DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and LOC1276992

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_557048.4 Gene:LOC1276992 / 1276992 VectorBaseID:AGAMI1_002066 Length:1643 Species:Anopheles gambiae


Alignment Length:1724 Identity:772/1724 - (44%)
Similarity:1096/1724 - (63%) Gaps:103/1724 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKVTNWDKFVLLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLT 65
            ||..:.|:||||||||||.:|..|..|.:.|:::|.....:|::||.|||.||            
Mosquito     1 MASTSRWNKFVLLLWKNWIIQKRHYIQTLFEILIPVFCCAMLIVVRGLVDPEQ------------ 53

  Fly    66 DLNLLQHSLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKI 130
               :|..::.....:|.|        |..:..|......|.|||.|.:|::|:::|.    |.:|
Mosquito    54 ---VLTPTIFERLPIGSL--------RDLDTAFPPVTLSLAYSPQNAILQQLLDDAL----KEEI 103

  Fly   131 CESE--------NATQLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIA 187
            ..:.        ||.:||...:.:|...|::|.|::.|:|:   ||....:|:|.|.|||.....
Mosquito   104 TNTRAVSLVPLPNARELESLLMQRNYIGGIEFPDSYTNITD---LPQKLRYAIRLPGELRFTGWT 165

  Fly   188 IANTWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMK 252
            ..|......:.|.:.  |.||....||| .|.|.|||||.||.::|..::|::..:.|||:|.::
Mosquito   166 FGNWRTNFMVVPFVQ--GLRNANQSDGG-SPNYWREGFLTLQAAISRTFIRRQRADYDLPDVSLR 227

  Fly   253 RYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAW 317
            |:|:|.|..|.:|..|..::.:|||:||.|.|....|:||.||||||||.||||||.||||||||
Mosquito   228 RFPYPPYYEDLVLVAMERLLPMIILISFFYTCINTVKFITIEKEKQLKEAMKIMGLPNWLHWTAW 292

  Fly   318 FVKSFIMLTISAILIAILVKINW--SEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRA 380
            ||:..::|.|:..|:..|:..|.  :.|::|:.:|:::.|.||.:.||:.:|||||||:.||::|
Mosquito   293 FVRCLVLLLITISLLIFLISANLTPNTDLSVIEYADWSVLWFFFLSYILVTICFCFMMSVFFNKA 357

  Fly   381 STAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSN 445
            :|||.:.||:||:..||::..:.:||::::.||:..||:|||||.|||..|:..|....||||.|
Mosquito   358 NTAAGIAGLMWFLFAIPFNIAVQNYDEMAMGSKVASSLLSNTAMSFGIMNIIRLEADQVGLQWHN 422

  Fly   446 FFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTG 510
            .|:..|:.|..::|.||:|.:|..::|:.|.||.||||||.|||.:||||.|||:||...|    
Mosquito   423 LFSAPSMGDEFSVGLVMVMFVVDALLYLAIALYFEQVMPGEFGVAKPWNFLFTRDFWKRNR---- 483

  Fly   511 VEDIPNGHVEQRDPKAFETEPEGKHIGLQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAG 575
            :||......:......||.||.....|:::.:|:|.:|.|:.|:||::|||:..|||||||||||
Mosquito   484 IEDGSGDWAKAESSPYFEQEPNIDRAGVRIVNLRKVYGKKVAVEGLNLNMFDGHITVLLGHNGAG 548

  Fly   576 KTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGL 640
            ||||:|||||||.||||||::||.|||.:|||.|.|||:||||||||:|::|:.|::|||::||:
Mosquito   549 KTTTMSMLTGMFSPTSGTALVNGYDIRKDIEGVRFSLGLCPQHNVLFNELTVAEHLKFFSQLKGV 613

  Fly   641 RGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARR 705
            .|.....|:.||:.::||.||.|..|..|||||||||.|..||||.::|||.|||:|||||||||
Mosquito   614 PGDKTAAEIEKYVNLLELTDKRNAQSHTLSGGMKRKLGVGIALCGGSRVVLLDEPTSGMDPSARR 678

  Fly   706 QLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRD 770
            .||||:|:||||||::|:|||||||||||||||||.:|:|:..|:.|||||..|:||||||||..
Mosquito   679 ALWDLIQKEKVGRTVILSTHFMDEADVLGDRIAIMAEGKLRAIGSPFFLKKSLGAGYRLICVKEP 743

  Fly   771 DCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITS 835
            .|:...|..:|.||||.::.:.|||.|||:.|.:.....|:.|..:||::.....::.||:.:|:
Mosquito   744 TCDKKRVLEILKKYIPEVRIDTDIGTELSFVLREDYLKVFQPMLEELEDKMRSCGISSYGISLTT 808

  Fly   836 MEEVFMKVGAEK---DNTGNIKDQHEIMNGGSGFRGEDDNESVQSDGIFSENRRLLQGLQLLSNQ 897
            |||||::.|::.   :||.|        :..||:...::|..:.|    .|...||.|.:.|..|
Mosquito   809 MEEVFLRAGSDSFQAENTTN--------HTASGYIDMNENSDIYS----LEGLTLLDGSRRLFQQ 861

  Fly   898 WKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQYPLAVTVLDR 962
            ..|...||||.|.|:.:.|.:|.::|:.||:::.||.....|.::|..:.|:|.:|..::|||  
Mosquito   862 INAQFYKKFLTTIRSWITLSMQMLIPILFVLLSYLIFLNSSTGRDLPELKINLDRYSGSLTVL-- 924

  Fly   963 SNVQNGTGYE-IANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITES 1026
               |...|:| :...:.|..|:..:.:.| :...:....:||:.........|:||...|::..|
Mosquito   925 ---QTTDGFESVTAAFRDRFRTEPNVHQL-IVIDEDMTTFILNKSSQDIATFNTRYWAGASLDRS 985

  Fly  1027 KITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLA 1091
            ..|||.||:|.|:|||.|||::||:...:. .:.::||:|.||||...|.|.:|.||.|.|.|||
Mosquito   986 VCTAWFNNKAYHSAPLAVNMIYNALLQSIC-PNCELQVSNKPLPYRLDTQLQRLETGANAGFQLA 1049

  Fly  1092 SNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVC 1156
            .|..|.|.|||:::|||.||||.:||||||||.||.|..||...::.|:..::::||..:.|:..
Mosquito  1050 FNTGFAMAFVSALFILFYIKERTTRAKLLQFVSGVNVTLFWTISYLWDYMIFVLSALCYLATLAI 1114

  Fly  1157 FQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVM 1221
            .|:.|.|||.:|||..|:|||:.|:.||..|:.:..|..|||||.::.::|:..|...|..|.::
Mosquito  1115 IQQDGWSTFDQLGRVLLVLLLYAFSSLPVTYLFAYLFHVPATGFVKMMLLNVLSGTIFFTAVSLL 1179

  Fly  1222 SSELFDTKDTADILGWIFRIFPHFSLAMSLNKVY----TNTATRNACAKAGALPPILLCELVPQC 1282
            ..|..|..|.||:|.|||..||.|||..|:|.:.    .....:.||.:.......|.|.|||||
Mosquito  1180 RFEGIDLDDVADVLEWIFLFFPSFSLTQSMNALNMVGGREALCQRACEQITFCTEALKCALVPQC 1244

  Fly  1283 CNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDD 1347
            |....:...::.|:....::.|..|||.|.||:::::|:..:|..:....::.   ...:.:.|.
Mosquito  1245 CGTSAFTFDQQTGINRNLLFFAGIGVVSFAIILLVDYRVAKKLFSRSANGVTM---SSDQEETDS 1306

  Fly  1348 DVANERERILQMSSNELATKNLVLDRVTKYYGQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFK 1412
            ||..|:.||...||.|||:.||||..::|.||:|:|||::|:.|:..|||||||:||||||:|||
Mosquito  1307 DVLEEKRRIAACSSGELASYNLVLKELSKNYGKFVAVNKLSVGVRHSECFGLLGINGAGKTSTFK 1371

  Fly  1413 MMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIR 1477
            ||||||.|:.|.|:|.|::|.::||.::|.|||||||||||:||||||.|.||.::|||:...|.
Mosquito  1372 MMTGDENITGGDAWVNGINLRTDMNRVHKHIGYCPQFDALLEDLTGRETLHIFALMRGVRRREIN 1436

  Fly  1478 QLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV 1542
            .:|..||:...|.||:||:|.|||||||||||||:|::|:|||:|||||||||||.|:||.|:::
Mosquito  1437 GVSLTLAEELNFTKHLDKRTKAYSGGNKRKLSTALALLGNPSVVYLDEPTTGMDPGAKRQFWDVI 1501

  Fly  1543 CRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEAL 1607
            |::|.:|||||||||||||||||||||||||||||||:|||||||||||:|.:|.:|.:|.    
Mosquito  1502 CKVRSTGKSIVLTSHSMEECEALCTRLAIMVNGEFKCLGSTQHLKNKFSEGFLLTVKTKRT---- 1562

  Fly  1608 RQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRI 1672
                       .||.           .:.||.||.:::..::|:||||..|||:|..|..:||.:
Mosquito  1563 -----------EPDA-----------AERVKSFVTSKFVGAVLKEEYQDSLTFHIARTNQRWSAM 1605

  Fly  1673 FGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQ 1706
            ||||||::.:|.:|||::.|||||::||.|.|||
Mosquito  1606 FGLMESSKHRLGIEDYALGQTTLEQVFLFFTKYQ 1639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 729/1580 (46%)
LOC1276992XP_557048.4 None

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