Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_038879.2 | Gene: | Abca8b / 27404 | MGIID: | 1351668 | Length: | 1620 | Species: | Mus musculus |
Alignment Length: | 1819 | Identity: | 472/1819 - (25%) |
---|---|---|---|
Similarity: | 815/1819 - (44%) | Gaps: | 356/1819 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRS 77
Fly 78 SYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEE--AWQSLGKNKI---CESENAT 137
Fly 138 QLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPA--ELR-----------TATIAIA 189
Fly 190 NTWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVV---- 250
Fly 251 --MKRYPFPAYIFDPLLEGMSS---IMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSN 310
Fly 311 WLHWTAW------FVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICF 369
Fly 370 CFMMATFFSRASTAAAVTGLIWFIAYI---PYSFT-INSYDDLSLSSKLGW--SLISNTAMGFGI 428
Fly 429 KLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPW 493
Fly 494 NFPFTREFWCGERE------YTGVEDIPNGHVEQRDPKAFE-TEPE--GKHIGLQMRHLKKRFGN 549
Fly 550 K----MVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDI--RTNIEGA 608
Fly 609 RMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGM 673
Fly 674 KRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIA 738
Fly 739 IMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLP 803
Fly 804 DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKD-QHEIMNGGSGFR 867
Fly 868 GEDDNESVQSDGIFSENRRL--LQGLQLLSNQW------KAMLLKKFLYTWRNKLLLLIQNIMPV 924
Fly 925 FFVVVTILIIKTQGTFQELKPITISLTQYPLAVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYG 989
Fly 990 LEL--TGTQ-GFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVHNAI 1051
Fly 1052 ADKLFGSSVKIQV---------TNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYIL 1107
Fly 1108 FLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYY 1172
Fly 1173 LLLLLFGFAVLPFIYIMSLFFREPATGFARVS-IVNIFC----GMALFIVVVVMSSELFDTKDTA 1232
Fly 1233 DILGWIFRIFPHFSLAMSL-------NKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYFA 1290
Fly 1291 WEEPGVL-PETVYMAVTGVVFFLIIIV--LEFRLINELM-----FKI----RQLISKPPPPPTEG 1343
Fly 1344 QLDDDVANERERILQMSSNELATKN------LVLDRVTKYYG-----------QFMAVNQVSLCV 1391
Fly 1392 QEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDL 1456
Fly 1457 TGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVI 1521
Fly 1522 YLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQH 1585
Fly 1586 LKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETE----YP 1646
Fly 1647 NSILQEEYQGILTFYIPLTGVK-WSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 53/194 (27%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 53/220 (24%) | ||
CcmA | 538..843 | CDD:224054 | 111/310 (36%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 83/222 (37%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 84/427 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 83/229 (36%) | ||
drrA | 1376..1702 | CDD:130256 | 115/342 (34%) | ||
Abca8b | NP_038879.2 | rim_protein | <265..1596 | CDD:130324 | 398/1486 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838407 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.650 |