DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and ybhF

DIOPT Version :10

Sequence 1:NP_608444.2 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_415315.4 Gene:ybhF / 945413 ECOCYCID:G6411 Length:578 Species:Escherichia coli


Alignment Length:568 Identity:121/568 - (21%)
Similarity:210/568 - (36%) Gaps:135/568 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 LKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHN 605
            :.:..|.|||...|:||:......::...||.|:|.:|.||:||:::||||::|..|:..:...:
E. coli     6 ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFD 70

  Fly   606 IQTERKAASMELGI---AFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQI--- 664
            ......|....||.   .||   |....||::.|.....::    ::..:.:...|..:|:.   
E. coli    71 PIKNDGALHAVLGYMPQKFG---LYEDLTVMENLNLYADLR----SVTGEARKQTFARLLEFTSL 128

  Fly   665 ------------GGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLI 717
                        ||:|.|            :.:.|..||...::|:|:....:|..::..:|.::
E. coli   129 GPFTGRLAGKLSGGMKQK------------LGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMV 181

  Fly   718 NEEKSKRTIILVSNSPA-LAENIADRMAIMSNGELKCTG-TKPFLKNMYGHGYRLTCVKGKNYKR 780
            :|...:..:||.|.|.. .||...| :.:|:.|||...| .|...:.|.|..:.:|.....|.| 
E. coli   182 HELAGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRK- 244

  Fly   781 DELFGMMNS--YMPNMSIERDIGYKVTFVLEN-----------------------KFEDQFPMLI 820
                 ::..  .:|.:|.....|..|..:|:.                       :|||.|..|:
E. coli   245 -----LLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDLL 304

  Fly   821 DDLEENMQQLGVVSFRIRDTSME------EIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAE 879
            .....:...||.:...:..|..|      |:..:||      ..|...|.|..|...|.:..|. 
E. coli   305 GGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFG------DFAATDHVNFAVKRGEIFGLLG- 362

  Fly   880 ANEKGRRTGWKLFF-----LHGRAVIYKRWI-----AAHRHWIVLIFEVLAMALVAVCT------ 928
            .|..|:.|.:|:..     ..|:|::....:     .|.:|   |.:.....:|....|      
E. coli   363 PNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQH---LGYMAQKFSLYGNLTVEQNLR 424

  Fly   929 -FSSIF-IYGKNYELEPLTFNLSQLHTVDAFVELFSEEEDVKDMHAYYT-ELLYWYDAHVATLTK 990
             ||.:: :.|:           :|...:....|.|.    :|.:.::.| ||...:...:|....
E. coli   425 FFSGVYGLRGR-----------AQNEKISRMSEAFG----LKSIASHATDELPLGFKQRLALACS 474

  Fly   991 NRHNAYAL-----------LTQNQFTAHVNSRYIFGATFDQKIVTAWF 1027
            ..|....|           ||:.:|..|:||....|.|.   :||..|
E. coli   475 LMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTV---MVTTHF 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_608444.2 rim_protein <223..1689 CDD:130324 121/568 (21%)
ABC_subfamily_A 541..761 CDD:213230 58/239 (24%)
ybhFNP_415315.4 ABC2_perm_RbbA 5..>565 CDD:468210 121/568 (21%)

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