Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_237242.6 | Gene: | Abca12 / 301482 | RGDID: | 1304586 | Length: | 2595 | Species: | Rattus norvegicus |
Alignment Length: | 1700 | Identity: | 514/1700 - (30%) |
---|---|---|---|
Similarity: | 840/1700 - (49%) | Gaps: | 242/1700 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 162 TENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPT-IDLTGPRNEGDDDGGIPPGYLR--- 222
Fly 223 EGFLPLQHSLSMAYLRQKSG--EQDLPNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCT 285
Fly 286 YITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKS--FIMLTISAILIAILVKINWSEDVAVLT 348
Fly 349 HANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSK 413
Fly 414 LGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLY 478
Fly 479 VEQVMPGSFGVPRPWNFPFTREFW-----CGEREYTGVEDI-----------PNGHVEQRD---P 524
Fly 525 KAFETEPEGKHIGLQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPP 589
Fly 590 TSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMK--GLRGKAVEQEVAKY 652
Fly 653 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVG 717
Fly 718 RTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDD--------CET 774
Fly 775 NEVTALLNKYIPGLKPECDIGAELSYQLP---DSASAKFEEMFGQLEEQSDELHLNGYGVGITSM 836
Fly 837 EEVFMKVGAEKDNTGNIKDQH----EIMNGGSGFRGEDDNESVQS-------DGIFSENRRLLQG 890
Fly 891 LQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTI---LIIKTQGTFQEL--------- 943
Fly 944 --------------KPITISLTQYP-LAVTVLDRSNVQ----------NGTGYEIAN-------- 975
Fly 976 ------KYE---DLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRY-------------- 1017
Fly 1018 --LVAATITESKITAWLNNQALHTAPLTVNMVHNAI----ADKLFGSSVKIQVTNAPLP------ 1070
Fly 1071 -YTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLS 1134
Fly 1135 QFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATG 1199
Fly 1200 FARVSIVNIFCGMALFIVVVVMSSELFDTKD---------TADILGWIFRIFPHFSLAMSLNKVY 1255
Fly 1256 TNTATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFR 1320
Fly 1321 LINELMFKIRQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLV-LDRVTKYY----GQ 1380
Fly 1381 FMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLE-SNMNSIYKMIG 1444
Fly 1445 YCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLS 1509
Fly 1510 TAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVN 1574
Fly 1575 GEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKE 1639
Fly 1640 FVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAK 1704
Fly 1705 ----YQREDT 1710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 53/181 (29%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 63/207 (30%) | ||
CcmA | 538..843 | CDD:224054 | 127/317 (40%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 96/218 (44%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 97/492 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 112/223 (50%) | ||
drrA | 1376..1702 | CDD:130256 | 134/330 (41%) | ||
Abca12 | XP_237242.6 | ABC2_membrane_3 | <1006..1267 | CDD:289468 | 78/276 (28%) |
NosY | <1108..1269 | CDD:224196 | 54/167 (32%) | ||
ZnuC | 1346..1570 | CDD:224046 | 98/223 (44%) | ||
ABC_subfamily_A | 1350..1565 | CDD:213230 | 96/214 (45%) | ||
ABC2_membrane_3 | <1913..2174 | CDD:289468 | 60/272 (22%) | ||
CcmA | 2253..2567 | CDD:224054 | 140/340 (41%) | ||
ABC_subfamily_A | 2254..2477 | CDD:213230 | 111/222 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342229 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.750 |