DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and ABCA10

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_525021.3 Gene:ABCA10 / 10349 HGNCID:30 Length:1543 Species:Homo sapiens


Alignment Length:1580 Identity:441/1580 - (27%)
Similarity:750/1580 - (47%) Gaps:235/1580 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 YLREGFLPLQHSLSMAYLR---QKSGEQDLPNVVMKRYPFPAYIFDPLLEGMSSIMS-------L 274
            |..:||:..|.:::.|.:.   ..|..::|.:|:......|.:|      ....||:       |
Human    83 YWLKGFVAFQAAINAAIIEVTTNHSVMEELTSVIGINMKIPPFI------SKGEIMNEWFHFTCL 141

  Fly   275 IILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKIN 339
            :...||||   :.:..:..|:.| .|::|.:|||.....|.:|.:.....:.|.:|.:|:::   
Human   142 VSFSSFIY---FASLNVARERGK-FKKLMTVMGLRESAFWLSWGLTYICFIFIMSIFMALVI--- 199

  Fly   340 WSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINS 404
              ..:.::.|..|..:.....:|.:|.|...|:|:... |....|.:.|.::.:.:....||: .
Human   200 --TSIPIVFHTGFMVIFTLYSLYGLSLIALAFLMSVLI-RKPMLAGLAGFLFTVFWGCLGFTV-L 260

  Fly   405 YDDLSLSSKLGW--SLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLV 467
            |..|.||  |||  ||:|..|...|:..|...:....|:     ..|....|:..:.|...::..
Human   261 YRQLPLS--LGWVLSLLSPFAFTAGMAQITHLDNYLSGV-----IFPDPSGDSYKMIATFFILAF 318

  Fly   468 SCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIPNG-HVEQRDPKAFE-TE 530
            ..:.|:|..||.|:|:|...|......|.....|| .:.:.|..|...|. :.|.....:|| ..
Human   319 DTLFYLIFTLYFERVLPDKDGHGDSPLFFLKSSFW-SKHQNTHHEIFENEINPEHSSDDSFEPVS 382

  Fly   531 PE--GKHIGLQMRHLKKRFGNKM----VVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPP 589
            ||  ||. .:::|::.|.:..|.    .::|:..:::|.:||.:||||||||:|.:::|:|:...
Human   383 PEFHGKE-AIRIRNVIKEYNGKTGKVEALQGIFFDIYEGQITAILGHNGAGKSTLLNILSGLSVS 446

  Fly   590 TSGTAIINGSDIR--TNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKY 652
            |.|:|.|..:.:.  |::|..|.::|.|||.|..||.::|..::|.|:::||::.|.|||||.:.
Human   447 TEGSATIYNTQLSEITDMEEIRKNIGFCPQFNFQFDFLTVRENLRVFAKIKGIQPKEVEQEVKRI 511

  Fly   653 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVG 717
            :..::::...::.:.|||||.||||::..|:.||.:|:|.|||::|:||.:|.::|.||::.||.
Human   512 IMELDMQSIQDIIAKKLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPFSRHRVWSLLKEHKVD 576

  Fly   718 RTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLN 782
            |.:|.:|.||||||:|.||...:.:|:|||.|:|.|||:::|.||.|...:.:.|:|.::|:|:.
Human   577 RLILFSTQFMDEADILADRKVFLSNGKLKCAGSSLFLKRKWGIGYHLSLHRNEMCDTEKITSLIK 641

  Fly   783 KYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGA-- 845
            ::||..|...:...:|.|.||...:.||.:::..|::.||: .:..|.|.:||:.|||:.:..  
Human   642 QHIPDAKLTTESEEKLVYSLPLEKTNKFPDLYSDLDKCSDQ-GIRNYAVSVTSLNEVFLNLEGKS 705

  Fly   846 ---EKD-NTGNIKDQHEIMNGGSGFRGEDDNESVQSDGIFSENRRLLQGLQLLSNQWKAMLLKKF 906
               |.| :.|..:..|...|.|      |::|..|......|.|:.:....|...|..|:...:|
Human   706 AIDEPDFDIGKQEKIHVTRNTG------DESEMEQVLCSLPETRKAVSSAALWRRQIYAVATLRF 764

  Fly   907 LYTWRNK----LLLLIQNIMPVFFVVVTILIIKTQGTF-QELKP--ITISLTQYPLAVTVLDRSN 964
            |...|.:    .|||:..|..:..::..|:...|:.|. .|..|  ..:||.|.|  .|.|....
Human   765 LKLRRERRALLCLLLVLGIAFIPIILEKIMYKVTRETHCWEFSPSMYFLSLEQIP--KTPLTSLL 827

  Fly   965 VQNGTGYEIANKYEDLARSYGSNYGLELTGTQGFEDYILDL------GKTIQVRINSRYLVAATI 1023
            :.|.||..|    |||..|...            :|.:|::      ..:.....|...:|:...
Human   828 IVNNTGSNI----EDLVHSLKC------------QDIVLEIDDFRNRNGSDDPSYNGAIIVSGDQ 876

  Fly  1024 TESKITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGT 1088
            .:.:.:...|.:.|:..|:.:.:|.||:.. :|..:..||:        .||..|:.....:|| 
Human   877 KDYRFSVACNTKKLNCFPVLMGIVSNALMG-IFNFTELIQM--------ESTSFSRDDIVLDLG- 931

  Fly  1089 QLASNLCFCMCFV-SSIYILFL------------IKERESRAKLLQFVGGVKVWTFWLSQFICDF 1140
                       |: .||::|.:            |.:.:...:...::.|:....:|..|.:.|.
Human   932 -----------FIDGSIFLLLITNCVSPFIGMSSISDYKKNVQSQLWISGLWPSAYWCGQALVDI 985

  Fly  1141 ASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAV-LPFI-YIMSLFFREPATGFARV 1203
            ..|.: .|..:..|..|...|.....|| .:.|::.:.|.|| |.|: |::|..||:....    
Human   986 PLYFL-ILFSIHLIYYFIFLGFQLSWEL-MFVLVVCIIGCAVSLIFLTYVLSFIFRKWRKN---- 1044

  Fly  1204 SIVNIFCGMALFIVVVVMSSELFDT--KDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAK 1266
               |.|.....||:::.:|:.:..|  :....||..||  .|.|:|...:..:......||..:.
Human  1045 ---NGFWSFGFFIILICVSTIMVSTQYEKLNLILCMIF--IPSFTLLGYVMLLIQLDFMRNLDSL 1104

  Fly  1267 AGAL----PPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELM- 1326
            ...:    ..|||..|:|.                       :..|:|..:|..||.:..||:| 
Human  1105 DNRINEVNKTILLTTLIPY-----------------------LQSVIFLFVIRCLEMKYGNEIMN 1146

  Fly  1327 ----FKI----RQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRV-------TK 1376
                |:|    |:....|..|..|   |:||..||.:    ::|.|...||..:.|       .:
Human  1147 KDPVFRISPRSRETHPNPEEPEEE---DEDVQAERVQ----AANALTAPNLEEEPVITASCLHKE 1204

  Fly  1377 YY----------GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQG-- 1429
            ||          .:.:|:..||.||::.|..||||.|||||:|:.||:||..:.::|...:||  
Human  1205 YYETKKSCFSTRKKKIAIRNVSFCVKKGEVLGLLGHNGAGKSTSIKMITGCTKPTAGVVVLQGSR 1269

  Fly  1430 LSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGV-QESRIRQLSEDLAKSFGFMKHI 1493
            .|:....::..|.:|||||.::|...||.:|.|.::..::|: :|.....:|. |.::....:.:
Human  1270 ASVRQQHDNSLKFLGYCPQENSLWPKLTMKEHLELYAAVKGLGKEDAALSISR-LVEALKLQEQL 1333

  Fly  1494 DKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSH 1557
            .......|.|.||||...::::|:|||:.||||.|||||..::|:|.:: ..:::..:..:||:|
Human  1334 KAPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPFTGMDPEGQQQMWQILQATVKNKERGTLLTTH 1398

  Fly  1558 SMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDE 1622
            .|.|.||:|.|:|:||:|..:||||.|||||||.:..:|:||::.                    
Human  1399 YMSEAEAVCDRMAMMVSGTLRCIGSIQHLKNKFGRDYLLEIKMKE-------------------- 1443

  Fly  1623 QTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGV-KWSRIFGLMESNRDQLNVE 1686
               |.|:.....:.:|.|     |.:..||.|..::.:.:|:..| ..||.|..:|:.:...|:|
Human  1444 ---PTQVEALHTEILKLF-----PQAAWQERYSSLMAYKLPVEDVHPLSRAFFKLEAMKQTFNLE 1500

  Fly  1687 DYSVSQTTLEEIFLEFAKYQ 1706
            :||:||.|||::|||..|.|
Human  1501 EYSLSQATLEQVFLELCKEQ 1520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 441/1580 (28%)
ABCA10NP_525021.3 rim_protein <37..1520 CDD:130324 440/1578 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1153..1177 8/26 (31%)

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