Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943368.1 | Gene: | Abca9 / 287788 | RGDID: | 1305931 | Length: | 1653 | Species: | Rattus norvegicus |
Alignment Length: | 1824 | Identity: | 453/1824 - (24%) |
---|---|---|---|
Similarity: | 807/1824 - (44%) | Gaps: | 368/1824 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRS 77
Fly 78 SYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKICESENATQLELD 142
Fly 143 TVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPT---IDLT 204
Fly 205 GP----RNEGDDDGGIPPGYLREGFLPLQHSLSMAYLR---QKSGEQDLPNV---VMKRYPFPA- 258
Fly 259 -------YIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTA 316
Fly 317 WFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRAS 381
Fly 382 TAAAVTGLI-------------------------WFIAYI-PYSFTINSYDDLSLSSKLGWSLIS 420
Fly 421 NTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPG 485
Fly 486 SFGVPRPWNFPFTREFWCGERE------YTGVEDIP--NGHVEQRDPKAFETEPEGKHIGLQMRH 542
Fly 543 LKKRF----GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGT-AIINGSDIR 602
Fly 603 TNIEGARMSL-GICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVAS 666
Fly 667 SKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEAD 731
Fly 732 VLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGA 796
Fly 797 ELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVG----AEKDNTGNIKDQH 857
Fly 858 EIMNGGSGFRGEDDNESVQSDGIFSENRRLL---------QGLQLLSNQWKAMLLKKF--LYTWR 911
Fly 912 NKLLLLIQNIMPVFFV--VVTILIIKT--QGTFQELKPITISLTQYPLAVTVLDRSNVQNGTGYE 972
Fly 973 IANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQAL 1037
Fly 1038 HTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVS 1102
Fly 1103 SIYILFLIKERESRAKLLQFV--GGV---------KVWT-------FWLSQFICDFASYIVTALI 1149
Fly 1150 VVITIVCFQETGLSTFGELGRYYLLLLL---FGFA--VLPFIYIMSLFFREPATGFARVSIVNIF 1209
Fly 1210 CGMALFIVVVVMSSELFDTKDTADILGWIFRIF-----PHFSLAMSLNKVYTNTATRNACAKAGA 1269
Fly 1270 LPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLIS 1334
Fly 1335 -KP------PPPPTEGQLDDDVANERERIL-QMSSNELATKNLVL-DRVTKYY-----------G 1379
Fly 1380 QFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIG 1444
Fly 1445 YCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLS 1509
Fly 1510 TAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSHSMEECEALCTRLAIMV 1573
Fly 1574 NGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVK 1638
Fly 1639 EFVETEYPNSILQEEYQGILTFYIPLTGVK-WSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEF 1702
Fly 1703 AKYQ 1706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 46/213 (22%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 45/231 (19%) | ||
CcmA | 538..843 | CDD:224054 | 117/310 (38%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 90/222 (41%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 77/434 (18%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 78/230 (34%) | ||
drrA | 1376..1702 | CDD:130256 | 107/338 (32%) | ||
Abca9 | XP_038943368.1 | rim_protein | <207..1630 | CDD:130324 | 411/1604 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342297 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |