGFLPLQHSLSMAYLRQKSGEQDLPNVV------M 251
Fly 252 KRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTA 316
Fly 317 W------FVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMAT 375
Fly 376 FFSRASTAAAVTGLIWFIAYI---PYSFT-INSYDDLSLSSKLGW--SLISNTAMGFGIKLILGF 434
Fly 435 EGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTR 499
Fly 500 EFWCGERE------YTGVEDIP--NGHVEQRDPKAFETEPEGKHIGLQMRHLKKRFGNK----MV 552
Fly 553 VKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAII--NGSDIRTNIEGARMSLGIC 615
Fly 616 PQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVC 680
Fly 681 CALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGEL 745
Fly 746 KCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKF 810
Fly 811 EEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKD-QHEIMNGGSGFRGEDDN-- 872
Fly 873 -ESVQSDGIFSENRRLLQGLQLLSNQW----KAMLLKKFLYTWRNKLL--LLIQNI--MPVFFVV 928
Fly 929 VTILIIKTQGTFQELKPITISLTQYPLAVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYGLELT 993
Fly 994 GTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVHNAIADKLFGS 1058
Fly 1059 SVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSI--YI-LFLIKERESRAKLL 1120
Fly 1121 QFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPF 1185
Fly 1186 IYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKDTADILGWIFRIFPHFS-LAM 1249
Fly 1250 SLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPY-FAWEEPGVLPETVYMAVTGVVFFLI 1313
Fly 1314 IIV--LEFRLINELM-----FKI---RQLISKPPPPPTEGQLDDDVANERERILQ-MSSNELATK 1367
Fly 1368 NLVLDRVTK--YYGQF----------MAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERI 1420
Fly 1421 SSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAK 1485
Fly 1486 SFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSG 1549
Fly 1550 KSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSG 1614
Fly 1615 GYARNPDEQTVPAQMSQRDIDAVKEFVETE----YPNSILQEEYQGILTFYIPLTGVK-WSRIFG 1674
Fly 1675 LMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 50/191 (26%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 50/217 (23%) | ||
CcmA | 538..843 | CDD:224054 | 113/310 (36%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 85/222 (38%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 82/411 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 81/230 (35%) | ||
drrA | 1376..1702 | CDD:130256 | 113/343 (33%) | ||
Abca8 | XP_038943365.1 | rim_protein | <261..1597 | CDD:130324 | 404/1467 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342197 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |