DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and Abca12

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_237242.6 Gene:Abca12 / 301482 RGDID:1304586 Length:2595 Species:Rattus norvegicus


Alignment Length:1930 Identity:401/1930 - (20%)
Similarity:764/1930 - (39%) Gaps:455/1930 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FIPVNHRSDTVYDPIDLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMM 112
            :.|.|..:..:.:..::  :..|:.|..||:::..|...:..|.|  ||:....|    :.|..:
  Rat   808 YAPYNPTTKAIMEKSNV--TLRQLAELREKSQEWMDKSPIFMNSF--HLLNQTIP----MLQNTL 864

  Fly   113 RRVQKQIEPMTSVGFEDCEEMRE--------SVIENGL--------FAGLCFD-GSPFVEDQVFE 160
            |....|:....|||.:..|.:::        ..:||.:        .:.|..: .|..:.|::..
  Rat   865 RNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLENNIDIIDQLNTLSSLTVNISSCVLYDRIQA 929

  Fly   161 EDTLESYS-----------------------------------NIQPMLNYTILLPSELRMLDGD 190
            .||::...                                   ::.|::.|||.:..:.......
  Rat   930 ADTVDEMEMIAKQLYKSNELFGSVIFKLPSNGSSHRGFDSERVSLPPIVRYTIRMSLKTAQTTRS 994

  Fly   191 FRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLP--TIQI 253
            .|...|....::.|:.      ||.|        ...||.||.|:..:.:.|.:.::..  .:|:
  Rat   995 IRTKIWAPGPHNSPSH------NQIY--------GRAFIYLQDSIERAIIELQTGRNSQEVAVQV 1045

  Fly   254 RRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVS 318
            :..|.....:|..:.:::|.:|.::::.::.....||.::|.||..::.:::..|.:.:..||.:
  Rat  1046 QAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFA 1110

  Fly   319 WYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNAL 383
            |.::.:.:.:::..|:..:||.     ..:|.:|..:||.|....|:.:.:|.:.:::.||.|..
  Rat  1111 WLIESIGFLLVTIAILIVILKF-----GNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTN 1170

  Fly   384 NAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIERESIVHITWEDSG 448
            .|..:.::::::::.| ||:...:|..:      ||.: .|..:|:........|.....:|:.|
  Rat  1171 IAALIGSLIYVIAFFP-FIVLVTVEDEL------SYVI-KVFMSLLSPTAFSYASQYIARYEEQG 1227

  Fly   449 YRLNYDGGHIT-----VTASSW---IFMLNALVYCAIGLYV--------------------DMWR 485
            ..|.::..:.:     .|:..|   :.:.::.:|..|..||                    ..|:
  Rat  1228 IGLQWENMYKSPVQDDTTSFGWLCCLILADSFIYFFIAWYVRNVFPGTYGMAAPWYFPVLPSYWK 1292

  Fly   486 GGDRSG---KKMKKPN----TNASVQE-DPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFKLK 542
              :|.|   .|.:|.|    ||..:|. :|...:    |....|...|    .|.||...:..:.
  Rat  1293 --ERFGCAEVKHEKSNGLMFTNIMMQSTNPSANK----TSPDCAFPSN----IEPEPKDLQVGVA 1347

  Fly   543 IKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQ 607
            :..:.|.:.:  :.|::..:.|.||..:|.|:|.||.||:|.:.:|.||...:.||:.:...:|:
  Rat  1348 LHGVTKSYGS--KTAVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGATAGTIFVYGKDIK 1410

  Fly   608 TERKAASMELGIAFGHDMLLTGFTVIDYLRFICRV-------KGLHNNIEIDGQSNYFLNVLQIG 665
            |:.......:|:...||:|.:..|..::|.....:       |.||..::         ..|:..
  Rat  1411 TDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKKQLHEEVK---------RTLKDT 1466

  Fly   666 GL---KTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTII 727
            ||   :.||:.||:......:||..|.:|.|.::::|:..:.:|..::..:|::|::.|:.||||
  Rat  1467 GLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTARTII 1531

  Fly   728 LVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRD--------ELF 784
            |.::....||.::||:|.:..|.|:|.|:..:||..:|.||.||..|.|:...|        .:.
  Rat  1532 LSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLDTNAICDTVAVT 1596

  Fly   785 GMMNSYMPNMSIERDIGYKVTFVL---ENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIF 846
            .|:.|::|...::.|||.::.:||   ..|....:..|:..|::.|.:|.:..:.|.||::||:|
  Rat  1597 AMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVF 1661

  Fly   847 LRFGCEDNDQSGAFQSHENAQVL--------------LEEYYSTLAEANEK-----GRRTGWKLF 892
            |.. .:|:.:.|........|..              |....|...:.::|     .|..|:.|.
  Rat  1662 LNL-TKDSQKCGNMSLEHLTQRKVGNPSANGTSTPDDLSVSSSNFTDRDDKVLTRSERLDGFGLL 1725

