DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca12

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_780419.2 Gene:Abca12 / 74591 MGIID:2676312 Length:2595 Species:Mus musculus


Alignment Length:1919 Identity:398/1919 - (20%)
Similarity:763/1919 - (39%) Gaps:433/1919 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FIPVNHRSDTVYDPIDLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMM 112
            :.|.|..:..:.:..::  :..|:.|..||:::..|...:..|.|  ||:....|    :.|..:
Mouse   808 YSPYNPTTKAIMEKSNV--TLRQLAELREKSQEWMDKSPIFMNSF--HLLNQTIP----MLQNTL 864

  Fly   113 RRVQKQIEPMTSVG---------FEDCEEMRESVIEN-------GLFAGLCFD-GSPFVEDQVFE 160
            |....|:....|||         .:|.:.:|..::.|       ...:.|..: .|..:.|::..
Mouse   865 RNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLVNNIDIIDQLNTLSSLTVNISSCVLYDRIQA 929

  Fly   161 EDTLESYS-----------------------------------NIQPMLNYTILLPSELRMLDGD 190
            .||:|...                                   ::.|::.|||.:..:.......
Mouse   930 SDTVEEMETVAEQLYKSNELFGSVIFKLPSNGSLHRGFDPEKVSLPPIVRYTIRMSLKTAQTTRS 994

  Fly   191 FRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLP--TIQI 253
            .|...|....::.|:.      ||.|        ...||.||.|:..:.:.|.:.::..  .:|:
Mouse   995 IRTKIWAPGPHNSPSH------NQIY--------GRAFIYLQDSIERAIIELQTGRNSQEVAVQV 1045

  Fly   254 RRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVS 318
            :..|.....:|..:.:::|.:|.::::.::.....||.::|.||..::.:::..|.:.:..||.:
Mouse  1046 QAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFA 1110

  Fly   319 WYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNAL 383
            |.::.:.:.:::..|:..:||.     ..:|.:|..:||.|....|:.:.:|.:.:::.||.|..
Mouse  1111 WLIESIGFLLVTIAILIVILKF-----GNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTN 1170

  Fly   384 NAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIERESIVHITWEDSG 448
            .|..:.::::::::.| ||:...:|..:      ||.: .|..:|:........|.....:|:.|
Mouse  1171 IAALIGSLIYVIAFFP-FIVLVTVEDEL------SYVI-KVFMSLLSPTAFSYASQYIARYEEQG 1227

  Fly   449 YRLNYDGGHIT-----VTASSW---IFMLNALVYCAIGLYV--------------------DMWR 485
            ..|.::..:.:     .|:..|   :.:.::.:|..|..||                    ..|:
Mouse  1228 VGLQWENMYKSPVQDDTTSFGWLCCLILADSFIYFFIAWYVRNVFPGTYGMAAPWYFPILPSYWK 1292

  Fly   486 GGDRSG---KKMKKPN----TNASVQE-DPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLK 542
              :|.|   .|.:|.|    ||..:|. :|    ..|.|....|...|    .|.||...:..:.
Mouse  1293 --ERFGCAEVKHEKSNGLMFTNIMMQNTNP----SASKTSPDCAFPSN----IEPEPKDLQVGVA 1347

  Fly   543 IKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQ 607
            :..:.|.:.:  :.|:...:.|.||..:|.|:|.||.||:|.:.:|.||...:.||:.:...:|:
Mouse  1348 LHGVTKIYGS--KTAVENLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGATAGTIFVYGKDIK 1410

  Fly   608 TERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVK-------GLHNNIEIDGQSNYFLNVLQIG 665
            |:.......:|:...||:|.:..|..::|.....:|       .||..::         ..|:..
Mouse  1411 TDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKTQLHEEVK---------RTLKDT 1466

  Fly   666 GL---KTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTII 727
            ||   :.||:.||:......:||..|.:|.|.::::|:..:.:|..::..:|::|::.|:.||||
Mouse  1467 GLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTARTII 1531

  Fly   728 LVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRD--------ELF 784
            |.::....||.::||:|.:..|.|:|.|:..:||..:|.||.||..|.|:...|        .:.
Mouse  1532 LSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLDTNAICDTVAVT 1596

  Fly   785 GMMNSYMPNMSIERDIGYKVTFVL---ENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIF 846
            .|:.|::|...::.|||.::.:||   ..|....:..|:..|::.|.:|.:..:.|.||::||:|
Mouse  1597 AMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVF 1661

  Fly   847 LRFGCEDNDQSGAFQSHENAQVL-------------LEEYYSTLAEANEK-----GRRTGWKLFF 893
            |....:....|.....|...:.:             |....|...:.::|     .:..|:.|..
Mouse  1662 LNLTKDSQKSSNMSLEHLTQRKVGNPSANGTSTPDDLSVSSSNFTDRDDKVLTRSEKLEGFGLLL 1726

  Fly   894 LHGRAVIYKRWIAAHRHW--------IVLIFEVLAMALVAVCTFSSIF--------IYG------ 936
            ....|::.||:....|:|        :.::|...||.|..:...|:.:        |||      
Mouse  1727 KKIMAILIKRFHHTRRNWKGLIAQVILPIVFVATAMGLGTLRDSSNSYPEIMISPSIYGTSEQTA 1791

