Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943365.1 | Gene: | Abca8 / 303637 | RGDID: | 1307069 | Length: | 1620 | Species: | Rattus norvegicus |
Alignment Length: | 1861 | Identity: | 391/1861 - (21%) |
---|---|---|---|
Similarity: | 732/1861 - (39%) | Gaps: | 450/1861 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 IRKFLLMNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPI---DLDRSW 68
Fly 69 MQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIE--PMTS----VGF 127
Fly 128 EDCEEMRE------SVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRM 186
Fly 187 LDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLPTI 251
Fly 252 QIRRFPITGR--EQDPLM---GNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIG 311
Fly 312 NLIHFVSWYLKGLIYE---MISSLIIAALLK-IRWDQDHGVLTQTPWYILILVLFCYNCAAVAFA 372
Fly 373 IMVAAFFRNAL---NAVRVLTILW-------IMSYVPTFILSNNLEGNIHALRYVSYALPNVVAT 427
Fly 428 LVIEFLIERESIVHITWEDSGYRLNYD----------GGHITVTASSWIFMLNALVYCAIGLYVD 482
Fly 483 M----WRGGDRSGKKMKKPN--------TNASVQE--DPYHERGDSFT------HQGQAIGV-NS 526
Fly 527 TKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGL 591
Fly 592 VEPSRGTVMISSHNIQTERKAASME-----LGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEI 651
Fly 652 DGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNL 716
Fly 717 INEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLT------CVKG 775
Fly 776 KNYKRDELFGMMNSYMP--NMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLGVVSFRIR 838
Fly 839 DTSMEEIFLRFGCE------DNDQSGAFQSHENAQV-LLEEYYSTLAEANEKGRRTGWKLFFLHG 896
Fly 897 RAVIYKRWIAAHRHWIVLIFEVLAMALVAVC--TFSSIFI----YGKNYELEPLTFNLS---QLH 952
Fly 953 --------------TVDAFVELFSEEEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLT--- 1000
Fly 1001 ---QNQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYALNVVHNAV-------ARHLFDEEA 1055
Fly 1056 -TIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTFIWPAF-AIYMITERGSLLKKQQFLA 1118
Fly 1119 GVRVCSYWTFTVLYDL-LFLLIFCACVVVMVALYENPNHDVMLYGYISVTLML----------GG 1172
Fly 1173 FWV--ILLAYLMASLCRNPCYGFLWLCGINSIGL--VCFSQFYRTHPESMLLEPTFMAMYTV-AT 1232
Fly 1233 VICKLFMIYEFKLI-CMDPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLLDIILL 1296
Fly 1297 ACLFVSEYHSILGFADCRLD------TRTN------ESPDSNQESRAFPGILSNDTAALVDKEHT 1349
Fly 1350 SRLNEEE-------RSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVV 1407
Fly 1408 VNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG----HRHRI 1468
Fly 1469 GRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGK----- 1528
Fly 1529 --RIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEV 1591
Fly 1592 RFKRKVNPNVSMSRATWNLINHFPMSP-NKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFS 1655
Fly 1656 EIFLTLRKDAFEMNIEDYFITRNMLVGFQIF---TYDQHQD 1693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 45/243 (19%) |
CcmA | 541..848 | CDD:224054 | 89/319 (28%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 64/224 (29%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 57/328 (17%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 22/121 (18%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 59/217 (27%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 58/225 (26%) | ||
Abca8 | XP_038943365.1 | rim_protein | <261..1597 | CDD:130324 | 333/1531 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342195 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |