Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296394.1 | Gene: | abca1a / 558924 | ZFINID: | ZDB-GENE-031006-12 | Length: | 2268 | Species: | Danio rerio |
Alignment Length: | 2041 | Identity: | 406/2041 - (19%) |
---|---|---|---|
Similarity: | 772/2041 - (37%) | Gaps: | 539/2041 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 MNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDRSWMQMVEKLEK 77
Fly 78 ARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIEPMTSVGFEDCEEMRESVIENGL 142
Fly 143 FAGLCFDGSPFVEDQVFEE-----DTLESY------SNIQPMLNYTILLPSELRMLDGDFRMANW 196
Fly 197 MTLYNDD--PNTFVL---------------TRLNQ-------------PYEGGFVGYVREGFIRL 231
Fly 232 QKSVSESFL-VLTSHKSLPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVS 295
Fly 296 EKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILV 360
Fly 361 LFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVV 425
Fly 426 ATL--------VIEFLIERESIVHITW---------EDSGYRLNYDGGHITVTASSWIFMLNALV 473
Fly 474 YCAIGLYVD--------------------MWRGGDRSG-----KKMKKPNTNA-SVQEDPYHERG 512
Fly 513 DSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHN 577
Fly 578 GCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRV 642
Fly 643 KGLHNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDK 707
Fly 708 RTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTC 772
Fly 773 VKGKNY---------------------KRDE--------------------------LFGMMNSY 790
Fly 791 MPNMSIERDIGYKVTFVL--ENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRF---- 849
Fly 850 GCEDNDQSGAFQSHENAQVLLEEYYSTL------------AEANEKGRRT--------------- 887
Fly 888 GWKLFFLHGRAVIYKRWIAAHRH---------------WIVLIFEVL------------------ 919
Fly 920 -------------------------AMALVAVCT-------------------------FSSIFI 934
Fly 935 YGKNYELE---PL----------------------------------TFNLSQLHTVDAFVELFS 962
Fly 963 E--EEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFT---AHVNSRYIF--GATFDQ 1020
Fly 1021 KI---------------VTAWFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLP----- 1065
Fly 1066 FRTAINTF--------PPSSH----TFGGCLAFGIC--FVLTFIWPAFAIYMITERGSLLKKQQF 1116
Fly 1117 LAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNHDVMLYGYISVT--------LMLGGF 1173
Fly 1174 WVILLAYLMASLCRNPCYGFLWLCGIN-SIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKL 1237
Fly 1238 FMIYE--------------FKLICMDPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVIL 1288
Fly 1289 TLLDIILLACLFVSEYHSILGFADC----RLDTRT----NESPD-SNQESRAFPGILSNDTAALV 1344
Fly 1345 DKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVN 1409
Fly 1410 ETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSE 1474
Fly 1475 ALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQ 1539
Fly 1540 AMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMS 1604
Fly 1605 RATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMN 1669
Fly 1670 IEDYFITRNML-VGFQIFTYDQHQDN 1694 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 46/233 (20%) |
CcmA | 541..848 | CDD:224054 | 97/355 (27%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 67/219 (31%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 78/431 (18%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 25/117 (21%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 47/206 (23%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 47/214 (22%) | ||
abca1a | NP_001296394.1 | rim_protein | 1..2233 | CDD:130324 | 406/2037 (20%) |
ABC_subfamily_A | 904..1122 | CDD:213230 | 67/219 (31%) | ||
ABC_subfamily_A | 1919..2139 | CDD:213230 | 51/236 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |