Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034670.1 | Gene: | Abca3 / 27410 | MGIID: | 1351617 | Length: | 1704 | Species: | Mus musculus |
Alignment Length: | 1784 | Identity: | 666/1784 - (37%) |
---|---|---|---|
Similarity: | 1009/1784 - (56%) | Gaps: | 166/1784 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 KFVLLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQ-KGVRYYNEQNLTDLNLLQH 72
Fly 73 SLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKI----CES 133
Fly 134 ENATQLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELR------TATIAIANT- 191
Fly 192 -WLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLR---QKSGEQDLPN--VV 250
Fly 251 MKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWT 315
Fly 316 AWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRA 380
Fly 381 STAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSN 445
Fly 446 FFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGE-REYT 509
Fly 510 GVEDIPNGHVEQRDPKA------FETEPEGKHIGLQMRHLKKRF--GN--KMVVKGLSMNMFEDE 564
Fly 565 ITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSN 629
Fly 630 HIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDE 694
Fly 695 PSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYG 759
Fly 760 SGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDEL 824
Fly 825 HLNGYGVGITSMEEVFMKVGAEKDNTGNIKD--------QHE--------------IMNGGSGFR 867
Fly 868 GEDDNESVQSDGIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTIL 932
Fly 933 IIKTQGTFQELKPITISLTQY-----PLAVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYGLEL 992
Fly 993 TGTQGFEDYILDLGKTIQVRINSRYLVAATITE----SKITAWLNNQALHTAPLTVNMVHNAIAD 1053
Fly 1054 KLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAK 1118
Fly 1119 LLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVL 1183
Fly 1184 PFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLA 1248
Fly 1249 MSLNKVYTNTATRNACAKAGALPPILLCELVPQCC---NL---KPYFAWEEPGVLPETVYMAVTG 1307
Fly 1308 VVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQL---------DDDVANERERILQMSSNE 1363
Fly 1364 LATKNLVLDRVTKYYGQ---FMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAA 1425
Fly 1426 YVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFM 1490
Fly 1491 KHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLT 1555
Fly 1556 SHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNP 1620
Fly 1621 DEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNV 1685
Fly 1686 EDYSVSQTTLEEIFLEFAKYQ---REDTR 1711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 75/179 (42%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 83/205 (40%) | ||
CcmA | 538..843 | CDD:224054 | 156/308 (51%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 123/220 (56%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 107/417 (26%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 130/220 (59%) | ||
drrA | 1376..1702 | CDD:130256 | 164/328 (50%) | ||
Abca3 | NP_001034670.1 | rim_protein | 1..>43 | CDD:130324 | 16/36 (44%) |
rim_protein | <206..1699 | CDD:130324 | 605/1553 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838423 | |
Domainoid | 1 | 1.000 | 180 | 1.000 | Domainoid score | I3485 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37437 | |
Inparanoid | 1 | 1.050 | 1133 | 1.000 | Inparanoid score | I220 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3774 |
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8719 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4336 |
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.750 |