Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031750505.1 | Gene: | abca9 / 100496782 | XenbaseID: | XB-GENE-6464273 | Length: | 1608 | Species: | Xenopus tropicalis |
Alignment Length: | 1838 | Identity: | 458/1838 - (24%) |
---|---|---|---|
Similarity: | 829/1838 - (45%) | Gaps: | 373/1838 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAKVTNWDKFVLLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLT 65
Fly 66 DLNLLQHSLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKI 130
Fly 131 CESENATQLELDTVSKN-AFAGVQFDDAWANLTENDPLPNDFHFALRF-----PAELRTATIAIA 189
Fly 190 NTWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMKRY 254
Fly 255 PFPAYIFDPLLEGMSSIMS------------LIILLSFIY--PCTYI------TKYITAEKEKQL 299
Fly 300 KEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIV 364
Fly 365 SSICFCFMMATFFSRASTAAAVTGLIWFIA-YIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGI 428
Fly 429 KLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPW 493
Fly 494 NFPFTREFW--------CGEREYTG-------VEDIPNGHVEQRDPKAFETEPEGKHIGLQMRHL 543
Fly 544 KKRFGNK----MVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIING---SDI 601
Fly 602 RTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVAS 666
Fly 667 SKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEAD 731
Fly 732 VLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGA 796
Fly 797 ELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKD-QHEIM 860
Fly 861 NGGSGFRGEDDNESVQSDGIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVF 925
Fly 926 FVVVTILIIKTQGTFQELKPITISLTQYPLA-VTVLDRSNVQN--------------GTGYEIAN 975
Fly 976 KYEDLARSYGSNYGLELTGTQGFEDYILDLG----KTIQVRINS--------RYLVAATITESK- 1027
Fly 1028 ---ITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQ 1089
Fly 1090 LASNLCFCMCFVSSI---YILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVV 1151
Fly 1152 ITIVCFQETGLSTFGELGRYYLLLLL-----------FGFAVLPFIYIMSLFFREPATGFARVSI 1205
Fly 1206 VNIFCGMALFIVVVVMSSELFDTKDTADILGWIF---RIFPHFSLAMSLNKVYTNTATRNACAKA 1267
Fly 1268 GALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFR-----LINELMF 1327
Fly 1328 KI--RQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKN------LVLDRVTKYY-----G 1379
Fly 1380 QFM------AVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNS 1438
Fly 1439 IYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGG 1503
Fly 1504 NKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSHSMEECEALCT 1567
Fly 1568 RLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQR 1632
Fly 1633 DIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVK-WSRIFGLMESNRDQLNVEDYSVSQTTLE 1696
Fly 1697 EIFLEFAKYQ-REDTRAN 1713 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 39/200 (20%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 46/226 (20%) | ||
CcmA | 538..843 | CDD:224054 | 115/311 (37%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 89/223 (40%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 79/450 (18%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 80/229 (35%) | ||
drrA | 1376..1702 | CDD:130256 | 110/338 (33%) | ||
abca9 | XP_031750505.1 | rim_protein | <170..1595 | CDD:130324 | 416/1612 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |