DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and ABCA10

DIOPT Version :10

Sequence 1:NP_608444.2 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001318860.1 Gene:ABCA10 / 836296 AraportID:AT5G61740 Length:909 Species:Arabidopsis thaliana


Alignment Length:759 Identity:158/759 - (20%)
Similarity:305/759 - (40%) Gaps:127/759 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 CFDG-------SPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYN-DD 203
            |..|       |..|.|::|:.:.   ..|.:.|.|........|.....:|.:..|....| ||
plant   209 CLQGLSLWRNNSVEVNDELFKGNW---KGNPERMTNEIAAAYDLLNTDRNNFDVTIWYNSTNIDD 270

  Fly   204 PNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLV-----LTSHKSLPTIQIRRFPITGREQ 263
            |:...|.|:.:     .:..|...:::..|......|.     :..|::...:.|.         
plant   271 PSRAPLVRVPR-----LLNLVSNAYLKFLKGPGTRILFEFVKEVPKHQTKFNLDIA--------- 321

  Fly   264 DPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMN---IGN--LIHFVSWYLKG 323
             .::|.|.    |..::..|||  :.:..:|.|||.::| .::.|:   ||.  :|.: :::|..
plant   322 -SMLGPLF----FTWVVLLLFP--VILTSLVYEKQERLR-IIMKMHGLGIGPYWMISY-AYFLTL 377

  Fly   324 LIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNA-VR 387
            .::.:||.:|..:.:.:|:.:.:....|..:|.:.:.|      .::||.:.::.|.....| |.
plant   378 SMFYVISLVIFGSAIGLRYFRLNDYSVQFIFYFIFVNL------QISFAFLASSIFSKVKTATVV 436

  Fly   388 VLTILWIMSYVPTFILSNNLEG------NIHALR-YVSYALPNVVATLVIEFLIERESIVHITWE 445
            ..|:::....:..|:....||.      .|.||. |..::|    ...:.||.........:.|:
plant   437 AYTLVFASGLLGMFLFGELLESPTFPEKGILALELYPGFSL----FRGLYEFAQYASRGNGMKWK 497

  Fly   446 D---SGY-RLNYDGGHITVTASSWIFMLNALVYCAIGLYVDMWRGGDRSGKKMKKPNTNASVQED 506
            |   ||. :|.|      :.:..|..:|      .:...:|:.....||.....|   .:|....
plant   498 DLKESGMDKLFY------LMSVEWFVIL------IVAYSIDLLSSSGRSPFVFFK---KSSSLPS 547

  Fly   507 PYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATN------------------ 553
            |..:|.:|   :...|.:..|.:.:.       :.|::||.|...|.                  
plant   548 PSVQRQNS---ENVLIDMEKTDVTQE-------REKVEKLRKEGTTGHAIVCDNLKKVYPGSDGN 602

  Fly   554 -DRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMEL 617
             .:.|:.....:|...|...::|.||.||::.:.::.||::|:.||.::...:|..:.......:
plant   603 PPKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKDMNKVYTSM 667

  Fly   618 GIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNV-LQIGGLKTKRIRTLTDRDLC 681
            |:...||:|....|..::|.|..|:|.:..:..:........:| |..||:..|.....:.....
plant   668 GVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKSVSLFDGGVADKPAGKYSGGMKR 732

  Fly   682 LVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIM 746
            .:|:..:.:||..::.:|:..:.||..::..:|.:|...|....|||.::|...||.:.||:.|.
plant   733 RLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQRAKQNTAIILTTHSMEEAEFLCDRLGIF 797

  Fly   747 SNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVL--E 809
            .:|.|:|.|....||..||..|..|......:: :::..|:....||.        |..:.|  .
plant   798 VDGGLQCVGNPKELKGRYGGSYVFTMTTSVEHE-EKVERMVKHISPNS--------KRVYHLAGT 853

  Fly   810 NKFE--DQFPMLID---DLEENMQQLGVVSFRIRDTSMEEIFLR 848
            .|||  .|..|:.|   .:|:...:..|.::.:.||::|::|.:
plant   854 QKFEIPKQEVMIADVFFMVEKVKSKFTVFAWGLADTTLEDVFFK 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_608444.2 rim_protein <223..1689 CDD:130324 140/675 (21%)
ABC_subfamily_A 541..761 CDD:213230 55/239 (23%)
ABCA10NP_001318860.1 rim_protein <326..>904 CDD:130324 134/624 (21%)
ABC_subfamily_A 591..812 CDD:213230 50/220 (23%)

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