Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011033.1 | Gene: | abca4 / 496442 | XenbaseID: | XB-GENE-1000810 | Length: | 2359 | Species: | Xenopus tropicalis |
Alignment Length: | 1935 | Identity: | 390/1935 - (20%) |
---|---|---|---|
Similarity: | 708/1935 - (36%) | Gaps: | 528/1935 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 139 ENGLFAGLCF-DGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYND 202
Fly 203 DPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLPT-IQIRRFPITGREQDPL 266
Fly 267 MGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISS 331
Fly 332 LIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMS 396
Fly 397 YVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIERESIVHITWEDSGYRLNY-------- 453
Fly 454 DGGHITVTASSWIFMLNALVYCAIGLYVD--------------------MW------RGGD---- 488
Fly 489 ----------------------------------RSGK---------------KMKKPNTNASVQ 504
Fly 505 EDPYHER--------GDSFTHQGQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLF 561
Fly 562 SWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDML 626
Fly 627 LTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQI------------GGLKTKRIRTLTDRD 679
Fly 680 LCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMA 744
Fly 745 IMSNGELKCTGTKPFLKNMYGHGYRLTCVK--------GK-----------------------NY 778
Fly 779 KRDELFG-------MMNSYMPNMSIERDIGYKVTFVLENK-FEDQ-FPMLIDDLEENMQQLGVVS 834
Fly 835 FRIRDTSMEEIFLRFGCE-----DNDQSGAFQSHENAQVLLEEYYSTLAEANEKGRRT------- 887
Fly 888 -------------------------GWKLFFLHGRAVIYKRW---IAAHRHW---IVLIFEVLAM 921
Fly 922 ALV------------------------------------AVCTFSSIFI--------------YG 936
Fly 937 KNYE------------LEPLTFN--LSQLHTVD------------------------------AF 957
Fly 958 VELFSE------EEDVKD-MHAYYTELL-------YWYD----------AHVATLTKNRHNAYAL 998
Fly 999 LTQ----NQFTAHVNSRYIFG--ATFDQKIVT-----AWFNNIPLHSAPYALNVVHNAVARHLF- 1051
Fly 1052 ----DEEATIDVTLAPLPFR-------TAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMIT 1105
Fly 1106 ERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNHD-----------VM 1159
Fly 1160 LYGYISVTLMLGG---FWVILLAYLMASLCRNPCYGFLWLCGINSIGLVCFSQFYRTH------- 1214
Fly 1215 ---PESMLLEPTF--------MAMYTVATVICKLF--------MIYEFK-----LICMDPVVNFT 1255
Fly 1256 SVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFADCRLDTRTN 1320
Fly 1321 ESPDSNQE-SRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTL 1384
Fly 1385 AKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEF 1449
Fly 1450 TPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLI 1514
Fly 1515 CVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTE 1579
Fly 1580 TENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMV 1644
Fly 1645 FVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNML-VGFQIFTYDQHQD 1693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 40/224 (18%) |
CcmA | 541..848 | CDD:224054 | 104/358 (29%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 69/231 (30%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 85/435 (20%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 31/121 (26%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 44/206 (21%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 44/214 (21%) | ||
abca4 | NP_001011033.1 | rim_protein | 1..2347 | CDD:130324 | 390/1935 (20%) |
ABC2_membrane | 604..>778 | CDD:304374 | 34/178 (19%) | ||
ABC_subfamily_A | 997..1216 | CDD:213230 | 69/231 (30%) | ||
ABC_subfamily_A | 2013..2233 | CDD:213230 | 49/238 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |