DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and LOC1272631

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_061516267.1 Gene:LOC1272631 / 1272631 VectorBaseID:AGAMI1_002778 Length:1993 Species:Anopheles gambiae


Alignment Length:2116 Identity:531/2116 - (25%)
Similarity:879/2116 - (41%) Gaps:567/2116 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVD-------TEQKGVRYYNEQNLTDLNLLQ 71
            |.:|:.|:.....:.:.|:.||......|::::.|:.       ||.:|.          ..|.:
Mosquito    19 LVRNFKLKIRDSRKTIAEVFLPLYTLGTLIVLKILIPNPNFPAITEPRGA----------ATLFE 73

  Fly    72 HSLHRSSYLGKLIALIAPN-----------------RRRKNGGFSKFEFILCYSPVNPVLKKLVE 119
            |..|..::  .:..|..||                 .||...|....::::..:|     ::|:.
Mosquito    74 HFQHHKAH--TIAVLPQPNSSTTIPFLSEVNELWMSNRRHQPGIHPIKWMVYETP-----EELLA 131

  Fly   120 EAWQSLGKNKICESENATQLELDTVSKNAFAGVQFDDAWANLTENDPL---------PNDFHFAL 175
            ..|:.                   .||...|.:...|        |||         .|...|..
Mosquito   132 AYWRD-------------------PSKMPLALIFHSD--------DPLFGPLRYEIRTNPSFFVT 169

  Fly   176 RFPAELRTATIAIANT---WLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYL 237
            ....||.::.:....:   |..:....|.| :.|.|:          |...||:.||..|....:
Mosquito   170 PSTTELYSSLVTCRQSDSYWSAVIPIETGD-SCPVNQ----------YYYSGFVALQTLLDYTKI 223

  Fly   238 R--QKSGEQDLPNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLK 300
            |  .::.|..:|::.::.:|..||..:.:: ....::.:.::::.....||:...|..|||..:|
Mosquito   224 RIVTQNEELQIPHITLEMFPKEAYTGNWMV-AFRLVIPIYMVMALSQFITYLLILIVGEKENHIK 287

  Fly   301 EVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVS 365
            |.:|||||.:.:.|..||:...:.:|..:.:..|||     ..:.|..|.|:..:...:::|..|
Mosquito   288 EGLKIMGLRDSVFWCGWFIIYAVFVTFLSFVSVILV-----FSLGVFQHTNYLPVFILILLYSFS 347

  Fly   366 SICFCFMMATFFSRASTAAA-------VTGLIWFIAYIPYSFTINSYDDLSLSSKLGW--SLISN 421
            .|...||:..||..:.||..       :..|::|:...        .||...|:.| |  ||||.
Mosquito   348 VILIGFMITPFFDNSRTAGILGNFAVNIMSLLYFLQVF--------IDDTHTSAAL-WTVSLISP 403

  Fly   422 TAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGS 486
            |.....:..||..:.:|:|:...|.:|...:    .:|..::|::|..::|..:..|.:.|:|..
Mosquito   404 TGFALAMDKILVLDISGQGVTLHNLWTGPGI----PIGGSILMLVVDILLYAALAFYFDCVIPSD 464

  Fly   487 FGVPRPWNFPFTREFWCGEREYTGVEDIP--NGHV----------EQRDPKAFETEPEGKHIGLQ 539
            .|..:...|.|.|.:||.::    |..:|  ||..          :.||.:....|..||. .::
Mosquito   465 HGTKQRPCFCFNRNYWCKKK----VPKVPLLNGESANSFNNALEDQARDVEPVSREMRGKE-AIR 524

  Fly   540 MRHLKKRFGN-----KMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGS 599
            :..|.|.|.:     ...|.|:::.::|.:||.:||||||||:|..::|||:..|||||..|.|.
Mosquito   525 IVDLYKTFHSCRKPAVNAVNGINLTIYEGQITAILGHNGAGKSTLFNILTGLTSPTSGTIYIFGY 589

