DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca14

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_017167760.1 Gene:Abca14 / 67928 MGIID:2388708 Length:1719 Species:Mus musculus


Alignment Length:1882 Identity:431/1882 - (22%)
Similarity:776/1882 - (41%) Gaps:370/1882 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IRKFLLMNWKNHKLQLANPLELLV-ILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDRSWMQ 70
            :::|.::.|||..|:..|.:.|:| |:|:..||.                            |..
Mouse     6 MKQFSVLLWKNFLLKSRNVVGLVVEIILIFLLFV----------------------------WTL 42

  Fly    71 MVEKLEKARQVADTYNVKGNPFTPHLV-------------IGWAPKRYGIFQAMMRRVQKQIEPM 122
            .|.::.|...::|..      |.|.|:             :.:.|......:.:...|:|.:...
Mouse    43 TVRRISKKTSISDVI------FNPILLTLPKFLNENFDYELAYVPSESNAARNITEMVKKDLNFN 101

  Fly   123 TSV-GFEDCEEMRESVI--EN---GLFAGLCFDGSPFVEDQ--------------VFEEDTLESY 167
            ..| ||.. ||..|..|  ||   .:.|.:.||......::              :::.:.|...
Mouse   102 FKVQGFPS-EESFERYIKYENKDAHVLAAIVFDHKFKTSNERLPLQVKYSLRFGRIYDPENLFQP 165

  Fly   168 SNIQPML--NYTILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIR 230
            |..|..:  |.:.|.||...:...:|       |.||               ||..||:||||:.
Mouse   166 SKYQKEIEWNTSTLFPSVPSLGPRNF-------LEND---------------GGNPGYIREGFLI 208

  Fly   231 LQKSVSESFLVLTSHKSL------PTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLF 289
            :|.||.::.::..|.::.      .||...|||......|..:.......|:.|:..|...|.:.
Mouse   209 VQHSVDKAIMMYHSGRAAEDIFANTTIYAERFPHPAFIHDSFLWTFIAMFPWTILFTFTQMALVI 273

  Fly   290 VWQVVSEKQSQVR------------------------------------QFLINMNIGNLIHFVS 318
            |..::.||:.:::                                    ::.:.:.:.|.:.:||
Mouse   274 VGTIMLEKEKRLKLTYMYAYVPRVCLFPAKNRRGCWIPGMEVTDGCEHPEYQLMVGLSNAMLWVS 338

  Fly   319 WYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNAL 383
            :::..|:...|...::..:|.::...:.......|.:|....: |:..::|....:::..|..|.
Mouse   339 YFITFLLMYFIIICLLCGILFLKITHERVFQHSDPLFIAFYFM-CFAVSSVLLGFLISTLFNKAS 402

  Fly   384 NAVRVLTILWIMSYVPTFILSN-----NLEGNIHALRYVSYALPNVVATLVIEFLIERESIVH-I 442
            .|..:...|..:::.|..||.:     :|.|.: ||..::    |.......:.:.:.|...| .
Mouse   403 LATSIAGFLHFLTFFPYLILYHKYDQISLSGKL-ALCLIT----NTALAFGTDLICKLEMKGHGA 462

  Fly   443 TWEDSGYRLNYDGGHITVTASSWIFMLNALVYCAIGLYVDMWRGGDRSGKKMKKPNTNASVQE-- 505
            .|.:...::|.| ..:|:.....:|:.:|.:|..:..|:|....|...   :.|| .|..:|:  
Mouse   463 QWNNFATKVNAD-DDLTLAHIIGMFLFSAFLYGLVAWYLDAVFPGTYG---VPKP-WNFFLQKAY 522

  Fly   506 ---DPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRP--ALNLFSWNV 565
               :|...|.:|     |...:.|:...|.||......::|:.|.|.|...:..  |:|..|.|:
Mouse   523 WFGEPALSREES-----QVSDLLSSDFMEPEPVGLVAGIRIQHLYKEFILKNSTLMAVNDLSLNL 582

  Fly   566 YENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGF 630
            ||.::|||:||||.||:|.|.||.||..|:||.|.||.::|.::.......||:....|:|....
Mouse   583 YEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVYISGYDISSDMVQIRKSLGLCPQDDLLFPML 647

  Fly   631 TVIDYLRFICRVKGLHNNIEIDGQS---NYFL---NVLQ---------IGGLKTKRIRTLTDRDL 680
            ||.::|.|.|.:||    |.:..||   |..|   .:||         .||:|.|          
Mouse   648 TVSEHLHFYCVIKG----IPLQNQSRETNRMLTSFGLLQQSNTMSKDLSGGMKRK---------- 698

  Fly   681 CLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAI 745
              :||..|.:|::.::::|:..|.:|..::...|:|:...|..|||:|.::....|:.:.||:||
Mouse   699 --LSIIIALIGDTKVVILDEPTSGMDPVSRRATWDLLQHYKKDRTILLTTHHMDEADVLGDRIAI 761

  Fly   746 MSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLEN 810
            :..|.|||.|:..|||.:||.||.|..||..:...:::|.::.:|:|...:|.::..:::|:|..
Mouse   762 LVMGILKCCGSSLFLKKLYGVGYHLVIVKTPDSNDEKIFQLIKNYIPTAKMETNVAAELSFILPK 826

  Fly   811 KFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRF----------------------GCED 853
            :...:|..|..||||..::||:..|.:..|:|:|:|.:.                      ..||
Mouse   827 EHTHRFAELFTDLEEKQEELGISGFGVSMTTMDEVFFKVSNLEDLKLNTEIAPSASIVSQSSNED 891