  Fly   937 --KNYE---------------LEPLTFNLSQL---------------HTVDAFVELFSEEEDVKD 969
              .|::               ::.:..|.|.|               ..:|.| .:.|..::|::
Mouse  1792 FYANFDPSTSGLVSALWNFPGIDNVCLNTSDLQCLKKDDLGKWNTSGEAIDNF-GVCSCSDNVQE 1855

  Fly   970 ----------MHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKI-- 1022
                      ...|.::::|       .||......|.:.|.|.|   |..|| .|.:|..|:  
Mouse  1856 CPKFNYHPPHRRTYSSQVIY-------NLTGKHMENYLITTANHF---VQKRY-GGWSFGMKLTN 1909

  Fly  1023 -----VTA----------WFNNIPLHSAPYALNVVHNAV----------ARHLF----------- 1051
                 |||          |::....||.|..||.::|.:          |||..           
Mouse  1910 DLRFDVTAVPDNRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEYDAARHGIIMYSHPYPGVQ 1974

  Fly  1052 -DEEATIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQ 1115
             .|:|||...:..|                   :|..|....:....:|..|::.|..:..|:.|
Mouse  1975 DQEQATISSLIDIL-------------------VALSILMGYSVTTASFVTYIVREHQTKAKQLQ 2020

  Fly  1116 FLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENP-----NHDVMLYGYISVTLMLGGFWV 1175
            .::|:.|..||....:||::|.|:..|..:.::|:::.|     |:    .|.:|:.|:|.|:..
Mouse  2021 HISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSGNN----LGAVSLLLLLFGYAT 2081

  Fly  1176 ILLAYLMASLCRNPCYGFL-WLC-----GINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVI 1234
            ....||:|.|.......|: ::|     |||||  |..|..|....|    :|....:..::..:
Mouse  2082 FSWMYLLAGLFHETGMAFITYVCVNLFFGINSI--VSLSVVYFLSKE----KPNDPTLELISETL 2140

  Fly  1235 CKLFMIYE--------FKLICMDPVVNFTSV-------EVFKCNSIPNCCIKSNYGTFTAGIYHD 1284
            .::|:|:.        .:|.....|::|...       |.|:.:.:         |.....:...
Mouse  2141 KRIFLIFPQFCFGYGLIELSQQQAVLDFLKAYGVEYPSETFEMDKL---------GAMFVALVSQ 2196

  Fly  1285 LVILTLLDIIL------LACLFVSEYHSILGFADCRLDTRTNESPDSNQESRAFPGILSNDTAAL 1343
            ..:..||.:::      ...||..::.|          :...|:.|.:::.||            
Mouse  2197 GTMFFLLRLLINEWLIKKLRLFFRKFTS----------SPIMETVDEDEDVRA------------ 2239

  Fly  1344 VDKEHTSRLNEEERSKYAAVGIGIVSKYRRNR----------VLRDLDFTLAKSECLSITGANNS 1398
                      |..|.:..|....:|..:|..:          .:.::...:...||..:.|.|.:
Mouse  2240 ----------ERFRVESGAAEFDLVQLHRLTKTYQLIHKKIIAVNNISLGIPAGECFGLLGVNGA 2294

  Fly  1399 GKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCY-RMVGYCPQKDSLPSEFTPRELLYIHAMLQ 1462
            ||||:.|::..:...::|.:.|.:.|.:...|..: .:||||||:|:|....|..|.||.:|.:.
Mouse  2295 GKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVH 2359

  Fly  1463 GHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTG 1527
            |...:..::....|||.:.|....:||..||:.|..|:|..|.|::|.|.::.:|...:|:||..
Mouse  2360 GIPEKDIKDTVHKLLRRLHLMAYKDRSTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKS 2424

  Fly  1528 KRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVR 1592
            ||.:..:.|.......|.:.|..:..:.|.|..|..:::.|:...|..:......:..|:.::|.
Mouse  2425 KRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVH 2489

  Fly  1593 FKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEI 1657
            .|   |..|||...|                .||::.||...|..:....:.:.:|:.....:.|
Mouse  2490 LK---NNKVSMETLT----------------KFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANI 2535

  Fly  1658 FLTLRKDAFEMNIEDYFITRNMLVG-FQIFTYDQ 1690
            |..|..:...:||.::.:::..|.. |..|..||
Mouse  2536 FDLLETNKTALNITNFLVSQTTLEEVFINFAKDQ 2569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 42/224 (19%)
CcmA 541..848 CDD:224054 89/327 (27%)
ABC_subfamily_A 541..761 CDD:213230 60/229 (26%)
ABC2_membrane_3 911..>1189 CDD:289468 77/385 (20%)
ABC2_membrane <1080..>1188 CDD:304374 28/112 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 57/217 (26%)
PRK14255 1371..1586 CDD:172743 57/225 (25%)
Abca12NP_780419.2 ABC2_membrane_3 <1006..1267 CDD:289468 54/287 (19%)
NosY <1108..1269 CDD:224196 33/173 (19%)
ZnuC 1346..1570 CDD:224046 62/234 (26%)
ABC_subfamily_A 1350..1565 CDD:213230 60/225 (27%)
ABC2_membrane_3 <1913..2174 CDD:289468 63/289 (22%)
CcmA 2253..2567 CDD:224054 80/332 (24%)
ABC_subfamily_A 2254..2477 CDD:213230 58/222 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838437
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.