DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and osy

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_312290.4 Gene:osy / 1273324 VectorBaseID:AGAMI1_006800 Length:776 Species:Anopheles gambiae


Alignment Length:898 Identity:178/898 - (19%)
Similarity:335/898 - (37%) Gaps:257/898 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 KAFETEPEGKHIGLQ----MRHLKKRFGNK----MVVKGLSMNMFEDEITVLLGHNGAGKTTTIS 581
            |.|.::|....|..|    :|...|.:|.|    :::.||:|.:.:..|..|||.:|.||||.:|
Mosquito    32 KKFMSQPSTVAIRRQQAVCVRRAHKIYGTKKNPNVILDGLNMTVPKGSIYGLLGASGCGKTTLLS 96

  Fly   582 MLTGMFPPTSGTAIING---SDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGK 643
            .:.|.....||...:.|   ....:.:.|.|  :|..||...|:.|.::...:.:|..:.|:...
Mosquito    97 CIVGRRRLNSGEIWVLGGRPGSRGSGVPGPR--VGYMPQEVALYGEFTIRETLIYFGWIYGMTTD 159

  Fly   644 AVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLW 708
            .|:::.....|:::|.:.:....: ||||.:|::|:..||..:.::::.|||:.|:||..|:.:|
Mosquito   160 QVDEKTDFLCKLLQLPNASRFVKN-LSGGQQRRMSLAAALLNEPELLILDEPTVGVDPVLRQSIW 223

  Fly   709 D-LLQQEKVGR-TLLLTTHFMDE---ADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVK 768
            | |::..|.|. |:::|||:::|   |.|:|    :|..|:...:.:...|..||          
Mosquito   224 DHLVEITKSGNTTVIVTTHYIEETRQAHVIG----LMRGGKFLAEESPADLLAQY---------- 274

  Fly   769 RDDCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGI 833
              ..|:.|                |:..:||. |.:....:...:..::.|.          |.|
Mosquito   275 --QAESLE----------------DVFLKLSV-LQNMGKRRRSSIAQEVVEH----------VRI 310

  Fly   834 TSMEEVFMKVGAEKDNTGNIKDQHEIMNGGSGFRGEDDNESVQS---DGIFSE------------ 883
            .::....:.:..|:|        |..::|..|     ||.|:.|   |.:..|            
Mosquito   311 PAISNPALDLSPEED--------HGEISGEFG-----DNISMSSRGPDAVTPEIQAPPLPPEEDT 362

  Fly   884 NRRLLQGLQLLS-NQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILII-------KTQGTF 940
            ...|::.|:.:. |..:|::.|.||:.|||..::.....:||..:::....|       |.....
Mosquito   363 KTPLVEYLKFIKPNHMRALIWKNFLWMWRNVGVMAFIIGLPVAQIILFCWAIGHDPVGLKLAVAN 427

  Fly   941 QELKPITISLTQYPLAVTVLDRSNVQNGTGYEIAN-KYEDLAR-------------------SYG 985
            .||:....|....|          |..|..|.:.: :|.:..:                   |.|
Mosquito   428 YELEEAGYSFQDCP----------VYPGCNYSLLSCRYMEFLKNRSVVLELFSSESDALQQVSRG 482

  Fly   986 SNYGLELTGTQGFEDYIL---DLGKTI-QVRINSRYLVAATITESKITAWLNNQALHTAPLT--- 1043
            :.:| .|.....:.|.::   :.|:.: ...|:|..|.        :|..::||.:.|....   
Mosquito   483 NAWG-ALVFASNYSDSLVERTERGRDVDDFTIDSANLA--------VTMDMSNQQIGTLLYRDIQ 538

  Fly  1044 ---VNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGN---NLGTQLASNLCFCMCFVS 1102
               .:.:.|.:.|      .::..:|..:|:..:..:    .|:   |.....|..:...:.|..
Mosquito   539 YAYFDFIENILID------CEVNPSNGRIPFQWNKPV----YGDRKPNFTDFAAPGVILTIIFFL 593

  Fly  1103 SIYI---LFLIKERESRAK--LLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGL 1162
            |:.:   ..||:..|...:  |:..:.|:::           ..|::.|..:|    :|||..  
Mosquito   594 SVALTSGAMLIERNEGILERCLVSGITGIEI-----------LFSHVTTQFLV----MCFQTA-- 641

  Fly  1163 STFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFD 1227
                       |:::|.|:|      .:|..|........::|:...|||. |..||..|.:   
Mosquito   642 -----------LVMVFSFSV------FNLTNRGDIVWVILLTILTGLCGMC-FGFVVSCSCD--- 685

  Fly  1228 TKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYF--- 1289
                                         |..:....|....||.::||.::.....:.|..   
Mosquito   686 -----------------------------NERSATYMAMGSFLPIVMLCGIIWPIEGMHPLVRVF 721

  Fly  1290 -------------------AW--EEPGVLPETVYMAVTGVVFFLI-IIVLEFR 1320
                               .|  |:|.|.......|:..|:|..| |::|:|:
Mosquito   722 SVFLPLTKSTESLRSILQRGWLIEDPNVYIGFASTAIWIVIFLTISILLLKFK 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 178/898 (20%)
osyXP_312290.4 CcmA 51..286 CDD:440746 69/269 (26%)
YadH 577..772 CDD:440604 44/261 (17%)

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