DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abca3b

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_009297489.1 Gene:abca3b / 564344 ZFINID:ZDB-GENE-050517-2 Length:1703 Species:Danio rerio


Alignment Length:1825 Identity:437/1825 - (23%)
Similarity:783/1825 - (42%) Gaps:274/1825 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFLLMNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIP-VNHRSDTVYDPIDLDRSWMQM 71
            ::|.|:.|||:..|....|..||.:.:|.||:.:.:::|..:. .|:.:.|.|....|       
Zfish     5 QQFGLLLWKNYIQQKRQILVTLVEIALPLLFSAILIVLRQKVSFTNYPNATHYQSFPL------- 62

  Fly    72 VEKLEKARQVADTYNVKGNPFTP-----HLVIGWAPKRYGIFQAMMRRVQKQIEP-MTSV-GFED 129
                              |...|     .|.:.:.|....:.|.:.:.||:.::. :.:| |||.
Zfish    63 ------------------NGLPPLLCYQQLQLAYVPANASVVQQIAQDVQQNLQSCIKNVRGFET 109

  Fly   130 CEEMRESV---IENG-LFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLP--------S 182
            .|:..|.|   .|:| :.|.:.|: .||..|    ::.|....:......|:   |        |
Zfish   110 EEQFEEFVKTDPESGKILAAIVFE-HPFSHD----DEPLPLQVSYHLRFTYS---PRNAPAREKS 166

  Fly   183 ELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYE-----GGFVGYVREGFIRLQKSVSESFLVL 242
            ||.. :.|.   :|.||     :.|.|.::..|.|     ||..||.||||:::|.:|..:.::.
Zfish   167 ELNP-NNDM---DWHTL-----SLFPLFQMPGPREQHDPHGGTPGYYREGFLQVQYAVDRAIMMA 222

  Fly   243 TSHKSL------PTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQV 301
            .:..:.      ..:.:.|||......|..:..:...:|.::::.|.:.|...|..||.||:.::
Zfish   223 YNRSAAMALFDQTQVLLSRFPYPAFIYDVFILAIQNQLPLLLVLSFTYTALNIVRAVVQEKERKL 287

  Fly   302 RQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNC 366
            ::::..|.:.|.:|:.:|:|...::..||...:..|..::...:..|||.:...::.:.|..:..
Zfish   288 KEYMRMMGLSNWLHWSAWFLMFFLFLSISIFFVTVLFCVKVSPNGAVLTYSDPTLVFVFLLVFAI 352

  Fly   367 AAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIE 431
            :.:.|:.|::.||..|..|......::.:||:|...|....:...||.:..:..:.||...:..:
Zfish   353 STINFSFMISVFFSRANVAAAAGGFIYFLSYLPYVFLWPRYDLLSHAQKVSACLISNVAMAMGAQ 417

  Fly   432 FL---------IERESIVHITWEDSGYRLNYDGGHITVTASSWIFMLNALVYCAIGLYVD----- 482
            .:         |:..::......|..:.|....|         :.:|:||:|..:..||:     
Zfish   418 LIGMFEGKGTGIQWHNLFEAVTVDDDFSLAQVIG---------LLLLDALLYGLVAWYVEAVFPG 473

  Fly   483 ---------------MWRGGDRSGKKMKKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYEV 532
                           .|....|.....:|.:     :||              |...:..:..|.
Zfish   474 EYGVPQPWYFFILPSYWCSSPRVAFLKEKED-----EED--------------AEKASKGEFMEE 519

  Fly   533 EPSHRRFKLKIKKLCKRF--ATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPS 595
            ||:.....:|||:|.|.|  ....:.|:...:.|::|.::|||:||||.||:|.|.:|.||..||
Zfish   520 EPAGLVAGVKIKRLAKVFKVGNKSKEAVRDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPS 584

  Fly   596 RGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLN 660
            .|...|:.::|..:.......||:...||:|....||.::|.|..::|| :...:|.|:.:..:.
Zfish   585 SGRAYINGYDICQDMALIRRSLGLCPQHDVLFDNLTVREHLLFYTQLKG-YPREKIPGEVDRIIR 648

  Fly   661 VLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRT 725
            :|.:...:..:.:||:......:||..|.:|:|.::::|:..|.:|...:...|:|:..||..||
Zfish   649 ILNLEDKRNAKCKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRT 713

  Fly   726 IILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSY 790
            |:|.::....|:.:.||:|||::|||:|.|:..||||.||.||.:..||.......|:..:::.|
Zfish   714 ILLTTHFMDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVIVKDAFCNVSEITRLVHMY 778

  Fly   791 MPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFG-CEDN 854
            :|:.::|...|.:::::|..:...:|.:|..:||.|..:||:.|:....|:|||:|||.| ..|:
Zfish   779 VPDATLESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKLVDS 843

  Fly   855 D------QSGAFQ------SHE---------NAQVLLEEYYSTLAEANEKGR----RTGWKLFFL 894
            .      |..|.|      ||:         :....:.::..:....:|.|.    .||.:|:..
Zfish   844 SLDIQAIQLPALQYQHERRSHDWTMDDSSSISGMTDVTDFTDSCTMISEDGSNIKLNTGARLYMQ 908

  Fly   895 HGRAVIYKRWIAAHRHW--------IVLIFEVLAMALVAVCTFS--------SIFIYGKNY---- 939
            ...|:..||.:.:.|:|        :.|||.|||:.:......|        ::..||:.:    
Zfish   909 QFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVLALVVARSLPSSHSSPQLRLALKQYGQTHVPVA 973

  Fly   940 ---ELEPLTFNLSQLHTVDAFVELFSEEEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLTQ 1001
               ...||...|::::|    .:|.|:..                   :|.......:.|.|...
Zfish   974 VEANAGPLASLLAEIYT----TQLPSQNA-------------------IAAPNITDFSEYVLYNA 1015

  Fly  1002 NQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLPF 1066
            .:.....|...:.||.|....|..:|||...|:...||.:|.||:.:.|....|:|.....|:| 
Zfish  1016 QREGGAFNEHCVVGAAFRSSDVIGYFNNQGYHTPATALMLVDNALFKLLAGPNASIQTGNDPMP- 1079

  Fly  1067 RTAINTFPP--SSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFT 1129
            |....|...  |....|..:|..:.:.:..:...||:.:::||....|..|.::||.:.::|...
Zfish  1080 RNVSETAQSQLSESQTGFAIAINLMYGMASLASTFALLLVSERSVKSKHVQQVSGVYLTNFWFSA 1144

  Fly  1130 VLYDLLFLLIFCACVVVM-----VALYENPNH--DVMLYGYISVTLMLGGFWVILLAYLMASLCR 1187
            :|:||:..|:.|..::|:     |..:...||  ||:.      .|:|.|:.||.|.|||:.|..
Zfish  1145 LLWDLINFLLPCLLMLVVFRVFSVKAFVAQNHLVDVLF------LLLLYGWAVIPLMYLMSFLFS 1203

  Fly  1188 NPCYGFLWLCGINSI-GLVCF-SQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYEFKLICMDP 1250
            .....:..|...|.| |...| :....|.||..||.        ::.::.|:|:|:....:.|..
Zfish  1204 TAATAYTRLTIFNIISGTATFLAVTIMTIPELNLLH--------LSHLLDKVFLIFPNYCLGMSF 1260

  Fly  1251 VVNFTSVEVFK-CNSIP---------NCCIKSNYGTF-TAGIYHDLVILTLLDIILLACLFVSEY 1304
            ...:.:.|:.. |.|.|         |...:.||.:. ..|:...||.|:|..::.:..||:.|.
Zfish  1261 TEFYQNYEMITFCTSSPLAKYICKYYNITYQMNYFSMEEPGVGRFLVALSLQGVVFIILLFLIEL 1325

  Fly  1305 HSI-LGFADCR------LDTRTNESPDSNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAA 1362
            ..| |....||      |.......|:....:.....:|  :...:|:....|.|..:|.||..:
Zfish  1326 RCIRLLLNLCRRRKKALLLAEEALQPEDRDVAEERKRVL--ECQPVVESMVGSPLVVQELSKMYS 1388

  Fly  1363 VGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNT 1427
            .|..:::..|       |...:.|.||..:.|.|.:||||..|::..:..:.:|..:|..||:.|
Zfish  1389 GGQSLLAVDR-------LSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESITSGDAFIDGYSILT 1446

  Fly  1428 HRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRM 1492
            ...:..:.:|||||.|::....|.||.|.::|.|:|...:......|.:||.:.|.|..::.||.
Zfish  1447 DVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVTACVENVLRSLLLEPHADKLVRS 1511

  Fly  1493 CTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAER 1557
            .:.|..|:|....|::|.|.:|.:|....|:||..:|::....:..:..|.:.:.|..:..:.|.
Zfish  1512 YSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITRTRESGKAIIITSHSMEECEA 1576

  Fly  1558 LSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKF 1622
            |..|..:::.||...:.........:.|||.|    ..||.....:..:...|           |
Zfish  1577 LCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTL----LAKVRVETELEESDLQL-----------F 1626

  Fly  1623 SAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVG-FQIF 1686
            ..|:|..||.::|..|....:.:.|...|.|::::|..|.....:.:||||.:::..|.. |..|
Zfish  1627 KDFIESTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYSIEDYCVSQISLEQVFLSF 1691

  Fly  1687 TYDQH 1691
            ...||
Zfish  1692 AQFQH 1696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 43/225 (19%)
CcmA 541..848 CDD:224054 100/308 (32%)
ABC_subfamily_A 541..761 CDD:213230 72/221 (33%)
ABC2_membrane_3 911..>1189 CDD:289468 73/309 (24%)
ABC2_membrane <1080..>1188 CDD:304374 32/114 (28%)
ABC_subfamily_A 1370..1577 CDD:213230 56/206 (27%)
PRK14255 1371..1586 CDD:172743 56/214 (26%)
abca3bXP_009297489.1 AAA 1..>95 CDD:333001 23/114 (20%)
AAA <122..1695 CDD:333001 404/1680 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582227
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

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