Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005165286.1 | Gene: | abca2 / 100006090 | ZFINID: | ZDB-GENE-050517-1 | Length: | 2504 | Species: | Danio rerio |
Alignment Length: | 2046 | Identity: | 607/2046 - (29%) |
---|---|---|---|
Similarity: | 934/2046 - (45%) | Gaps: | 526/2046 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 LGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKICESENATQLELDTV 144
Fly 145 SKNAFAG--VQFDDAWANLT-------ENDPLPNDFHFALRFPAELR------------------ 182
Fly 183 TATIAIANTWLTMRLFPTIDLTG------------------PRNEG------------------- 210
Fly 211 -----DDDGGIPPG---------------------------------YLREGFLPLQHSLSMAYL 237
Fly 238 RQKSGEQDL-PNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKE 301
Fly 302 VMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSS 366
Fly 367 ICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTI----NSYDDLSLSSKLGWSLISNTAMGFG 427
Fly 428 IKLILGFEGTGEGLQWSNF-FTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPR 491
Fly 492 PWNFPFTREFWCG---------------------EREYTGVEDIPNGHVEQRDPKAFETEPEGKH 535
Fly 536 IGLQMRHLKK--RFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIING 598
Fly 599 SDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKAN 663
Fly 664 VASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMD 728
Fly 729 EADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDD------------------CETN 775
Fly 776 EVTALLNKYIPGLKPECDIGAELSYQLPDSASAK--FEEMFGQLEEQSDELHLNGYGVGITSMEE 838
Fly 839 VFMKVGAE-----------KDNTGN-----------------------IKDQHEIMN-------- 861
Fly 862 -------------------GG--SGFRGE-----------------DDNESVQSDGIFSENRRLL 888
Fly 889 QGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQY 953
Fly 954 -----------PLAVTVLDRSNVQ--------------------------------NGTGYEIA- 974
Fly 975 --NKYEDLARSYGSNY-------------------------------------GL---------- 990
Fly 991 ----------------------ELTGTQGFE-----------------DYILDL-GKTI------ 1009
Fly 1010 ---QVRINSRY----------------------LVAATITESKITAWLNNQALHTAPLTVNMVHN 1049
Fly 1050 AI------ADKLFGSSVKIQVTNAPLPYTTSTL-LSQLSTGNNLGTQLASNLCFCMCFVSSIYIL 1107
Fly 1108 FLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYY 1172
Fly 1173 LLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELF----DTKDTAD 1233
Fly 1234 ILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLP 1298
Fly 1299 ETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDDDVANERERILQ-MSSN 1362
Fly 1363 ELATKNLVLDRVTKYY-----GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISS 1422
Fly 1423 GAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGV---QESRIRQLS-EDL 1483
Fly 1484 AKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDS 1548
Fly 1549 GKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLS 1613
Fly 1614 GGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMES 1678
Fly 1679 NRDQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 66/183 (36%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 74/210 (35%) | ||
CcmA | 538..843 | CDD:224054 | 152/326 (47%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 114/218 (52%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 119/577 (21%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 133/226 (59%) | ||
drrA | 1376..1702 | CDD:130256 | 156/334 (47%) | ||
abca2 | XP_005165286.1 | rim_protein | 1..2435 | CDD:130324 | 607/2044 (30%) |
ABC_subfamily_A | 1042..1261 | CDD:213230 | 114/218 (52%) | ||
ABC_subfamily_A | 2118..2341 | CDD:213230 | 133/226 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170582275 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |