DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca15

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_796187.2 Gene:Abca15 / 320631 MGIID:2388709 Length:1668 Species:Mus musculus


Alignment Length:1825 Identity:419/1825 - (22%)
Similarity:765/1825 - (41%) Gaps:304/1825 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFLLMNWKNHKLQ------LANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDR 66
            ||.||:.|||..|:      |.:  |::::||:    ::|.:..|..:.:. :.:.:|.|.    
Mouse     7 RKLLLLLWKNFTLKRRKFGTLVS--EIVLVLLL----SIVLLTTRHLLSIK-KIEALYFPD---- 60

  Fly    67 SWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIE-PMTSVGF--- 127
                     :....|...:......|.| ..:.:.|....:.:.:::.|:..:. .|..:||   
Mouse    61 ---------QPISTVPSFFRASVTSFYP-WELAYVPSNIMVVENIVKNVKNDLNLHMKVIGFPSE 115

  Fly   128 EDCEE-MRESVIENGLFAGLCFDGSPFVEDQVFEEDTLES-------YSNIQPMLN---YTILLP 181
            .|.|: .|.:|....:.|.:.| |..|..    ..|.|..       :|:|:..:|   |     
Mouse   116 SDFEDYARSTVNSRNILAAIVF-GHNFAN----SSDPLPKKVKYYLRFSDIKKNINSGAY----- 170

  Fly   182 SELRMLDGDFRMANWMTLYNDDPNTFVLTRL---NQPYE--GGFVGYVREGFIRLQKSVSESFLV 241
                 ..||    .|:|.:     .|...||   ..|||  ||..||:.|||:.:|.::.::  :
Mouse   171 -----YQGD----TWLTKF-----LFHSLRLVGPRNPYEADGGSPGYITEGFLAVQHALDKA--I 219

  Fly   242 LTSHKSLP--------TIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQ 298
            :..|....        ::.|:|||......|.........:|..:...|.|...:.||.:|.||:
Mouse   220 MLHHGGADAAALFNDISLFIQRFPYPAYYHDYFYLFATTFIPLTVACTFFFNHYVLVWSIVWEKE 284

  Fly   299 SQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFC 363
            ::::::.:.:.:.|.:.:|:::...|....|:.:::..:|.::.:.........|..:.|.:|| 
Mouse   285 NRLKEYQLMIGLRNWMFWVAYFFTFLCLYFINIIVMCMVLFVKIEPAPIFQYNDPTLVFIFLLF- 348

  Fly   364 YNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATL 428
            |..:::.|:.||:..|.....|:.:.:.|:.::|.|...:..:.|......:.:.....||....
Mouse   349 YAISSIFFSFMVSTLFNKVSLAMSLGSFLFFLTYFPAVAMHQSFERMPSKQKLIWSFDFNVGMAF 413

  Fly   429 VIEFLIERESIVHITWEDSGYRLNYDGGHITVTASSWIF-------MLNALVYCAIGLYVDMWRG 486
            ...||:..::      :.:|  :.:....::..:.|::|       :.:|.:|..:..|::....
Mouse   414 GFRFLVNTDA------KKTG--MKWSNIFLSTDSDSFLFAYVLGMLLADAFIYGLVAWYIEAVFP 470

  Fly   487 GDRSGKKM------------KKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRF 539
            |:....|.            :.|.....:.:  ::||.:|             |.:|.||:....
Mouse   471 GEYGVPKPWNFFLMHSYWFGEPPQQKLEITQ--FYERVES-------------KYFEAEPTDLTA 520

  Fly   540 KLKIKKLCKRFATND--RPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMIS 602
            .::||.|.|.|..|:  :.|:...|.|:||.:||||:||||.||||.|.||:||..|:.|...:.
Mouse   521 GIQIKHLHKVFQKNNTTKVAIKDLSLNLYEGQVTVLLGHNGAGKSTTLSILSGLYPPTSGEAYVH 585

  Fly   603 SHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQI--- 664
            ..:|..........||:....::|....||.::|.|.||:||:...:.:: ::|..|:...:   
Mouse   586 GEDISQHMDQVRNSLGLCPQQNLLFDHLTVSEHLYFYCRIKGVPQKMYLE-ETNNMLSAFNLMEK 649

  Fly   665 ---------GGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEE 720
                     ||:|.|            ::|..|.:|.|.:.::|:..|.:|..::...|:::...
Mouse   650 CDAFSKSLSGGMKRK------------LAIIIALIGGSKVAILDEPTSGMDPASRRSTWDILQTY 702

  Fly   721 KSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFG 785
            |..|||:|.::....|:.:.||:|||..|.|:|.|:..|||.:||.|..|..||.......|:..
Mouse   703 KQNRTILLTTHYMDEADVLGDRIAIMVRGTLRCCGSSVFLKRLYGVGSHLVMVKEPYCDIAEISK 767

  Fly   786 MMNSYMPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRF- 849
            :::||:|..::|.::|.:::|:|..::..:|..|...||||.:.||:.||.:..|:|||:||:. 
Mouse   768 LIHSYVPTATLETNVGNELSFILPKEYTHRFEALFTALEENQENLGISSFGVSITTMEEVFLKVS 832

  Fly   850 GCEDN------DQSGAFQSHENAQVLLEEY----YSTLAEANEKGRRTGWKLFFLHGRAVIYKRW 904
            ..||:      .||.:..|..|....:|..    :.|.:|.......||..|:....||:..||.
Mouse   833 NLEDSKTDIEATQSPSVGSKGNKNGDVESSGRVGFPTQSEDQNIVFNTGCSLYLQQFRAMFMKRL 897

  Fly   905 IAAHRHWIVLIFEVLAMALVAVCTFSSIFIYGKNYELEPLTFNLSQLHTVDAFVELFSEEEDVKD 969
            :...|:|..::.::|.:.:       |.|:..|::|..........|......:..||       
Mouse   898 MYNWRNWRGILVQILGLII-------STFLLLKSHEFRYKKIRQMNLDEYGQTIVPFS------- 948

  Fly   970 MHAYYTELLYWYDAHVAT--LTKNRHNAYALLTQNQFTAHVNS---RYIFG---------ATFDQ 1020
                     .|..:::.:  ||   |....|...|.....|..   :|:.|         .....
Mouse   949 ---------IWGKSNLTSSLLT---HLENMLKPGNHQLKEVQGDLLKYLEGNDECVHLCVIALSI 1001

  Fly  1021 KIV------TAWFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLPFRTAINTFPPSSHT 1079
            |:|      |..|||...||...:|.|:.|.:...|...:|:|.|...|.| ......:|.|  |
Mouse  1002 KVVANRVNLTVLFNNEAYHSPSLSLTVLDNILFMSLSGSDASITVFNKPQP-SPQRKEWPGS--T 1063

  Fly  1080 FGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACV 1144
            .|..:||.|...:..:...|.|..:|||.:..|..|||:||.:..||...:::||:...|.|..:
Mouse  1064 DGKIVAFKIQLGMALLVSGFCILTVTERHNKTKHMQFLSGVSILVYWLSALVFDLIIFFISCCFL 1128

  Fly  1145 VVMVA-----LYENPNH--DVMLYGYISVTLMLGGFWVILLAYLMASLC--RNPCY----GFLWL 1196
            :||..     :|....|  |.||      .|.|.|:..|.|.||::.|.  .|..|    .|.:|
Mouse  1129 LVMFKYCKFDIYVTDYHILDTML------ILTLFGWSAIPLTYLLSFLFSKSNSAYINLLVFCYL 1187

  Fly  1197 CG-----INSIGLVCFSQFYRTHPESMLLEPTFM-AMYTVATVICKLFMIYEFKLICMDPVVNFT 1255
            .|     :::|.....|.......::.||....: .||.:...|.:..:||..|::|   :....
Mouse  1188 SGTLSLLMDTIIEARISTIMSNSTQTFLLNALLLFPMYNLGKCISEYTVIYRKKMLC---IQQKN 1249