  Fly   854 NDQSGAFQSHENAQVLLEEYYSTLAEANEKGRRTGWKLFFLHGRAVIYKRWIAAHRHWIVLIFEV 918
            |......::.|..........|:.        ..||.|:....||:..||.:.:.|:|.:|:.::
Mouse   892 NQNMNVPRNFERPGYSRRHLDSSF--------NAGWSLYIQQFRAMFIKRVMFSWRYWKLLLLQL 948

  Fly   919 LAM-----ALVAVCTFS---------SIFIYGKNYELEPLTF----NLSQLHTVDAFVELFSEEE 965
            ||:     .|:...:||         .:..||:.  :.|.:.    ||:|:.|.:....|.::::
Mouse   949 LALLGLMYLLIKGISFSVPKEPARVMDLEQYGET--IVPFSVSGDPNLTQILTKNLETMLKAKKQ 1011

  Fly   966 DVK----DMHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKIVTAW 1026
            .:.    ||..|                        |||...........:....|.::|....|
Mouse  1012 KIHEVQGDMKNY------------------------LLTSKDCIYSCIVAFSLDVTTEEKTFIFW 1052

  Fly  1027 FNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLPFRTAINTFPPSSHTFGGC-LAFGICF 1090
            |||...|:||.:|:::.|.:.::|...:|||.|:..|.|.|  :.....:..:..|. :.|.:.|
Mouse  1053 FNNEAYHAAPLSLSILDNIIYKYLSGPDATITVSNNPQPQR--VTKDKSNERSISGIQIVFNLLF 1115

  Fly  1091 VLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVA-LYENP 1154
            .::.....|.:..:|||.|..|..||::||...::|...:|:||  ::.|.|||:::|. ||.:.
Mouse  1116 GMSIFTSGFCLMTVTERVSKAKHIQFVSGVYTLNFWLSALLWDL--IIHFVACVLLLVVFLYTDV 1178

  Fly  1155 NHDVML--YGYISV--TLMLGGFWVILLAYLMASLCRNP------------CYGFLWLCGINSIG 1203
              |::|  |.::..  .|||.|:.:|...||::....|.            |.||:   .|....
Mouse  1179 --DILLEKYHFLDTMFILMLFGWSIIPFIYLLSFWYNNSTNAYIKIFVFNHCLGFI---SIIVDA 1238

  Fly  1204 LVCFSQFYRTHPESMLLEP-TFMAMYTVATVICKLFMIYEFKLICMDPVVNFTSVEVFKCNSIPN 1267
            :|......:|..::::|.. ..:.:|.....|.|.:.|:|.:.:|.         .:...|:||:
Mouse  1239 VVQIIPDIKTSTKNLILNSMLLLPIYNFGMSIYKYYNIHEIRKLCS---------SLGYINTIPS 1294

  Fly  1268 CCIKSN------YGTFTAGIYHDLVILTLLDIILLACLFVSE----------YHSILGFADCRLD 1316
            |  ||.      |......|...:..:....:|....:.:.|          |..:| |...|:.
Mouse  1295 C--KSQIIDIPIYSMNQKAIGRHVTAMAATGLIYFILIILLETTSWNLKIFIYRYVL-FGIYRIF 1356

  Fly  1317 TRTNESPD----SNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAV----GIGIVSKYRR 1373
            .:...|.:    |.:|.              |..|..:.||...||..:.|    .|.|..|...
Mouse  1357 YKARMSEELSGYSEEED--------------VQNERETILNHPWRSLNSTVLIKELIKIYFKIPP 1407

  Fly  1374 NRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGY 1438
            ...:|::...:.|.||..:.|.|.:||||..|::..|....:|.::|..||:..:.::....|||
Mouse  1408 TLAVRNISVAIQKEECFGLLGLNGAGKTTTFKILTGEEIATSGDVFIEGYSITRNILKVRSKVGY 1472

  Fly  1439 CPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYF 1503
            |||.|:|....|.||:|.::|.:.|......|...:.||:::.|.|..::.:...:.|..|||..
Mouse  1473 CPQFDALLDYMTSREILTMYARVWGIPENSIRAYVDNLLKMLYLKPQADKFIYTLSGGNKRRLST 1537

  Fly  1504 AYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEG 1568
            |.|::|:..::.:|....|:||..:|::.......:..|...:.|..:..:.|.|..|..::::|
Mouse  1538 AIAIMGNSTVVFLDEPSTGMDPLARRMLWNAVIKTRESGKVIIITSHSMEECEALCTRLAIMVQG 1602

  Fly  1569 QLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDA 1633
            :...:.........:.:.|.:.::||...:.|.              :...|.|.|  |: ||.:
Mouse  1603 KFVCLGSPQHLKNKFGNIYTMTIKFKTDTDDNT--------------VQDLKDFIA--EV-FPGS 1650

  Fly  1634 VLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIFTYDQHQDNP 1695
            .|..|....:.:.:|....::.::|..|.|...:.|:|||.|::..|.  |:|....:.|||
Mouse  1651 DLKQENQGILNYYIPSKNNSWGKVFGILEKAKEDYNLEDYSISQITLE--QVFLTFANPDNP 1710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 39/258 (15%)
CcmA 541..848 CDD:224054 107/323 (33%)
ABC_subfamily_A 541..761 CDD:213230 79/236 (33%)
ABC2_membrane_3 911..>1189 CDD:289468 74/305 (24%)
ABC2_membrane <1080..>1188 CDD:304374 34/113 (30%)
ABC_subfamily_A 1370..1577 CDD:213230 54/206 (26%)
PRK14255 1371..1586 CDD:172743 53/214 (25%)
Abca14XP_017167760.1 rim_protein <128..1709 CDD:130324 397/1722 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838508
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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