DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and ABCA1

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_850354.2 Gene:ABCA1 / 818768 AraportID:AT2G41700 Length:1882 Species:Arabidopsis thaliana


Alignment Length:2066 Identity:439/2066 - (21%)
Similarity:767/2066 - (37%) Gaps:593/2066 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFLLMNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPI--DLDRSWMQ 70
            |:|..|..||..|:..:|......:|:|   |:|.:|:   |.|..|.||...|.  ::|:..:.
plant     6 RQFKAMLRKNWLLKTRHPFVTSAEILLP---TIVMLLL---IAVRTRVDTTIHPAHSNIDKDTVV 64

  Fly    71 MVEKLEKARQVADTYNVKGN-PFTPHLV---------IGWAPK-------------RYGIFQAMM 112
            .|.              ||| |..|.::         :.:||.             ::...:.:.
plant    65 EVG--------------KGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVT 115

  Fly   113 RRVQKQIE---PMTSVGFEDCEEMRESVIENGLFAGLCFDGSPFVEDQ-VFEEDTLESYSNIQPM 173
            :..:..||   .:||..:..|.|:|.           |  .:|.::.. ||.|..       ..:
plant   116 KIFKDDIELETYITSAHYGVCSEVRN-----------C--SNPKIKGAVVFHEQG-------PHL 160

  Fly   174 LNYTILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPY----EGGF-----VGYVREGFI 229
            .:|:|.|              |....:...||...:...|.||    |.|.     :.|...||:
plant   161 FDYSIRL--------------NHTWAFAGFPNVKSIMDTNGPYINDLEMGINTIPTMQYSFSGFL 211

  Fly   230 RLQKSVSESFLVLT---------SHKSL--------------PTIQIRRFPITGRE--QDPLMGN 269
            .||: |.:||::..         ||.:|              |:: ||..|...||  .|.....
plant   212 TLQQ-VVDSFIIFASQQNNDLPLSHSNLSSALRFELPWTLFSPSV-IRMVPFPTREYTDDEFQSI 274

  Fly   270 LNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVSWYLK-GLIYEMISSLI 333
            :...|..:.::|||||....:...|.||:.::|:.|..|.:.:.|..:||::. .|.:.:.|.:|
plant   275 VKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCSGII 339

  Fly   334 IAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYV 398
            .|..:...:......|..|       ..|.:..:|:..:.|::.||..|..||.|.|:.::.::.
plant   340 TACTMGSLFKYSDKTLVFT-------YFFLFGLSAIMLSFMISTFFTRAKTAVAVGTLTFLGAFF 397

  Fly   399 PTFILSNNLEGNIHALRYVSYAL-PNVVATLVIEFLIERESIVHITWED-----SGYRLNYDGGH 457
            |.:.:  |.|.....|:.|:..| |...|...|.|.....:.|.:.|.:     ||         
plant   398 PYYTV--NDESVSMVLKVVASLLSPTAFALGSINFADYERAHVGLRWSNIWRASSG--------- 451

  Fly   458 ITVTASSWIFMLNALVYCAIGLYVDM-----------WR-------GGDRSGKKMKKPNTNASV- 503
            ::......:.:|::::|||:|||:|.           |.       |..::..:.:.|.....: 
plant   452 VSFFVCLLMMLLDSILYCALGLYLDKVLPRENGVRYPWNFIFSKYFGRKKNNLQNRIPGFETDMF 516

  Fly   504 QEDPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFAT--NDRPALNLFSWNVY 566
            ..|....:|:.|....::|   |.::.:.|...|  .::::.|.|.:|:  .:..|:|.....:|
plant   517 PADIEVNQGEPFDPVFESI---SLEMRQQELDGR--CIQVRNLHKVYASRRGNCCAVNSLQLTLY 576

  Fly   567 ENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFT 631
            ||::..|:||||.||||.:.:|.||:.|:.|..:|..::|.|.......|||:...||:|....|
plant   577 ENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITNMDEIRKELGVCPQHDILFPELT 641

  Fly   632 VIDYLRFICRVKGLH------------NNIEIDGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVS 684
            |.::|.....:||:.            ..:.:..:.|..:..|. ||:|.|            :|
plant   642 VREHLEMFAVLKGVEEGSLKSTVVDMAEEVGLSDKINTLVRALS-GGMKRK------------LS 693

  Fly   685 ICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNG 749
            :..|.:|||.:|::|:..|.:|..:..|.|.||.:.|..|.|:|.::|...||.:.||:.||:||
plant   694 LGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIGIMANG 758

  Fly   750 ELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVL------ 808
            .|||.|:..|||:.||.||.||.|| .:........:::.::|:.:...::|.:::|.|      
plant   759 SLKCCGSSIFLKHHYGVGYTLTLVK-TSPTVSVAAHIVHRHIPSATCVSEVGNEISFKLPLASLP 822

  Fly   809 --ENKFEDQFPMLIDDLE-------ENMQQLGVVSFRIRDTSMEEIFLRF-GC--------ED-- 853
              ||.|.:....:.:.::       |:....|:.|:.|..|::||:|||. ||        ||  
plant   823 CFENMFREIESCMKNSVDRSKISEIEDSDYPGIQSYGISVTTLEEVFLRVAGCNLDIEDKQEDIF 887

  Fly   854 -------------NDQSGAFQ------SHENAQVLLEEYYSTLAEANEKGRRTGWKL-------- 891
                         ::|..:.|      .::.|.|::    :::|:|........|.|        
plant   888 VSPDTKSSLVCIGSNQKSSMQPKLLASCNDGAGVII----TSVAKAFRLIVAAVWTLIGFISIQC 948

  Fly   892 ----------FFLHGRAVIYKRWIAAHRHWIVLIFEVLAMALVAVCTFSSIFIYGKNYELEPLTF 946
                      |:.|.:|:..||..:|.|....:.|:.:..|:..:  |..:|:     :|:|   
plant   949 CGCSIISRSMFWRHCKALFIKRARSACRDRKTVAFQFIIPAVFLL--FGLLFL-----QLKP--- 1003

  Fly   947 NLSQLHTVDAFVELFSEEEDVKDMHAYYTELLYW--------YDAHVATLTKN------------ 991
                          ..:::.:....||:..||..        :|..| .:.|.            
plant  1004 --------------HPDQKSITLTTAYFNPLLSGKGGGGPIPFDLSV-PIAKEVAQYIEGGWIQP 1053

  Fly   992 -RHNAY----------------------ALLTQNQFTAHVNSRYIFGATFDQKI----------- 1022
             |:.:|                      .||:.::|..         ::|||..           
plant  1054 LRNTSYKFPNPKEALADAIDAAGPTLGPTLLSMSEFLM---------SSFDQSYQSRYGSILMDG 1109

  Fly  1023 --------VTAWFNNIPLHSAPYALNVVHNAVAR-HLFDEEATIDVTLAPLPFRTAINTFPPSSH 1078
                    .|...|....|:.|..:||:|.|:.| ...::..||.....|||.............
plant  1110 QHPDGSLGYTVLHNGTCQHAGPIYINVMHAAILRLATGNKNMTIQTRNHPLPPTKTQRIQRHDLD 1174

  Fly  1079 TFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCAC 1143
            .|...:...|.|  :||..:||:.::.||....|.||.::||.|.|||..|.::|.:..|.....
plant  1175 AFSAAIIVNIAF--SFIPASFAVPIVKEREVKAKHQQLISGVSVLSYWLSTYVWDFISFLFPSTF 1237

  Fly  1144 VVVMVALYENPNHDVMLYGY-ISVTLMLGGFW---VILLAYLMASLCRNPCYGFLWLCGINSIGL 1204
            .:            ::.|.: :...:.:|.|.   ::||.|.:|......|..|           
plant  1238 AI------------ILFYAFGLEQFIGIGRFLPTVLMLLEYGLAIASSTYCLTF----------- 1279

