Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_839990.2 | Gene: | Abca13 / 268379 | MGIID: | 2388707 | Length: | 5034 | Species: | Mus musculus |
Alignment Length: | 2013 | Identity: | 562/2013 - (27%) |
---|---|---|---|
Similarity: | 917/2013 - (45%) | Gaps: | 440/2013 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 WQMVIELV-LPA--IFSLLL----------VLVRTLVDTEQKGVRYYNEQNLTDL-----NLLQH 72
Fly 73 SLHRSSYLG------KLIAL--------IAPNRRRKNGGFSKFEFI---LCYSP----------- 109
Fly 110 ----VNPVLK-----------------KLVEE---------AWQSL-----GK----------NK 129
Fly 130 ICESENATQLELDTVS---------KNAFAGV-------QFDDAWAN-----------------L 161
Fly 162 TEN--------DPLPNDF---HFAL---------------RFPA-------ELRTATIAIANTWL 193
Fly 194 TMRLF-----------------PTIDLT---------------------GPRNEGDDDGGIPPGY 220
Fly 221 LREGFLPLQHSLSMAYLRQKSGEQDL-PNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPC 284
Fly 285 TYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTH 349
Fly 350 ANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKL 414
Fly 415 GWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYV 479
Fly 480 EQVMPGSFGVPRPWNFPFTREFW---CG--EREYTGV--------EDIPN-GHVEQRDPKAFETE 530
Fly 531 PEGKHIGLQMRHLKKRF-GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTA 594
Fly 595 IINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKG--LRGKAVEQEVAKYLKMIE 657
Fly 658 LEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLL 722
Fly 723 TTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDD-CETNE------VTAL 780
Fly 781 LNKYIPG--LKPECDIGAELSYQLP-DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMK 842
Fly 843 VGAEKDNTGNIKDQHEIMNGGSGFRGEDDNE--------------SVQSDGIFSENRRLLQGLQL 893
Fly 894 LSNQWKAMLLKKFLYT---WRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQYPL 955
Fly 956 AVTVLDRS-NVQNGTGYEIANKYEDL--------------------------------------- 980
Fly 981 -ARSYGSNYGLELTGTQGF--EDYIL-----------DLGKTI-----QVRINSRYLVAATITES 1026
Fly 1027 KITAWLNNQALHTAPLTVNMVHNAIA-DKLFGSSV---KIQVTNAPLPYTTSTLLSQLSTGNNLG 1087
Fly 1088 TQLASNLCFC---MCFVSSIYIL------FLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASY 1143
Fly 1144 IVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNI 1208
Fly 1209 FCGMALFIV-----VVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAG 1268
Fly 1269 ALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELM-----FK 1328
Fly 1329 IRQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYY-----GQFMAVNQVS 1388
Fly 1389 LCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYV---QGLSLE-SNMNSIYKMIGYCPQF 1449
Fly 1450 DALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAV 1514
Fly 1515 IGSPSVIYLDEPTTGMDPAARRQLWNMVCR-IRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFK 1578
Fly 1579 CIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVET 1643
Fly 1644 EYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQ 1706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 46/179 (26%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 55/205 (27%) | ||
CcmA | 538..843 | CDD:224054 | 134/317 (42%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 96/219 (44%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 98/479 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 110/227 (48%) | ||
drrA | 1376..1702 | CDD:130256 | 134/335 (40%) | ||
Abca13 | NP_839990.2 | rim_protein | 3036..5019 | CDD:130324 | 562/2013 (28%) |
ABC_subfamily_A | 3815..4030 | CDD:213230 | 96/214 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 4135..4165 | 5/38 (13%) | |||
ABC_subfamily_A | 4692..4919 | CDD:213230 | 110/227 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838504 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.750 |