DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abch1

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_021328839.1 Gene:abch1 / 558667 ZFINID:ZDB-GENE-050517-42 Length:713 Species:Danio rerio


Alignment Length:738 Identity:138/738 - (18%)
Similarity:254/738 - (34%) Gaps:204/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 HERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVL 573
            ||.....|...|....:.|...::|.......:....:|:.:  .....||..:..:.:.::..|
Zfish     7 HEALSGSTEMEQRSLESGTMKTDLEAGSFSAAIHCHDVCRSY--GKLKVLNNLNLTLPQGQIYGL 69

  Fly   574 MGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELG--IAF-GHDM---------- 625
            :|.:||||:||||.:.|.::.|||.:.:               ||  .|| ||::          
Zfish    70 LGPSGCGKTTLLKCIVGTLKISRGHITV---------------LGKPPAFPGHEVPGKMVGYMPQ 119

  Fly   626 ---LLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVSICC 687
               |...||:.:.|.|..|:.||.:. |.:.:.::.::.|.: ..|...::.|:......||:..
Zfish   120 DIALYNEFTISNTLWFFGRIHGLSSK-ETEARMSFLIDFLDL-PQKHSLVKNLSGGQRRRVSLGA 182

  Fly   688 AFVGNSPIILIDDVHSDLDKRTQSLVW-NLINEEKSKRTIILVSNSPALAENIADRMAIMSNGEL 751
            |.:.|..::::|:....:|...::.:| :|:...:..:..|:::.........|:.:.:|.||.|
Zfish   183 ALLQNPKLLILDEPTVGVDPVLRAKIWQHLVEIVRGGQVSIIITTHYIEEARQANTVGLMRNGRL 247

  Fly   752 KCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQF 816
            ...|..                       |.:....|:                           
Zfish   248 LAEGPP-----------------------DAVMKQHNA--------------------------- 262

  Fly   817 PMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEAN 881
                                   .::|..||:. |||:||||..||.:..  ||:...|..:..:
Zfish   263 -----------------------ATLETAFLQL-CEDSDQSGPKQSPQGR--LLDSSPSPDSMRD 301

  Fly   882 EKGR--------------RTGWKLFFLH-------GRAVIYKRWIAAHRHWIVLIFE----VLAM 921
            |...              :..||:...|       ..|::.|..:...|....|.|:    |:.:
Zfish   302 EIREPILRKSTSEEMPKCKADWKVRARHIIPKWSNIAALMIKTMVRMRRLPGSLCFQFLLPVIQI 366

  Fly   922 ALVAVCTF---SSIFIYGKNYELEPLTFNLSQLHTVDAFVELFSEEEDVKDMHAYYTELL----- 978
            .|:.:|..   .:|.:...|.|..|..|:.|.|.        |.:...:..:...:::..     
Zfish   367 CLMCLCIGGDPKNIDVAVVNNESSPSAFSRSLLS--------FLDNTSINQVSLSHSDAFDGIRN 423

  Fly   979 --YWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYALNV 1041
              ||      .:.:...|..:.||:......|:...:.|.:     |.||.:......|......
Zfish   424 GEYW------GVIEFGENFTSYLTKRMLQPRVSREVVEGGS-----VHAWLDLTNRQIALMLQKK 477

  Fly  1042 VHNAVARHLFDEEATIDVTLA-PLPFRTAI----NTFPPSSHTFGGCLA--FGICFVLTFIWPAF 1099
            :|.|....:.....::...:| |:.|...|    ||...:..|.|..|:  |.:...||      
Zfish   478 LHQAFEAFMEKRLGSMSYMVAVPIKFEEPIYGSKNTDFTTFVTPGAVLSITFYLAVGLT------ 536

  Fly  1100 AIYMITERGSLLKKQQFLAGVRVCSYWT---------FTVLYDLLFLLIFCACVVVMVALYENPN 1155
            |:..:.||...|..:.::||  |.|..|         |.:...::.||||...|      :..||
Zfish   537 ALSFVLERKEGLLDRCWVAG--VSSLETMLAHLFSQLFVISVQIILLLIFTLLV------FNIPN 593

  Fly  1156 HD--------VMLYGYISVTLML 1170
            ..        ::|.|...::..|
Zfish   594 EGSLALVISLIVLQGVTGISFGL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468
CcmA 541..848 CDD:224054 54/323 (17%)
ABC_subfamily_A 541..761 CDD:213230 50/236 (21%)
ABC2_membrane_3 911..>1189 CDD:289468 58/298 (19%)
ABC2_membrane <1080..>1188 CDD:304374 25/110 (23%)
ABC_subfamily_A 1370..1577 CDD:213230
PRK14255 1371..1586 CDD:172743
abch1XP_021328839.1 CcmA 38..>261 CDD:224054 51/264 (19%)
ABC2_membrane_3 352..705 CDD:315386 58/298 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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