Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997481.1 | Gene: | Abca7 / 299609 | RGDID: | 1303134 | Length: | 2170 | Species: | Rattus norvegicus |
Alignment Length: | 1951 | Identity: | 591/1951 - (30%) |
---|---|---|---|
Similarity: | 900/1951 - (46%) | Gaps: | 424/1951 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 PAIFSLL-----LVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSL--HRSSY--------LGKLI 84
Fly 85 ALIAPNRRRKNGGFSKFEFILCYS----PVNPVLKKLVEEAWQSLGKNKICESENATQLELDTVS 145
Fly 146 KNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPTIDLTGP---- 206
Fly 207 ---RNEGDD--------DGGIPPG----------YLREGFLPLQHSLSMAYLRQKSGEQDLPNVV 250
Fly 251 MKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWT 315
Fly 316 AWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRA 380
Fly 381 STAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSN 445
Fly 446 FFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTG 510
Fly 511 VEDIPNGHV---EQRDPKAF-ETEPEGKHIGLQMRHLKKRF--GNKMVVKGLSMNMFEDEITVLL 569
Fly 570 GHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFF 634
Fly 635 SRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGM 699
Fly 700 DPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRL 764
Fly 765 ICVK----------RDDCE--------------------------TNEVTA-------------- 779
Fly 780 -LLNKYIPGLKPECDIGAELSYQLP--DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFM 841
Fly 842 KVGAEKDNTGNIKD----QHEIMNGGSGFRGEDDNESVQSDGIFSE-------------NRRLLQ 889
Fly 890 GLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQY- 953
Fly 954 ----------------------------------------------------------PLAVTVL 960
Fly 961 DRSN-------------------------------------------VQNGTGYEIAN----KYE 978
Fly 979 DLAR------------SYGSNYGLELTGTQGFEDYILDLGKTI-----QVRI-------NSRYLV 1019
Fly 1020 AATITE--------SKITAWLNNQALHTAPLTVNMVHNAIADKLFGS-SVK----IQVTNAPLPY 1071
Fly 1072 TTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQF 1136
Fly 1137 ICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFA 1201
Fly 1202 RVSIVNIFCG----MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRN 1262
Fly 1263 ACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMF 1327
Fly 1328 KIRQLISKPPP----PPTEGQLDDDVANERERILQMSSNELATKN--LVLDRVTKYY-GQ-FMAV 1384
Fly 1385 NQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQF 1449
Fly 1450 DALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAV 1514
Fly 1515 IGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKC 1579
Fly 1580 IGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETE 1644
Fly 1645 YPNSILQEEYQGILTFYIPL-TGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRE 1708
Fly 1709 D 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 57/179 (32%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 66/205 (32%) | ||
CcmA | 538..843 | CDD:224054 | 133/359 (37%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 102/218 (47%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 116/549 (21%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 121/219 (55%) | ||
drrA | 1376..1702 | CDD:130256 | 152/328 (46%) | ||
Abca7 | NP_997481.1 | rim_protein | 1..2127 | CDD:130324 | 588/1944 (30%) |
ABC2_membrane | <557..742 | CDD:304374 | 61/190 (32%) | ||
ABC_subfamily_A | 805..1024 | CDD:213230 | 102/218 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1044..1086 | 4/41 (10%) | |||
ABC_subfamily_A | 1818..2038 | CDD:213230 | 121/219 (55%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2129..2170 | 2/4 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342221 | |
Domainoid | 1 | 1.000 | 158 | 1.000 | Domainoid score | I4008 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.660 |