DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and abca7

DIOPT Version :10

Sequence 1:NP_608444.2 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_009304071.3 Gene:abca7 / 561460 ZFINID:ZDB-GENE-050517-6 Length:2328 Species:Danio rerio


Alignment Length:2031 Identity:402/2031 - (19%)
Similarity:757/2031 - (37%) Gaps:543/2031 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPI-----------DLDRSW-------- 68
            :|||..:|...:.|||  :..|:  :.|....:.|:...:           |:..:|        
Zfish   372 SNPLSRIVWRGIKPLF--IGKLL--YTPDTPITRTIMSEVNKTFQDFEILKDVHEAWQEVGPRIK 432

  Fly    69 --------MQMVEKLEKARQVADTYNVK-----------------GNPFTPH---LVIGWAPKRY 105
                    :::::.|.:..:||...|::                 .:|.||.   ..:.|    :
Zfish   433 TFMESSVEIRLLQDLLRRPEVAVIVNMRLENTSWTASRIARFLSTQDPDTPRKDGAQLTW----F 493

  Fly   106 GIFQAM------MRRVQK-----QIEPMTSVGFEDCEEMRESVIENGLFAGLCFDGSPFVEDQVF 159
            .::|.:      :..:.|     ::|.:|:.|     ||.|..:|             .:||:.|
Zfish   494 DLYQDLNNTFTTLSELTKCFSLNKLEGLTTEG-----EMVERALE-------------LLEDRQF 540

  Fly   160 EEDTL-----ESYSNIQPMLNYTILLPSELRMLDGDFRMAN------WMTLYNDDPNTFVLTRLN 213
            ....:     .|.|.:.|.:.|      ::||...|....|      |      ||....     
Zfish   541 WAGIVFLLPNSSSSVLPPHVKY------KIRMDIDDVTRTNKIKDKFW------DPGPAA----- 588

  Fly   214 QPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLPT-IQIRRFPITGREQDPLMGNLNYGMPFI 277
            :|:..  :.||..||:.:|..|..:...|.:.|...| |.:::.|......|..:..||..:|..
Zfish   589 EPFSD--MRYVWGGFVYVQDLVERAVTRLLTGKEAKTGIYVQQMPYPCFVDDVFIRVLNRSLPLF 651

  Fly   278 IIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRW 342
            :.:.:::...:.:..||.||::::::.:..|.:|:.:.:.||::...:..:.|:.::.|.||  |
Zfish   652 MTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLGSGMLWFSWFISSYLPFLFSAALLIAALK--W 714

  Fly   343 DQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNL 407
            ..                :..|:..||.| ..:|||      |...:.:.:::|   ||....||
Zfish   715 GD----------------ILPYSDPAVVF-FFLAAF------ATATIMLCFLIS---TFFSRANL 753

  Fly   408 EGNIHALRYVSYALPNVVATLVIEFLIERESIV---------------HITWEDSGYRLNY---- 453
            ......|.|.:..||.|:.....|:|.....|:               ...:|:.|..:.:    
Zfish   754 AAACGGLIYFTLYLPYVLCVAWREYLTSTHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLK 818

  Fly   454 ----DGGHITVTASSWIFMLNALVYCAIGLYVDMWRGGDRSGKKMKKP---------------NT 499
                :|...:...|..:...:||:|.....|::....|...   :.:|               ..
Zfish   819 SSPMEGDTYSFNTSIMMLYADALIYALATWYIEAVFPGQYG---IPRPWYFIFQLNYWGGVPLEL 880

  Fly   500 NASVQEDPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWN 564
            ...:...|..|:              ..:| |.||::....:.|:.|.|.:....:.|:|..:..
Zfish   881 GLPIPPAPREEQ--------------DARI-EAEPTNLILGVSIRNLVKIYKKGAKLAVNHLNIK 930

  Fly   565 VYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTG 629
            .||.::|..:||||.||:|.:.||.||..|:.||:.:...:|:::.......||:...|::|...
Zfish   931 FYEGQITSFLGHNGAGKTTTMSILTGLFPPTAGTIYVKGMDIRSDMDIIRRTLGVCPQHNVLFDI 995

  Fly   630 FTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQIGGLKTKRI---RTLTDRDLCLVSICCAFVG 691
            .||.:::.|..|:||:... |::.:.|   ::|:..||:.||.   :.|:......:|:..||:|
Zfish   996 LTVEEHVWFYGRMKGMSLE-EVNKEMN---SLLEDVGLQHKRFEQTKNLSGGMQRKLSVAIAFIG 1056

  Fly   692 NSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGT 756
            .|.::::|:..:.:|..::..:|:|:.:.:..|||||.::....|:.:.||:||:|.|:|.|.||
Zfish  1057 GSKVVVLDEPTAGVDPYSRRGIWDLLLKYREGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGT 1121

  Fly   757 KPFLKNMYGHGYRLTCVKGKNYK----------------RDE---------------------LF 784
            ..|||...|.||.||.||.:.::                :|.                     |.
Zfish  1122 PLFLKARLGTGYYLTLVKREMHRTPSNTSSGKIPSAASPKDSDSSVSDDTGLGSEENGFDVAALM 1186

  Fly   785 GMMNSYMPNMSIERDIGYKVTFVLENKFEDQ--FPMLIDDLEENMQQLGVVSFRIRDTSMEEIFL 847
            .:...|:|:..:..|||.:....|.|...:.  ..:.:::|::...:.||||:.:.||::|||||
Zfish  1187 ALAQQYVPDAQLVEDIGREAVINLPNAASEDGTLALFLNELDKRQGEFGVVSYGLSDTTLEEIFL 1251

  Fly   848 RFGCE---DNDQSGAFQSHENAQVLLEE-----YYSTLAEANEKGRRTGWKLFFLHG-------- 896
            |...|   |.|......|.|......|:     ..|...||.|....:|      .|        
Zfish  1252 RVAEETGVDADPGDVPVSQEPQGAPSEDRDAARKRSIRKEAQETDPLSG------DGQSDSAPLT 1310

  Fly   897 ---------RAVIYKRWIAAHRH------WIVL--IFEVLAMALVAVC----TFSSI----FIYG 936
                     ||:..||...|.|.      .|||  :|.::|:....:.    .:.|:    ::||
Zfish  1311 GCFHTCQQLRALFTKRLKYAFRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYG 1375

  Fly   937 KNYE-------------------LEP----------------------------LTFNLSQL-HT 953
            :.:.                   |:|                            :.:::.|| |.
Zfish  1376 EQFTFFSNDAPQDPAMQNLLKALLDPPGFGTKCMQPNGDTECLEKAETKFVRPQIPYSMWQLFHN 1440

  Fly   954 VDAFVELFSEE-----EDVK----------------DMHAYYTELL----------YWYDAHVAT 987
            .:..:|..|.|     |.::                .|.....::|          |....:...
Zfish  1441 GNFSIEKPSPECECSTEKIRRMLPDCPEGAGGVPPPQMQQITGDILQNLTGRNISDYLIKTYPQI 1505

  Fly   988 LTKN----------RHNAYALLTQNQFTAH-----------VNSRY-----------------IF 1014
            |.|:          |:..::|..::..|..           :..||                 :.
Zfish  1506 LKKSLKTKKWVNEFRYGGFSLGAKSSQTVSDPHHLEESVLAIRRRYNIAENGSLDQLLQRLPDVL 1570

  Fly  1015 GATFDQKIVTAWFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLPFRTAINTFPPSSH- 1078
            .....|..|..||||...|:....:|:::|.:.|             |.||.:|....:..::: 
Zfish  1571 SGLTSQNNVKVWFNNKGWHAMASFVNIMNNGLLR-------------ANLPPKTERRKYGITAYN 1622

  Fly  1079 ----------------TFGGCLAFGIC--FVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSY 1125
                            |....:...||  |.::|:..:|.:::|.||.|..|..||::||:...|
Zfish  1623 HPLNLTKEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVSGVKPILY 1687

  Fly  1126 WTFTVLYDLLFLLIFCACVVVMVALYENPNHDVMLYGYIS--------VTLMLGGFWVILLAYLM 1182
            ||...::|::...:....||.:...::..:       |:|        :.|:|.|:.:..|.|..
Zfish  1688 WTTNYVWDMVNYTVPATMVVFIFISFQQES-------YVSEKNLPALVLLLLLYGWSITPLMYPA 1745

  Fly  1183 ASLCRNPCYGFLWLCGIN-------SIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMI 1240
            :.:...|...::.|..||       |:.......|...|            :..|..::.|:|:|
Zfish  1746 SFIFSVPSTAYVVLTSINLFIGINGSVATFVLELFVDEH------------LNEVNRILKKVFLI 1798

  Fly  1241 YEFKLICM-----DPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAG-IYHDLVILTLLDIILLACL 1299
              |...|:     |...|....:.|:     ....|.|....:.. :..:|..:.:..|:.....
Zfish  1799 --FPHFCLGRGLIDMAKNQAMADAFQ-----RLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFLFT 1856

  Fly  1300 FVSEYHSILGFADCRLDTRTNESPDSNQESRAFP--GILSNDTAALVDKEHTSRLNEEERSKYA- 1361
            .:.:|...:.|              |.......|  |:...|.|           .|.||.|.. 
Zfish  1857 VLLQYKFFVNF--------------SRWSGFVLPPLGMEDEDVA-----------RERERVKNGR 1896

  Fly  1362 AVG-------IGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLW 1419
            |:|       :..|.|..|...:..|...:.:.||..:.|.|.:|||:..:::..:|::..|:.:
Zfish  1897 ALGDILILSDLSKVYKAGRKPAVNRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTRITYGEAF 1961

  Fly  1420 IHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTP 1484
            :.:.||.|...:.::::|||||.|::....|.||.|..:|.|:|.......::::..::.:||:.
Zfish  1962 LSNQSVLTEMEKVHQLMGYCPQFDAIIDLLTGREHLEFYARLRGVPESYVEKVAQWGVQKLGLSQ 2026

  Fly  1485 CWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTM 1549
            ..:|.....:.|..|:|..|.|::|:..:|.:|....|:||..||.:.....::...|.|.:.|.
Zfish  2027 YADREAGGYSGGNKRKLSTAIALIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVVKEGRSVVLTS 2091

  Fly  1550 LTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHF 1614
            .:..:.|.|..|..:::.|:...:..:......:..||.:.:|...                   
Zfish  2092 HSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLST------------------- 2137

  Fly  1615 PMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNM 1679
            |.:......|:::..||...|.....:.:.:.||..|.:.:.:|..|..:..|:.|.||.:::..
Zfish  2138 PSAEPCPVDAYIQNSFPGIQLKERHQNVLQYQLPSQTCSLARVFEVLSNNYEELGIADYSVSQTT 2202

  Fly  1680 L-VGFQIFTYDQHQDN 1694
            | ..|..|..||..|:
Zfish  2203 LDQVFVNFAKDQTDDD 2218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_608444.2 rim_protein <223..1689 CDD:130324 355/1755 (20%)
ABC_subfamily_A 541..761 CDD:213230 67/222 (30%)
abca7XP_009304071.3 None

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