DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and osy

DIOPT Version :10

Sequence 1:NP_608444.2 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster


Alignment Length:222 Identity:64/222 - (28%)
Similarity:104/222 - (46%) Gaps:39/222 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1374 NRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWI-------HDYSVNTHRVQ 1431
            |.||..|:.|:.|.....:.||:..||||||..:|...::|:|::|:       ....|...|  
  Fly    64 NVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPR-- 126

  Fly  1432 CYRMVGYCPQKDSLPSEFTPRE-LLY---IHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRM 1492
                :||.||:.:|..|||.|| |:|   |.||.:|..    .:.:|.||:|:.| |..::.|:.
  Fly   127 ----IGYMPQEIALYGEFTMRETLIYFGIISAMSKGDI----EDRTEFLLKLLNL-PNASKFVKN 182

  Fly  1493 CTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDP---------------TGKRIILMMTSTMQAMG 1542
            .:.||.||:..|.|:|..|:|:.:|....|:||               .|...:::.|..:....
  Fly   183 LSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDECA 247

  Fly  1543 SSFLYTMLTGLDAERLSLRTPLLLEGQ 1569
            .:.:..:|.|  .:.|:..:|..|..|
  Fly   248 QAHMIGLLRG--GKMLAEESPDYLRQQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_608444.2 rim_protein <223..1689 CDD:130324 64/222 (29%)
ABC_subfamily_A 541..761 CDD:213230
osyNP_001034071.1 CcmA 50..285 CDD:440746 64/222 (29%)
YadH 578..773 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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