Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006533124.3 | Gene: | Abca8a / 217258 | MGIID: | 2386846 | Length: | 1653 | Species: | Mus musculus |
Alignment Length: | 1845 | Identity: | 461/1845 - (24%) |
---|---|---|---|
Similarity: | 813/1845 - (44%) | Gaps: | 408/1845 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRS 77
Fly 78 SYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSL-----GKNKICESENAT 137
Fly 138 QLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPTID 202
Fly 203 LTGPRNEGDDDGGIPPGY-----------LREGFLPLQHSLSMAYLR---QKSGEQDLPNVVMKR 253
Fly 254 YPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITA---EKEKQLKEVMKIMGLSNWLHWT 315
Fly 316 AWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLII------YIVSSICFCFMMA 374
Fly 375 TFFSRASTAAAVT-------GLIWFIA---YIPYSFTINSYDDLSLSSKLGW--SLISNTAMGFG 427
Fly 428 -IKLI-LGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVP 490
Fly 491 RPWNFPFTREFWCG-----------EREYTGVEDIPNGHVEQRDPKAFE---TEPEGKHIGLQMR 541
Fly 542 HLKKRFGNKM----VVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDI- 601
Fly 602 -RTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVA 665
Fly 666 SSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEA 730
Fly 731 DVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIG 795
Fly 796 AELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKV-GAEKDNTGNIKDQHEI 859
Fly 860 MNGGSGFRGEDDNESVQSDGIFSENRRLLQ----------GLQLLSNQWKAMLLKKFLYTWRNK- 913
Fly 914 ---LLLLIQNIMPVFFVVVTILIIKTQGTF-QELKPITISLT-----QYPLAVTVLDRSNVQNGT 969
Fly 970 GYEIANKYEDLARSYGSNYGLELT--GTQ-GFEDYILDLGKTIQVRINSRYLVAATITESKITAW 1031
Fly 1032 LNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLP---------YTTSTLLSQLSTGNNLG 1087
Fly 1088 TQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVI 1152
Fly 1153 TIVCFQETGLSTFGELGRYYLLLLLFG---FAVLPFIYIMSLFFREPATG-------FARVS--- 1204
Fly 1205 ----IVNIFCGMALFIVVVVMSSEL--------FDTKDTADILGWIFRIFPHFSLAMSLNKVYTN 1257
Fly 1258 TATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFR-- 1320
Fly 1321 ---LINELMFKIR----QLISKPPPPPTEGQLDDDVANERERILQMSSNELATKN------LVLD 1372
Fly 1373 RVTKYY-----------GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAY 1426
Fly 1427 VQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMK 1491
Fly 1492 HIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLT 1555
Fly 1556 SHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNP 1620
Fly 1621 DEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVK-WSRIFGLMESNRDQLN 1684
Fly 1685 VEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 45/202 (22%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 50/228 (22%) | ||
CcmA | 538..843 | CDD:224054 | 114/310 (37%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 82/222 (37%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 82/449 (18%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 85/229 (37%) | ||
drrA | 1376..1702 | CDD:130256 | 115/338 (34%) | ||
Abca8a | XP_006533124.3 | rim_protein | <258..1630 | CDD:130324 | 409/1562 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838404 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |