Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997698.1 | Gene: | ABCA2 / 20 | HGNCID: | 32 | Length: | 2466 | Species: | Homo sapiens |
Alignment Length: | 1899 | Identity: | 580/1899 - (30%) |
---|---|---|---|
Similarity: | 904/1899 - (47%) | Gaps: | 416/1899 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 140 ELDTVSKNAFAGVQF--------------DDAWANLTEND--------------------PLPND 170
Fly 171 FHFALRFPAELRTATIAIANT-WLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSM 234
Fly 235 AYLRQKSGEQDL-PNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQ 298
Fly 299 LKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYI 363
Fly 364 VSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTI----NSYDDLSLSSKLGWSLISNTAM 424
Fly 425 GFGIKLILGFEGTGEGLQWSNFF-TPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFG 488
Fly 489 VPRPWNFPFTREFWCGEREYTGVE------DIPNGHVEQRD------------PKAFETEPEGKH 535
Fly 536 IGLQMRHLKKRF--GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIING 598
Fly 599 SDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKAN 663
Fly 664 VASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMD 728
Fly 729 EADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKR----------------------DD 771
Fly 772 CETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAK--FEEMFGQLEEQSDELHLNGYGVGIT 834
Fly 835 SMEEVFMKVGAE----KDNTGNIKD-QHEIMNGGSG----------------------------- 865
Fly 866 ---FRGED---------------------DN---ESVQSDGI--FSENRRLLQGLQLLSNQWKAM 901
Fly 902 LLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQY-----------PL 955
Fly 956 A-------------------------------VTVLDRS----------NVQNGTGYEIANKY-- 977
Fly 978 ---------------------------------EDL----------------------------- 980
Fly 981 ------ARSYG----SNYG--------------LELTGTQGFEDYIL-----------------D 1004
Fly 1005 LGKTIQVRINSRY--LVAATITESKITAWLNNQALHTAPLTVNMVHNAI------ADKLFGSSVK 1061
Fly 1062 IQVTNAPLPYTTSTL-LSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGG 1125
Fly 1126 VKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMS 1190
Fly 1191 LFFREPATGFARVSIVNIFCGMALFIVVVVMSSELF----DTKDTADILGWIFRIFPHFSLAMSL 1251
Fly 1252 NKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIV 1316
Fly 1317 LEFRLINELMFKIRQLISKPP--PPPTEGQLDD-DVANERERILQMSSNELATKNLVLDRVTKYY 1378
Fly 1379 -----GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNS 1438
Fly 1439 IYKMIGYCPQFDALLDDLTGREVLRIFCMLRGV---QESRIRQLSEDLAKSFGFMKHIDKQTHAY 1500
Fly 1501 SGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEAL 1565
Fly 1566 CTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMS 1630
Fly 1631 QRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTL 1695
Fly 1696 EEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 65/183 (36%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 77/210 (37%) | ||
CcmA | 538..843 | CDD:224054 | 147/330 (45%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 109/218 (50%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 117/572 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 121/225 (54%) | ||
drrA | 1376..1702 | CDD:130256 | 146/333 (44%) | ||
ABCA2 | NP_997698.1 | rim_protein | 58..2398 | CDD:130324 | 580/1897 (31%) |
ABC_subfamily_A | 1021..1240 | CDD:213230 | 109/218 (50%) | ||
ABC_subfamily_A | 2081..2304 | CDD:213230 | 122/228 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165148384 | |
Domainoid | 1 | 1.000 | 161 | 1.000 | Domainoid score | I4008 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.660 |