  Fly  1205 VCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYEF--KLICMDPVVNFTSVEVFKCNSIPN 1267
                 |:..|  ||......|..:....::    |:..|  .||......|......|:.:  |.
plant  1280 -----FFTEH--SMAQNVILMVHFFSGLIL----MVISFVMGLIPATASANSYLKNFFRLS--PG 1331

  Fly  1268 CCI----------------KSNYGTF-------------TAGIYHDLVI--LTLLDIILLACLFV 1301
            .|.                ||::|.|             ...|::.||.  |.|:.:..:....:
plant  1332 FCFSDGLASLALLRQGMKDKSSHGVFEWNVTGASICYLGLESIFYFLVTLGLELMPVQKVMSFSI 1396

  Fly  1302 SEYHSILGFADCRLDTRTNESPDSNQESRAF-PGILSNDTAALVDKEHTSRLN---------EEE 1356
            .|:.                     |..:|| .|..|:.|..|: |:.|..::         :||
plant  1397 GEWW---------------------QNLKAFKQGAGSSSTEPLL-KDSTGAISTDMEDDIDVQEE 1439

  Fly  1357 RSKYAAVGIGIVSKYRRNRVL---------------------RDLDFTLAKSECLSITGANNSGK 1400
            |.:       ::|....|.:|                     :.|.|::...||....|.|.:||
plant  1440 RDR-------VISGLSDNTMLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGK 1497

  Fly  1401 TTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG-H 1464
            ||.|.::..|....:|..:|....:........:.:|||||.|:|....|.:|.|.::|.::| .
plant  1498 TTTLSMLSGEETPTSGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVV 1562

  Fly  1465 RHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKR 1529
            .|||...::|.|:....|......|..: :.|..|:|..|.|::|.|.::.:|....|:||..||
plant  1563 DHRIDNVVTEKLVEFDLLKHSHKPSFTL-SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKR 1626

  Fly  1530 IILMMTSTMQAMG--SSFLYTMLTGLDAERLSLRTPLLLEGQLWMI-RPMDTETENYKSGYQLEV 1591
            .:..:.|.:....  ::.:.|..:..:|:.|..|..:::.|:|..| .|...:| .|.:..:|||
plant  1627 FMWDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKT-RYGNHLELEV 1690

  Fly  1592 R--------------------FKRKVNP-------------------------NVSMSRATWNLI 1611
            :                    |.....|                         .:|:|......|
plant  1691 KPNEVSNVELENFCQIIQQWLFNVPTQPRSLLGDLEVCIGVSDSITPDTASASEISLSPEMVQRI 1755

  Fly  1612 NHF-----------PMSP-------------------------------NKKFSA---FMEIKFP 1631
            ..|           |..|                               .:||||   |::..||
plant  1756 AKFLGNEQRVSTLVPPLPEEDVRFDDQLSEQLFRDGGIPLPIFAEWWLTKEKFSALDSFIQSSFP 1820

  Fly  1632 DAVLTIERDDSMVFVLPLGT--TTFSEIFLTLRKDAFEMNIEDYFITRNML 1680
            .|........|:.:.||.|.  .:.::.|..|.::...:.|.:|.|:::.|
plant  1821 GATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSISQSTL 1871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 51/223 (23%)
CcmA 541..848 CDD:224054 98/335 (29%)
ABC_subfamily_A 541..761 CDD:213230 73/233 (31%)
ABC2_membrane_3 911..>1189 CDD:289468 63/344 (18%)
ABC2_membrane <1080..>1188 CDD:304374 28/111 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 57/231 (25%)
PRK14255 1371..1586 CDD:172743 59/239 (25%)
ABCA1NP_850354.2 ABC2_membrane_3 <290..474 CDD:289468 45/201 (22%)
ABC_subfamily_A 549..770 CDD:213230 73/233 (31%)
drrA 556..874 CDD:130256 99/331 (30%)
ABC2_membrane_3 <1118..1381 CDD:289468 64/300 (21%)
Zinc_peptidase_like <1215..1382 CDD:301362 36/202 (18%)
EcfA2 1450..1676 CDD:224047 56/226 (25%)
ABC_subfamily_A 1453..1679 CDD:213230 56/226 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.