Protein Alignment Abca3 and snu

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: XP_061499479.1
• Gene: snu / 1274354
• VectorBaseID: AGAMI1_013702
• Length: 811
• Species: Anopheles gambiae
• Alignment Length: 848
• Identity: 195/848 - (22%)
• Similarity: 331/848 - (39%)
• Gaps: 181/848 - (21%)

  Fly   538 LQMRHLKKRFGNK----MVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIING 598
            :.:||..|.:|.|    .|:..|:|.:.:..|..|||.:|.||||.:|.:.|.....||...:.|
Mosquito    78 VSVRHAFKSYGTKKKPNQVLSNLNMTVAKGTIYGLLGASGCGKTTLLSCIVGRKRLNSGEIWVLG 142

  Fly   599 SDIRT---NIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELED 660
            ....|   .:.|||  :|..||...|:.|.|:...:.:|..:.|:....:.:.:...|..::|..
Mosquito   143 GKPGTKGSGVPGAR--VGYMPQEIALYGEFSIRETMMYFGWIFGMHTSEIVERLQFLLNFLDLPS 205

  Fly   661 KANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWD-LLQQEKVG-RTLLLT 723
            ::.:..: ||||.:|::|...||..|.::::.|||:.|:||..|:.:|: |:...|.| :|:::|
Mosquito   206 ESRLVKN-LSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQKTVIIT 269

  Fly   724 THFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYG-SGYRLICVK--RDDCETNEVTALLNKYI 785
            ||:::||. ....|.:|..|.|..:.:...|...|. |....:.:|  |...:.|...|.||
Mosquito   270 THYIEEAR-QAHTIGLMRSGRLLAEESPSCLLSMYRCSSLEDVFLKLSRKQGQANVAPAELN--- 330

  Fly   786 PGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQ----SDELHLNGYGVGITSMEEVFMKVGAE 846
                        :|..:..||.|     ||..::.    |.|..:  .|:.....:||.:
Mosquito   331 ------------ISNNISLSALA-----FGNKKDNPVYVSQESGV--VGLNFHQSKEVLI----- 371

  Fly   847 KDNTGNIKDQHEIMNGGSGFRGEDDNESVQSDGIFSENRRLLQGLQLLSNQWK--AMLLKKFLYT 909
            .|:.|:.    ..:||.:|......:::|:.|     |.....|....:::.|  |:|:|.||..
Mosquito   372 SDSNGST----IAINGLNGSAPGAISQAVECD-----NCTECSGCSNFTSKGKIRALLVKNFLRM 427

  Fly   910 WRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPI------TI----------SLTQYPLAVT 958
            |||..::|....:||..|::..|.|....|..::..:      ||          |.|.  |:..
Mosquito   428 WRNVGVMLFIFALPVMQVILFCLAIGRDPTNLKMAIVNGEMNSTIGADCAFDPGCSFTN--LSCR 490

  Fly   959 VLDRSNVQNGTGYEIANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRIN-SRYLVAAT 1022
            .|...|......|     |.||..:.|:.......|...|.|...|   .:..||. .|.....|
Mosquito   491 YLSHLNTTIVKEY-----YSDLDSALGAVRDGNAWGALYFTDNFTD---ALVARIALGRDADDET 547

  Fly  1023 ITESKITAWL---NNQALHTAPLTVNMVHNAIADKLFG--------SSVKIQVTNAPLPYTTSTL 1076
            :.:|:|..||   |.|........:.:.:...|.:|..        ..|.||. .||:
Mosquito   548 LDQSEIRVWLDMSNQQIGIMLNRDLQVAYREFAQQLLRVCDNNPKLGDVPIQF-KAPI------- 604

  Fly  1077 LSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQ---------FVGGVKVWTFW 1132
                     .||...|...|....|....:.||.....|.|.:::         :|.||......
Mosquito   605 ---------YGTNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERTEGLLDRSWVAGVTPSEIL 660

  Fly  1133 LSQFICDFASYIV----TALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFF 1193
            .|..|..|   :|    |||:::..||.|   |::..||:|...:|.:|.|...:.|.:::|
Mosquito   661 FSHVITQF---VVMCGQTALVLIFMIVVF---GVTNNGEIGWIVVLTILQGLCGMCFGFVIS--- 716

  Fly  1194 REPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNT 1258
                 ....:....|...:..|...:::|..::..:....:|.::       ||.:.|  ....|
Mosquito   717 -----AICELERNAIQLALGSFYPTLLLSGVIWPIEGMPLVLRYV-------SLCLPL--TLATT 767

  Fly  1259 ATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYM----AVTGVVFFLII--IVL 1317
            :.|:..|:                       .|   .::...|||    .:..:..||:|  :||
Mosquito   768 SLRSILAR-----------------------GW---SIMEPDVYMGFVSTIAWIALFLVITMLVL 806

  Fly  1318 EFR 1320
            :|:
Mosquito   807 KFK 809

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	195/848 (23%)
snu	XP_061499479.1	None