Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004910916.1 | Gene: | abca1 / 100491942 | XenbaseID: | XB-GENE-1001143 | Length: | 2311 | Species: | Xenopus tropicalis |
Alignment Length: | 1977 | Identity: | 630/1977 - (31%) |
---|---|---|---|
Similarity: | 982/1977 - (49%) | Gaps: | 417/1977 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 ELVLPAIFSLL-----LVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRSSYLGKLIALIAPN 90
Fly 91 RRRKNGGF-----------------SKFEFILCYSPVNPVL--KKLVEEAWQSLGKNKICESENA 136
Fly 137 TQLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTMRLFPTI 201
Fly 202 DLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMKRYPFPAYIFDPLLE 266
Fly 267 GMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAIL 331
Fly 332 IAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYI 396
Fly 397 PYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAV 461
Fly 462 MIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGE--REYTGVEDIPNGHVEQRDP 524
Fly 525 KAFETEPEGKHIGLQMRHLKK--RFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMF 587
Fly 588 PPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKY 652
Fly 653 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVG 717
Fly 718 RTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDD------C---- 772
Fly 773 --------ETNEVTA-------------------------------------------------- 779
Fly 780 -----------------------LLNKYIPGLKPECDIGAELSYQLPDSASAK--FEEMFGQLEE 819
Fly 820 QSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKDQHEIMNG---------------------- 862
Fly 863 -GSGFRGED---DNESVQSD---GIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQN 920
Fly 921 IMPVFFVVVTI---LIIKTQGTFQ--ELKP------ITISLTQYP-------LAVTVLDRSNVQN 967
Fly 968 GT----GYEI-----ANKYEDLARSYGS----------NYGLE---------------------- 991
Fly 992 --------------------LTGTQGFEDYILD-----LGKTIQVRI---------------NSR 1016
Fly 1017 YL-----VAATI------------------------------TESKITAWLNNQALHTAPLTVNM 1046
Fly 1047 VHNAI-ADKL----FGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYI 1106
Fly 1107 LFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRY 1171
Fly 1172 YLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG----MALFIVVVVMSSELFDTKDTA 1232
Fly 1233 DILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGA---LPPILLCELVPQCCNLKPYFAWEEP 1294
Fly 1295 GVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDDDVANERERILQM 1359
Fly 1360 SSNELATKNLVLDRVTKYY--GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISS 1422
Fly 1423 GAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSF 1487
Fly 1488 GFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSI 1552
Fly 1553 VLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYA 1617
Fly 1618 RNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQ 1682
Fly 1683 LNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 66/179 (37%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 70/205 (34%) | ||
CcmA | 538..843 | CDD:224054 | 152/399 (38%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 114/218 (52%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 125/548 (23%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 121/219 (55%) | ||
drrA | 1376..1702 | CDD:130256 | 152/327 (46%) | ||
abca1 | XP_004910916.1 | rim_protein | 1..2272 | CDD:130324 | 625/1969 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 160 | 1.000 | Domainoid score | I3998 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |