Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101191.1 | Gene: | Abca4 / 310836 | RGDID: | 1309445 | Length: | 2290 | Species: | Rattus norvegicus |
Alignment Length: | 2048 | Identity: | 437/2048 - (21%) |
---|---|---|---|
Similarity: | 780/2048 - (38%) | Gaps: | 554/2048 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 WKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHR----SDTVYDPID----LDRSWMQM 71
Fly 72 VEKL----EKARQVADTYNVKGNP--------------FTPHLVIGWAPKR-------------- 104
Fly 105 ---YGIFQAMMRRVQKQIEPMTSVGFEDCEEMRE------SVI-ENGLFAGLCF-DGSPFVEDQV 158
Fly 159 FEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGY 223
Fly 224 VREGFIRLQKSVSESFLVLTSHKSLPTI--QIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPA 286
Fly 287 QLFVWQVVSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHG-VLT 350
Fly 351 QTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFI-------LSNNLE 408
Fly 409 GNIHALRYVSYALPNVVATLVIEFLIE-RESIVHITWEDSGYRLNYDGGHITVTASSWIFMLNAL 472
Fly 473 VYCAIGLYVDM--------------------WRGGD----RSGKKMKKPNTNASVQEDP-YHERG 512
Fly 513 DSFTHQ---GQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLM 574
Fly 575 GHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFI 639
Fly 640 CRVKGL---HNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTD------RDLCLVSICCAFVGNSPI 695
Fly 696 ILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFL 760
Fly 761 KNMYGHGYRLTCV-KGKNYKRD-------------------------------------ELFGMM 787
Fly 788 NSYMPNMSIERDIGYKVTFVLENK-FEDQ-FPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFG 850
Fly 851 CEDNDQSGAF-----QSHE--------NAQVLLEEYYSTLAEANE----------KGR------- 885
Fly 886 -----RTGWKLFFLHGRAVIYKRW---IAAHRHWIVLI-----FEVLAMAL-VAVCTFSSI---- 932
Fly 933 ---FIYGKNYEL----EPLTFNLSQLHTV----DAFVELFSEEEDVKD----------------- 969
Fly 970 -MHAYYTELLYWYDAHVATLTK-------------------------------------NRH--- 993
Fly 994 ---NAYALLTQNQFTAH--VNSRYIFGATFDQKI------------------------------- 1022
Fly 1023 -----------------VTAWFNNIPLHSAPYALNVVHNAVARHLF-----DEEATIDVTLAPLP 1065
Fly 1066 F-RTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFT 1129
Fly 1130 VLYDLLFLLIFCACVVVMVALYENPNHD-----------VMLYGYISVTLMLGG---FWVILLAY 1180
Fly 1181 LMASLCRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLF----MIY 1241
Fly 1242 EFKLICMDPVVNFTSVEVFKCNSIPNCC----------------IKSNYG-TFTAG------IYH 1283
Fly 1284 DLVILTLLDIILLACLFVSEYHSIL--GFADCRLDTRTNESPDSNQESRAFPGILSNDTAALVDK 1346
Fly 1347 EHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNET 1411
Fly 1412 KMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEAL 1476
Fly 1477 LRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAM 1541
Fly 1542 GSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKR-------KVNP 1599
Fly 1600 NVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMV-FVLPLGTTTFSEIFLTLRK 1663
Fly 1664 DAFEMNIEDYFITRNML----VGF---QIFTYD 1689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 45/225 (20%) |
CcmA | 541..848 | CDD:224054 | 112/355 (32%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 76/228 (33%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 78/429 (18%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 30/121 (25%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 51/206 (25%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 51/214 (24%) | ||
Abca4 | NP_001101191.1 | rim_protein | 1..2249 | CDD:130324 | 437/2048 (21%) |
ABC_subfamily_A | 907..1126 | CDD:213230 | 77/245 (31%) | ||
ABC_subfamily_A | 1915..2135 | CDD:213230 | 56/229 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342276 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.750 |