  Fly   600 DIR--TNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKA 662
            |:|  .::...|...|:||||::||:.::...|:.||:.::|:....|:.||.|.|:.|:|.|.|
Mosquito   590 DVRDPNDMTMIRRMTGVCPQHDILFETLTPKEHLYFFAAVRGIPPSLVDSEVKKTLRDIDLFDTA 654

  Fly   663 NVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFM 727
            ......||||.||||||..|:.||.|:::.|||::|:||.:||.:|.:||..|.|:.:|||||||
Mosquito   655 ETRVKHLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRHMWSILQNRKHGKVILLTTHFM 719

  Fly   728 DEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRL-ICVKRDDCETNEVTALLNKYIPGLKPE 791
            ||||:|.:|.|::..|.|:|.|:|.|||.::|.||.| :.:..:.|||: :|.|:|.::|..:..
Mosquito   720 DEADILAERKAVVSRGRLRCCGSSLFLKNKFGIGYHLTLVLDTNACETS-ITKLVNDHVPQAEKA 783

  Fly   792 CDIGAELSYQLPDSASAKFEEMFGQLEEQSDE----LHLNGYGVGITSMEEVFMKVGAEKDN--- 849
            ...|.||||.||..|...|..:|..:|::...    |.:..|||.:|::||||:.:..:::.   
Mosquito   784 RRHGRELSYILPHDAVNSFVSLFDDIEKEIKTKRMMLGICSYGVSMTTLEEVFLHLETQREGEQK 848

  Fly   850 ---TGNIKDQHEIMNGGSGFRGEDDNESVQSDGI-FSEN--RRLL--QGL-------------QL 893
               ||..:|:..        .||:|.|..|:.|. .|||  |:::  :||             |.
Mosquito   849 AGATGEGEDEEG--------EGEEDEEDGQASGYPVSENLSRKVMKTRGLPRSLSLQERSNSYQS 905

  Fly   894 LSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQYPLAV- 957
            |.|..|.:|.::   ...||..|  |:....|..::.|..:.:.|..|.    |.....:|::: 
Mosquito   906 LKNDTKTLLDEQ---NTDNKASL--QDNRMQFDTIIPINGLGSDGVSQG----TAGSGTHPVSMG 961

  Fly   958 ---------TVLDRSNVQ------------NGTGYEIANKYEDLARSYGSNYGLEL-----TGTQ 996
                     :.::...||            ||......:.|||..:::||...::|     |...
Mosquito   962 GGGVGCGQNSTVNSPQVQRIHRKKHHRSSRNGVSKSTKSVYEDQTQTHGSASAVKLNSQNRTNWM 1026

  Fly   997 GFEDY------------ILDLGKTIQVR-INSRYLV----------------------------- 1019
            ..:|.            :|.|..||..| |...||:                             
Mosquito  1027 DLDDIPLYPSRWSTIGALLKLRLTILFRDIQRLYLLIILPLAFTALGLYLNSIQVLSPIMRSILL 1091

  Fly  1020 ----------------------------------------------------------------- 1019
                                                                             
Mosquito  1092 DNTTYGSNITKIAIHDNTNPAVWSHAAYLYHHHHQPKQQKRESQKHYDPIPQFLHQKHHQQQQQS 1156

  Fly  1020 ----------------AATITES----------------------------KITAWLNNQALHTA 1040
                            :|.:||.                            .||...|:...|:.
Mosquito  1157 KEAAHLYRRFLSELHRSANVTEDFSGNFSSLLDIAPHMAAFNVNVISWSNVSITTLYNDTTQHSL 1221

  Fly  1041 PLTVNMVHNA---IADKLFGSSVKIQ----------------VTNA------------------- 1067
            |:.:|::.|.   :..:|..:::..|                .:||                   
Mosquito  1222 PIILNLISNTLLRVYAELSPATINSQHLLYQRAGGGRKGPAPTSNAQSTFDYQDDAADGETLDDI 1286

  Fly  1068 ---PLPYTTSTLLSQLSTGN------------------------------NLGTQLASNLCFCMC 1099
               |||.:||...:..::|:                              |:|| .:|.|     
Mosquito  1287 AFQPLPSSTSFSTTSSTSGSAAPDRSSSDSILRIELWSHPFQQTAQPQEFNIGT-FSSAL----- 1345

  Fly  1100 FVSSIYILF-------LIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCF 1157
            ||..|::|.       ::.:||.:||....|.|:....:..:.||      :::.|::||   |.
Mosquito  1346 FVGMIFVLIPVSLAVDMVYDREMKAKNQLRVNGLSSSLYLSAYFI------VLSGLMLVI---CA 1401

  Fly  1158 QETGLSTFGELGRYYLLLLLFGFAVLPFIY---------IMSLFFREPATGFARVSIVNI--FCG 1211
            ...||....::..:.....|....:|.|:|         ..|.||  ..|..|:..:.||  |.|
Mosquito  1402 ALLGLVFIFDIPSFRQPPALITLGMLVFLYSPAGILCSTCFSYFF--DRTDSAQSILPNILTFVG 1464

  Fly  1212 MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLC 1276
            :..||:||.:.....:.| .|..|.::|.:         :|.:|...||.....:.     .:.|
Mosquito  1465 LIPFILVVFLDMLGIEVK-AAIALHYVFSL---------INPMYIPYATVYFVDRV-----YIAC 1514

  Fly  1277 ELVPQCCNLK-PYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELM---FKIRQLISKPP 1337
            .|...|..|. .::..||       |.:...|.:..:.|.....| ::::|   .::|.|..:..
Mosquito  1515 RLSSACAELSMAHYMTEE-------VIVMACGCLLHIPIWAFCLR-VSDVMKSGGRMRDLFHRSA 1571

  Fly  1338 PPP---TEGQL-----DDDVANERERILQMSSN---------ELATKNLVLDRVTKYYGQ----- 1380
            ...   ||.|.     |:||.|||.|:.:::||         .||...:::..:.|.:.|     
Mosquito  1572 SEEDVMTEEQCTGEYEDEDVRNERSRVFRLTSNPQQSQQEEGPLAQPVVLVKSLRKEFSQESLCG 1636

  Fly  1381 -------------FMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSL 1432
                         .::|..:|:.|...|..||||.||||||||.|:|||:...:.|...|.|.|:
Mosquito  1637 NCCCCADDELPKKKVSVRSLSIGVDAGEVLGLLGHNGAGKTTTMKIMTGETAPTRGTVRVAGHSI 1701

  Fly  1433 ESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQT 1497
            ..|.:..:|.:|||||.|||..::|.||.|.::..:|||:...:.:|...........:|.:|||
Mosquito  1702 TINQDDAFKTLGYCPQHDALWKNVTVREHLELYARIRGVRGKDLNRLISTYLTGLHINEHANKQT 1766

  Fly  1498 HAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEEC 1562
            ...|||.:||||.|:|::|:|.|:.||||:|||||.::|.||:.:.......:..:||:|||||.
Mosquito  1767 QHCSGGTRRKLSYAMAMVGAPKVVLLDEPSTGMDPKSKRFLWDTILASFHGKRCAMLTTHSMEEA 1831

  Fly  1563 EALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPA 1627
            :|||:|:.|||.||.:|:||||||||.:..|..|:||::         .:...|:..|.|....:
Mosquito  1832 DALCSRVGIMVKGELRCLGSTQHLKNLYGAGYTLEIKLK---------HIENVYSETPIESQPSS 1887

  Fly  1628 QMSQRDID-------------------AVKEFVETEYPNSILQEEYQGILTFYIPLTGV-KWSRI 1672
            ...|..:|                   |::.||...:|::.|:|.:...|.:.:|...| ..:..
Mosquito  1888 SQEQLQLDQSTDHIAPVISNCIDNRSMALRNFVTDLFPSATLEESFADRLVYSVPQQAVSSLAEC 1952

  Fly  1673 FGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRE 1708
            |..:|..:.:|::|:||.||||||::||:||.|..|
Mosquito  1953 FSRLEKAKTELDIEEYSFSQTTLEQVFLKFAHYDEE 1988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 507/1967 (26%)
LOC1272631XP_061516267.1 None

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