Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746716.1 | Gene: | abca2 / 100498548 | XenbaseID: | XB-GENE-969968 | Length: | 2496 | Species: | Xenopus tropicalis |
Alignment Length: | 2044 | Identity: | 610/2044 - (29%) |
---|---|---|---|
Similarity: | 934/2044 - (45%) | Gaps: | 525/2044 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 LGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEA----------------WQSLGK- 127
Fly 128 ---------------------------------------NKICESE----NATQL--ELDT---- 143
Fly 144 ----------VSKNAFAGVQFDDAWANLTEND--------------------PLPNDFHFALRFP 178
Fly 179 AELRTATIAIANT-WLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSG 242
Fly 243 EQDL-PNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIM 306
Fly 307 GLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCF 371
Fly 372 MMATFFSRASTAAAVTGLIWFIAYIPYSFTI----NSYDDLSLSSKLGWSLISNTAMGFGIKLIL 432
Fly 433 GFEGTGEGLQWSNFF-TPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFP 496
Fly 497 FTREFWCGEREYTGVEDIPNGHVE--------QRDPK----------AFET---------EPEGK 534
Fly 535 HIGLQ--MRHLKK--RFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAI 595
Fly 596 INGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELED 660
Fly 661 KANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTH 725
Fly 726 FMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDD--------------CETNE 776
Fly 777 VTALLNKYIPGLKPECDIGAELSYQLPDSASAK--FEEMFGQLEEQSDELHLNGYGVGITSMEEV 839
Fly 840 FMKVGAE----KDNTGNIKDQHEIM-------NGGSG---------------------------- 865
Fly 866 ------------FRGEDDNESVQSDGIFS---------ENRRL-----------------LQGLQ 892
Fly 893 LLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQY---- 953
Fly 954 ------------------------------------PLAV-----------TVLDR----SNVQN 967
Fly 968 GTGYEIANKY---------------------------------EDLARSY--------------- 984
Fly 985 ---------------------GSNYGLELTGTQGFEDYILDLGKTIQVRINSR----YL------ 1018
Fly 1019 -------------VAATITES----------KIT------AWLNNQALHTAPLTVNMVHNAI--- 1051
Fly 1052 ---ADKLFGSSVKIQVTNAPLPYTTSTL-LSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKE 1112
Fly 1113 RESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLL 1177
Fly 1178 FGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELF----DTKDTADILGWI 1238
Fly 1239 FRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYM 1303
Fly 1304 AVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDD---DVANERERILQ-MSSNEL 1364
Fly 1365 ATKNLVLDRVTKYY-----GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGA 1424
Fly 1425 AYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGV----QESRIRQLSEDLAK 1485
Fly 1486 SFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGK 1550
Fly 1551 SIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGG 1615
Fly 1616 YARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNR 1680
Fly 1681 DQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 67/183 (37%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 76/210 (36%) | ||
CcmA | 538..843 | CDD:224054 | 148/324 (46%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 114/220 (52%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 116/576 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 126/226 (56%) | ||
drrA | 1376..1702 | CDD:130256 | 151/334 (45%) | ||
abca2 | XP_031746716.1 | rim_protein | 1..2430 | CDD:130324 | 610/2044 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 160 | 1.000 | Domainoid score | I3998 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.930 |