Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233707.2 | Gene: | Abca2 / 79248 | RGDID: | 620238 | Length: | 2435 | Species: | Rattus norvegicus |
Alignment Length: | 1964 | Identity: | 404/1964 - (20%) |
---|---|---|---|
Similarity: | 719/1964 - (36%) | Gaps: | 562/1964 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 126 GFEDCEEMRESVIENGL----------FAGLCF----DGSPFVEDQVFEEDTLESYSNIQPMLNY 176
Fly 177 TILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFL- 240
Fly 241 VLTSHKSL-PTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQF 304
Fly 305 LINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHG-VLTQTPWYILILVLFCYNCAA 368
Fly 369 VAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSY----ALPNVVATLV 429
Fly 430 IEFLIERESIVHITWEDSGYRLNY--------DGGHITVTASSWIFMLNALVYCAIGLYVD---- 482
Fly 483 ----------------MWRGGDRSGKKMKKPNTNASVQEDPY-HERGDSFTHQGQAIGVNS---- 526
Fly 527 -TKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAG 590
Fly 591 LVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQS 655
Fly 656 NYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEE 720
Fly 721 KSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVK----------- 774
Fly 775 -------GK----NYKRDELFGMMNSYMPNMSIERDIGYKVTFVLENKF--EDQFPMLIDDLEEN 826
Fly 827 MQQLGVVSFRIRDTSMEEIFLRFGCED----NDQSGAFQSHENA--------------------- 866
Fly 867 --------------------------------------------QVLLEE-YYSTLAEANEKGRR 886
Fly 887 -TGW--KLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMAL---VAVCTFSSIFIYGKNYELEPLT 945
Fly 946 FNLSQLHTVDA----FVELFSEEE---------DVKDMHAYYT---------------------- 975
Fly 976 ------------------------------------------------------ELLYWYDA--- 983
Fly 984 ---------------------------------------------HVAT------LTKNRHNAYA 997
Fly 998 LLTQNQFTAHVNSRYIFGA-TFD-----------------------QKIVTAWFNNIPLHSAPYA 1038
Fly 1039 LNVVHNAVARHLFDEEA------TIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTFIWP 1097
Fly 1098 AFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNHD----- 1157
Fly 1158 ------VMLYGYISVTLML--GGFWVILLAYLMASLCRNPCYGFLWLCGIN-SIGLVCFSQFYRT 1213
Fly 1214 HPESMLLEPTFMAMYTVATVICKLFMIYEFKLICMDPVVNFTSVEVFKCNSIPNCCIKSNYGTF- 1277
Fly 1278 TAGIYHDLVILTLLDIILLACLFVSEYHSILGFAD------------------------------ 1312
Fly 1313 -C---------RLDTRTNESPD----SNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAV 1363
Fly 1364 GIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTH 1428
Fly 1429 RVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMC 1493
Fly 1494 TTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERL 1558
Fly 1559 SLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFS 1623
Fly 1624 AFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITR----NMLVGF- 1683
Fly 1684 --QIFTYDQHQDNP 1695 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 47/229 (21%) |
CcmA | 541..848 | CDD:224054 | 101/330 (31%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 74/219 (34%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 73/466 (16%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 23/120 (19%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 52/206 (25%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 52/214 (24%) | ||
Abca2 | XP_006233707.2 | rim_protein | 1..2369 | CDD:130324 | 402/1954 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342289 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |