DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and LOC1280527

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_552044.4 Gene:LOC1280527 / 1280527 VectorBaseID:AGAMI1_010857 Length:1663 Species:Anopheles gambiae


Alignment Length:1735 Identity:827/1735 - (47%)
Similarity:1132/1735 - (65%) Gaps:105/1735 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TNWDKFVLLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQ----NLT 65
            :||.||||||||||.:...|..|...|:.:|.:..:||:::|.|||.|:      .||    |..
Mosquito     4 SNWGKFVLLLWKNWIITKRHYLQTFFEIAIPVLACILLIVIRGLVDAEE------FEQPTIFNPL 62

  Fly    66 DLNLLQHSLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKI 130
            :||.:.|..:.|.....:|..||                  |||.:|:|:.:||.:...|.:...
Mosquito    63 ELNTISHLRNNSQIDPPIIYSIA------------------YSPQSPLLQSIVERSTAYLDEELA 109

  Fly   131 CESENATQ-LELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRT---ATIAIANT 191
            ..:.|::| |:......|...|::|.|.:||||:   ||.....:||:|:|:||   ......|.
Mosquito   110 VIAFNSSQTLQAHLQVNNILVGIEFPDIYANLTQ---LPEQTVLSLRYPSEMRTFRETGTEFWNN 171

  Fly   192 WLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMKRYPF 256
            |.|.||||...:.|.|....||||.|..|..|.||.:|.::|.:.|:|:......|:|.:.|||:
Mosquito   172 WQTERLFPPFQVPGARQFERDDGGYPANYYNETFLQIQSAISRSILQQRDPNYQFPDVYLSRYPY 236

  Fly   257 PAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVK- 320
            |.:..|.||.|:.:::.|||:::|.|.|....||||.|||:||||.|||||||:||||:||||| 
Mosquito   237 PPFYSDNLLVGLENLLPLIIVIAFFYTCINTVKYITVEKERQLKEAMKIMGLSSWLHWSAWFVKC 301

  Fly   321 -SFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAA 384
             |.::::||.|.:.:.|.|..:.|:|:.|.||:.|:.|:|.||.:::|.|||||:||||:|:||:
Mosquito   302 ISLLLISISIITVLLCVSITTNTDLAIFTFANWFAIWFYLFIYSLATITFCFMMSTFFSKANTAS 366

  Fly   385 AVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTP 449
            .:.||:||:..:||:...::||.:|||:||...|..|:.|.||..||:..|||..||||||.|.|
Mosquito   367 GIAGLMWFVFVMPYNIAFSNYDTMSLSAKLALCLFHNSGMSFGFMLIMRHEGTTNGLQWSNMFDP 431

  Fly   450 VSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDI 514
            |:|||.|::||.|:|:|...|||::|.||||:|.||.:||..||.||.|::||..:...||.|| 
Mosquito   432 VTVDDDLSVGATMMMLLADAVIYLVIALYVEKVFPGEYGVAEPWYFPVTKKFWTSQVTPTGGED- 495

  Fly   515 PNGHVEQRD---PKAFETEPEGKHIGLQMRHLKKRFG-NKMVVKGLSMNMFEDEITVLLGHNGAG 575
              |..:|.|   ....|.||.||:.|::::.|:|.|. .|:.||||.::||||:|||||||||||
Mosquito   496 --GAEQQHDISGSTTVEAEPVGKYAGIRIKGLRKVFNKTKVAVKGLHLSMFEDQITVLLGHNGAG 558

  Fly   576 KTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGL 640
            ||||:|||||:|.||||||:||..|||:||||||.|||:||||||||:||:||.||:||:|:||:
Mosquito   559 KTTTMSMLTGVFSPTSGTALINDCDIRSNIEGARKSLGLCPQHNVLFNEMTVSEHIKFFARLKGV 623

  Fly   641 RGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARR 705
            ..|.:.||:..|:.:::||||.:..|..|||||||||:|..||||.:|||.||||:|||||:|||
Mosquito   624 ESKRIPQEIDHYVSVLQLEDKRHAQSHTLSGGMKRKLAVGVALCGGSKVVFCDEPTSGMDPTARR 688

  Fly   706 QLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRD 770
            .|||||.|||.|||:||:||||||||:||||||||.|||||..|:||||||::|.||||||||.|
Mosquito   689 ALWDLLIQEKKGRTILLSTHFMDEADILGDRIAIMADGELKAAGSSFFLKKRFGVGYRLICVKED 753

  Fly   771 DCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITS 835
            .|::..||.|:.|:||.|..:.|||.||||.|.|..:|.|:.:...||..|..|.::.||:.:|:
Mosquito   754 GCDSTRVTDLMRKHIPNLDVDTDIGTELSYVLDDEYTALFQPLLQDLETHSTSLGISSYGISLTT 818

  Fly   836 MEEVFMKVGAEK---DNTGNIKDQ-------HEIMNGGSGFRGEDDNESVQSDGIFSENRRLLQG 890
            :||||::||::.   |...|..||       .|..||.:.....||           ::.:||.|
Mosquito   819 LEEVFLRVGSDSHALDKKPNGTDQPAQPYALTETSNGSTVTLTLDD-----------QDHKLLTG 872

  Fly   891 LQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQYPL 955
            ..|||||.:||||||.:.|.|:.:.||:|..:|:|||::|::|:::......|..:.|:...|..
Mosquito   873 FPLLSNQLQAMLLKKAIATKRSWIALLVQIFIPIFFVIMTVVIVRSFPDALSLPALPIAFDSYSS 937

  Fly   956 AVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVA 1020
            .||||:.::...    .:...|:.|....|::..| :|.|:...||||...:....::|:.::|.
Mosquito   938 TVTVLEGTSADT----SVIQAYQQLFEGAGASRSL-VTVTEPMVDYILKRYEQNLPQVNNEFMVG 997

  Fly  1021 ATITESKITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNN 1085
            |:||.:..|.|.|.|..|||||.|:..:||:. :...:...|.:||.|||:...|..:||..|||
Mosquito   998 ASITPTNHTVWFNAQGFHTAPLAVSTFYNAML-RTVCAQCSILITNDPLPFRPETRFTQLQAGNN 1061

  Fly  1086 LGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIV 1150
            :|.|||.|..|.|.||:::||:|.||||.:|:||||||.|..|..|||..|:.||.::.||.:..
Mosquito  1062 MGFQLAFNTGFAMAFVAALYIMFYIKERVTRSKLLQFVSGANVLGFWLISFLWDFMTFFVTIMFY 1126

  Fly  1151 VITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALF 1215
            |..:..|||.|.||..|:||..|::::||||.||..|::|..|..||:||.:|.|:|||.|...|
Mosquito  1127 VAVLAAFQEDGWSTGDEIGRVILVMVVFGFAFLPLTYLLSFAFDIPASGFVKVMILNIFTGTIFF 1191

  Fly  1216 IVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGAL----PPILLC 1276
            :.|.::..:.||.:..|:.:.|.|.|||.|:|:.||:.:....||:..|....||    .|.|||
Mosquito  1192 MTVFLLLFDGFDLRHVAEGMEWAFLIFPLFALSHSLSNMNIAVATQQVCDSQCALIPNCTPELLC 1256

  Fly  1277 ELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPT 1341
            .:.|||||.: .|.:|..|:....:||.|.|::.||:::.:|:|:|:. :||.:   ||...||:
Mosquito  1257 RVFPQCCNTE-IFTFERTGISRNLMYMFVVGLISFLLLMCIEYRVIDR-VFKRK---SKQAAPPS 1316

  Fly  1342 EG-QLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFMAVNQVSLCVQEVECFGLLGVNGA 1405
            |. ::|.||..|:.|:..::..|:|..||||..|||||.:|:||||:||.|:..:||||||||||
Mosquito  1317 ESDEIDSDVRMEKLRVRGLTEGEIAANNLVLRDVTKYYKKFLAVNQLSLAVEHSQCFGLLGVNGA 1381

  Fly  1406 GKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRG 1470
            |||||||||||||.||.|.|:|.|:||.||||.:::.||||||||||:|||||||.||||.:|||
Mosquito  1382 GKTTTFKMMTGDENISYGEAWVNGVSLNSNMNEVHRRIGYCPQFDALIDDLTGRETLRIFALLRG 1446

  Fly  1471 VQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAAR 1535
            :.:|.|..||..||:...|.|||||||.|||||||||||||:|::|:|:|:|||||||||||.||
Mosquito  1447 IPKSEIAALSSRLAEELNFSKHIDKQTKAYSGGNKRKLSTALALMGNPAVVYLDEPTTGMDPGAR 1511

  Fly  1536 RQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKV 1600
            ||||::||:.|.:||:||||||||||||||||||||||||||||:|||||||||||.|..|.||:
Mosquito  1512 RQLWDVVCKERAAGKAIVLTSHSMEECEALCTRLAIMVNGEFKCLGSTQHLKNKFSNGYFLTIKL 1576

  Fly  1601 RRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLT 1665
            :|. |.:...|                      ||.||:::...:|.:.|:|||...:|:.||..
Mosquito  1577 KRT-EVVNTGR----------------------IDEVKQYIVERFPEAELKEEYLESVTYQIPSA 1618

  Fly  1666 GVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQR-ED 1709
            ..:||.:||:||..:..|::|||::.||:||::||.|.|:|| ||
Mosquito  1619 NTRWSTMFGIMEDAKKVLDIEDYALGQTSLEQVFLYFTKFQRVED 1663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 783/1596 (49%)
LOC1280527XP_552044.4 None

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