  Fly  1256 SVEVFKCNSIPNCCIKSNYGTF---TAGIYHDLVILTLLDIILLACLFVSE---------YHSIL 1308
            :::...|:   |...|.|..:.   ..|.|  |:.:::...:.|..:|..|         .|..:
Mouse  1250 ALKYLNCS---NKHTKKNIYSLKKPMLGKY--LIAMSIAGFVFLLLIFFWENISWKVKMFIHQHI 1309

  Fly  1309 GFADCRLDTRTNESPDSNQESRAFPGILSNDTAAL-----VDKEHTSRLNEEERSKYAAVGIGIV 1368
            .|..|:               :..|.|:|.:.:..     |:.|....|.:.|:.....|.|..:
Mouse  1310 YFGACK---------------KYKPDIISKELSGTSEDNDVENERREILYQPEKFLNCPVLIKEL 1359

  Fly  1369 SK-YRRNRVL---RDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHR 1429
            :| |.::.::   :::...:.:..|..:.|.|.:||||..:::..|....||.::|...|:..:.
Mouse  1360 TKIYFKSPLILAVKNISLAIQERACFGLLGFNGAGKTTTFQILTGENIPTAGDVFIDGISLTKNI 1424

  Fly  1430 VQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG-HRHRIGRELSEALLRLVGLTPCWNRSVRMC 1493
            |:....:|||||.|:|....|..|::.::|.:.| ..|:| :...:..|..:.|....|..:...
Mouse  1425 VKVRSKIGYCPQFDALLEYMTGWEIMIMYARIWGISEHQI-QPYVKKYLNSLDLESHANSLISTY 1488

  Fly  1494 TTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERL 1558
            :.|..|||..|.|.:|.|.:|.:|....|:||..:|::......::..|.:.:.|..:..:.|.|
Mouse  1489 SEGNKRRLSTAIATMGKPSVIFLDEPSTGMDPRARRLLWDTVIKIRESGKAIIITSHSMEECEAL 1553

  Fly  1559 SLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFS 1623
            ..|..:::.|:|..:.........:.:.|.|    |.||....::.                :|.
Mouse  1554 CTRLSIMVRGRLTCLGSPQYLKNKFGNIYIL----KAKVKSGETLD----------------EFK 1598

  Fly  1624 AFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIFTY 1688
            .|:.:.||.:.|..|....:.:.:|....::.::|..|.|...:.|:|||.|::..|  .|:|..
Mouse  1599 NFITLTFPGSELQQENQGILNYCIPRKNNSWGKVFGILEKAKEQYNLEDYSISQITL--DQVFLS 1661

  Fly  1689 DQHQD 1693
            ...||
Mouse  1662 FADQD 1666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 37/223 (17%)
CcmA 541..848 CDD:224054 103/320 (32%)
ABC_subfamily_A 541..761 CDD:213230 72/233 (31%)
ABC2_membrane_3 911..>1189 CDD:289468 74/306 (24%)
ABC2_membrane <1080..>1188 CDD:304374 36/116 (31%)
ABC_subfamily_A 1370..1577 CDD:213230 52/211 (25%)
PRK14255 1371..1586 CDD:172743 51/218 (23%)
Abca15NP_796187.2 ABC2_membrane_3 144..464 CDD:289468 66/349 (19%)
ABC2_membrane <267..383 CDD:304374 23/116 (20%)
CcmA 522..831 CDD:224054 104/321 (32%)
ABC_subfamily_A 522..743 CDD:213230 72/233 (31%)
ABC2_membrane_3 <1009..1231 CDD:289468 65/230 (28%)
CcmA 1354..1648 CDD:224054 71/314 (23%)
ABC_subfamily_A 1354..1575 CDD:213230 54/221 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838476
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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