DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and LOC101883122

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_073763802.1 Gene:LOC101883122 / 101883122 -ID:- Length:2232 Species:Danio rerio


Alignment Length:1876 Identity:589/1876 - (31%)
Similarity:918/1876 - (48%) Gaps:381/1876 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 NPVLKKLVEEAWQSLGKNKIC---------ESE--------------NATQ------------LE 140
            ||||..::::..::.|.:...         |||              |||.            .:
Zfish   441 NPVLAVVLDQTLENTGFSSAVISNFLFNGPESERPAGMPSFDWRNVFNATSQSAQQLTQILKCFD 505

  Fly   141 LD---TVS------KNAFAGVQFDDAWANLT------ENDPL-PNDFHFALRFPAELRTATIAI- 188
            ||   :||      ..|.|.:..|..||.|.      ..||. |....:.:|...:....|..: 
Zfish   506 LDKFASVSTEALLVNQALALLDLDRFWAGLVFTDLGDPGDPQPPTHIRYKIRMDVQDTERTDKLK 570

  Fly   189 ANTWL-TMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMK 252
            ..:|. |.|..|..||.               |:|.||:.||..:..|.::.::|.|....|..:
Zfish   571 ERSWSPTARDNPLNDLR---------------YVRGGFVYLQDMVDRAIIKLQTGVQQTLGVYAQ 620

  Fly   253 RYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAW 317
            :.|:|.|:.|..|..::..:.|.:.|::|:....|.|.:..|||.:|||.:::|||.:..:|.:|
Zfish   621 QMPYPCYMDDAFLRSLTRSLPLYMTLAWIFSVALIVKGVVQEKEARLKETVRMMGLKSSTYWLSW 685

  Fly   318 FVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRAST 382
            .:.|.:.|.:||.|:.:::|..     .||.:::.:.:..||:::.::::..||.::.|||||:.
Zfish   686 AISSTLPLAVSAALLTLILKYG-----KVLRYSDPSVIFVFLLVFCLATVMQCFFISVFFSRANL 745

  Fly   383 AAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFF 447
            |||..||::|:.|:|:.......|.|...:|:..||:|..|.|:|.:....:|..|.|:||||..
Zfish   746 AAACGGLLYFLLYLPHVLCYAWRDVLGFGAKIATSLLSCVAFGYGCENFSTYEAQGVGIQWSNIR 810

  Fly   448 TPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVE 512
            :....:|..:....:.|||...:||..:..|:|.|.||.:|:.:||.||||..:|||.|  .|.:
Zfish   811 SSPQDNDRYSFIVSIFMMLFDALIYWTLTWYIENVYPGQYGIAKPWYFPFTSSYWCGSR--VGSD 873

  Fly   513 DIPNGHVEQRDPKAF-ETEPEGKHIGLQMRHLKK--RFGNKMVVKGLSMNMFEDEITVLLGHNGA 574
            ..|:...:..:...| |..|.|...|:.:|:|.|  :.|||:.|.|||::.::|.||..||||||
Zfish   874 GHPDLLQDLENQSGFLEKPPSGLKPGVCIRNLVKVYKTGNKLAVDGLSLDFYQDHITSFLGHNGA 938

  Fly   575 GKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKG 639
            |||||:|:|||:|.||||||.|||.||||:::..|..||:|||||||||:::|..||.|::|:||
Zfish   939 GKTTTMSILTGLFAPTSGTAYINGYDIRTDMDCIRKQLGMCPQHNVLFDDLTVEEHIYFYARLKG 1003

  Fly   640 LRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSAR 704
            ...|.|::|:.:.:|.:.|..|....:..|||||:|||||..|..|.:.||:.|||::|:||.||
Zfish  1004 RSSKEVKKEIDQMIKDVGLPHKRKDLAKNLSGGMQRKLSVAIAFVGGSNVVILDEPTAGVDPYAR 1068

  Fly   705 RQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLI---- 765
            |.:|:||.:.|.|||::|:||.|||||:||||:||:..|.::|.|:|.||||.||.||.|.    
Zfish  1069 RGIWELLLKYKQGRTIILSTHHMDEADILGDRVAIISHGRVQCCGSSLFLKKTYGRGYYLTIARA 1133

  Fly   766 --------CV---------------------KRDDCETNEVTALLNKYIPGLKPECDIGAELSYQ 801
                    ||                     ..|..:.::|:.|:.:::|..:....:|.||.|.
Zfish  1134 NQERAPAQCVPSPEEFDQSSLDEGICSDSISSLDPPDVSDVSRLVRRHVPEAEFLEAVGQELVYV 1198

  Fly   802 LPDS--ASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTG------------- 851
            ||.|  .:..|..:|.:|:.:.:.|.:..||:..||:||:|:||.   ::||             
Zfish  1199 LPYSGATNGSFATLFKELDLEKNTLGVTSYGISDTSLEEIFLKVA---EDTGVDVESHDKPKQKP 1260

  Fly   852 ----------------NIKDQHEIMNGGS---GFRGEDDNESVQSDGIFSENRRLLQGLQLLSNQ 897
                            ..:|...:.|...   ..|.||.:..:.::|..|:   ::.|..|:..|
Zfish  1261 RSSSRISGKQSISSALECRDAKTVKNEAKVRFASRVEDTHRPMCANGKGSD---VINGWSLIRQQ 1322

  Fly   898 WKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTI---LII-----------------KTQGTFQ- 941
            :.|:.:|:|.:..|::..::.|.:||.|||.:.:   ||:                 ..|.||. 
Zfish  1323 FLALFIKRFHHARRSRKGIIAQVVMPAFFVCLALIFSLIVPPFNEYPSLELQPWMYGAPQNTFYS 1387

  Fly   942 -------ELKPITISLTQYPLAVT--------------------------------VLDRSN--- 964
                   :::.:|.:|...|...|                                :.|:.|   
Zfish  1388 FDGPGVVQVEKVTNALLNSPGFGTRCMSTNPIPKLPCVSTGSTNWFTPAVDPSISDIFDKGNWTM 1452

  Fly   965 ----------------------------------------VQNGTGYEIANKYEDLARSYGSN-- 987
                                                    :||.||   .|..:.|.::|..:  
Zfish  1453 QNPSPACQCSTAERSFMLPDCPPGAGGLPPPQRTQNTTDTLQNVTG---RNMTDFLLKTYQKSGK 1514

  Fly   988 --YGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATI--------------------------- 1023
              ||....|           |...|||:|...:.|...                           
Zfish  1515 IRYGGFSVG-----------GVNSQVRLNESDITALVSDLRSVFNISQFKQSEDIFQAIRLFLLE 1568

  Fly  1024 --TESKITAWLNNQALHTAPLTVNMVHN-AIADKL--------FGSSVKIQVTNAPLPYTTSTLL 1077
              |...:..|..|...|:....:|:..| |:...|        :|    |...|.||..|...|.
Zfish  1569 LGTRDNMKVWFYNPGWHSLVSFLNVASNGALRGNLPAGRRPEDYG----ITTFNHPLNLTREQLS 1629

  Fly  1078 SQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFAS 1142
            :.....::....:|..:.|.|.|:.:.::||||:||.::||.||||.||....:||:.|..|..:
Zfish  1630 TAALASSSTDVVVAICVIFAMSFIPASFVLFLIQERVTKAKHLQFVSGVNPTIYWLANFAWDMCN 1694

  Fly  1143 YIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVN 1207
            |||..:||:|..:|||:....:...|....|||.|:|:::.|.:|..|..|..|:|.:..::.:|
Zfish  1695 YIVPCVIVIIIFLCFQQKSYVSPPNLPALILLLALYGWSITPMMYPFSFVFSVPSTAYVVLTCIN 1759

  Fly  1208 IFCGMALFIVVVVMSSELFDTKDTA---DILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGA 1269
            :|.|:...:...||  ||||..:..   ||:.....:||||.|...|..:..|.|........|.
Zfish  1760 LFIGINGSVATFVM--ELFDDPNITRINDIVKQALLVFPHFCLGRGLMDMAKNQAVATLYQNLGE 1822

  Fly  1270 ---LPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQ 1331
               :.|:                .|...|  .....|::.|.|.|.:.::::::    ...|.|.
Zfish  1823 DRFVNPL----------------TWNMVG--KNLFAMSIQGAVMFAVTLLIQYK----FFCKPRS 1865

  Fly  1332 LISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLV-LDRVTKYYGQFM--AVNQVSLCVQE 1393
            :.|   |..:..:.|:|||.||||:.    |..|.|:|: :..:||.|.:.:  ||:::.:.|..
Zfish  1866 VKS---PFTSSAEEDEDVARERERVY----NGGAQKDLLHICDLTKMYRKKLTPAVDKICVGVPA 1923

  Fly  1394 VECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTG 1458
            .|||||||:|||||||||||:|||.|.::|.|::.|.|:.|.|..:.:.:||||||||:.|.|||
Zfish  1924 GECFGLLGINGAGKTTTFKMLTGDIRPTAGDAFINGYSIRSEMQQVQQNMGYCPQFDAIDDLLTG 1988

  Fly  1459 REVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYL 1523
            ||.|:.:..||||.|:.:..::|...:..|.:|:.:|....||||||||||||:|:||.|.:|:|
Zfish  1989 REHLQFYARLRGVPEAEVAMVAEWGIQKLGLVKYSEKSAGTYSGGNKRKLSTAMALIGCPPLIFL 2053

  Fly  1524 DEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKN 1588
            |||||||||.|||.||:.:..:...|:|::|||||||||||||||:||||||:|:|:||.||||:
Zfish  2054 DEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGQFQCLGSIQHLKS 2118

  Fly  1589 KFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEE 1653
            :|..|..|.::|..::.                           |:||::.||:..:|.|:|:|:
Zfish  2119 RFGDGYTLIVRVCADVS---------------------------DLDALETFVKETFPGSVLKEK 2156

  Fly  1654 YQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709
            :...|.:.||......:.||..:.:::..|.|||||||||||:::|:.||:.||::
Zfish  2157 HHNTLQYQIPPADGALTHIFSQLSTHQHTLRVEDYSVSQTTLDQVFVSFARQQRDE 2212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 578/1824 (32%)
LOC101883122XP_073763802.1 None

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