  Fly   893 FLHGRAVIYKRWIAAHRHW--------IVLIFEVLAMALVAVCTFSSIF--------IYGKNYE- 940
            .....|::.||:....|:|        :.::|...||.|..:...|:.:        |||.:.: 
  Rat  1726 LKKIMAILIKRFHHTRRNWKGLIAQVVLPIVFVATAMGLGTLRDSSNSYPELLISPSIYGNSEQT 1790

  Fly   941 -----LEPLT----------------------------FNLSQLHTVDAFVELF---SEEEDVKD 969
                 .:|.|                            .||.:.:|....::.|   |..::|::
  Rat  1791 AFYANFDPSTNALVSALWNFPGIDNVCLNTSDSQCLKKDNLGKWNTSGEAIDNFGVCSCSDNVQE 1855

  Fly   970 ----------MHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKI-- 1022
                      ...|.::::|       .||......|.:.|.|.|   |..|| .|.:|..|:  
  Rat  1856 CPKFNYSPPHRRTYSSQVIY-------NLTGKHMENYLISTANHF---VQKRY-GGWSFGMKLTN 1909

  Fly  1023 -----VTA----------WFNNIPLHSAPYALNVVHNAV----------ARHLF----------- 1051
                 |||          |::....||.|..||.::|.:          |||..           
  Rat  1910 DLRFDVTAVPVNRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEYDAARHGIIMYSHPYPGVQ 1974

  Fly  1052 -DEEATIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQ 1115
             .|:|||...:..|                   :|..|....:....:|..|::.|..:..|:.|
  Rat  1975 DQEQATISSLIDIL-------------------VALSILMGYSVTTASFVTYIVREHQTKAKQLQ 2020

  Fly  1116 FLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENP-----NHDVMLYGYISVTLMLGGFWV 1175
            .::|:.|..||....:||::|.|:..|..:.::|:::.|     |:    .|.:|:.|:|.|:..
  Rat  2021 HISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSGNN----LGAVSLLLLLFGYAT 2081

  Fly  1176 ILLAYLMASLCRNPCYGFL-WLC-----GINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVI 1234
            ....||:|.|.......|: ::|     |||||  |..|..|....|    :|....:..::..:
  Rat  2082 FSWMYLLAGLFHETGMAFITYVCVNLFFGINSI--VSLSVVYFLSKE----KPNDPTLELISETL 2140

  Fly  1235 CKLFMIYEFKLICMDPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLLDIILLACL 1299
            .::|:|:                        |..|.  .||              |:::      
  Rat  2141 KRIFLIF------------------------PQFCF--GYG--------------LIEL------ 2159

  Fly  1300 FVSEYHSILGFADCRLDTRTNESPDSNQESRAFPGILSNDT------------------------ 1340
              |:..::|.|.........:|:.:.::....|..::|..|                        
  Rat  2160 --SQQQAVLDFLKAYGVDYPSETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFFRKF 2222

  Fly  1341 -----AALVDKE---HTSRLNEEERSKYAAVGIGIVSKYRRNR----------VLRDLDFTLAKS 1387
                 ...||::   ||.||..|.    .|....:|..:|..:          .:.::...:...
  Rat  2223 TSSPVMETVDEDEDVHTERLRVES----GAAEFDLVQLHRLTKTYQLIHKKIIAVNNISLGIPAG 2283

  Fly  1388 ECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCY-RMVGYCPQKDSLPSEFTP 1451
            ||..:.|.|.:||||:.|::..:...::|.:.|.:.|.:...|..: .:||||||:|:|....|.
  Rat  2284 ECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQEDALDDLVTV 2348

  Fly  1452 RELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICV 1516
            .|.||.:|.:.|...:..:|....|||.:.|....:||..||:.|..|:|..|.|::|.|.::.:
  Rat  2349 EEHLYFYARVHGIPEKDIKETVHKLLRRLHLMAYKDRSTSMCSYGTKRKLSTALALIGKPSILLL 2413

  Fly  1517 DGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETE 1581
            |...:|:||..||.:..:.|.......|.:.|..:..:.|.|..|..:::.|:...|..:.....
  Rat  2414 DEPSSGMDPKSKRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKS 2478

  Fly  1582 NYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFV 1646
            .:..|:.::|..|   |..|||...|                .||::.||...|..:....:.:.
  Rat  2479 RFGRGFTVKVHLK---NNKVSMENLT----------------KFMQLHFPKTYLKDQHLSMLEYH 2524

  Fly  1647 LPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVG-FQIFTYDQ 1690
            :|:.....:.||..|..:...:||.::.:::..|.. |..|..||
  Rat  2525 VPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQ 2569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 42/224 (19%)
CcmA 541..848 CDD:224054 89/327 (27%)
ABC_subfamily_A 541..761 CDD:213230 60/229 (26%)
ABC2_membrane_3 911..>1189 CDD:289468 77/384 (20%)
ABC2_membrane <1080..>1188 CDD:304374 28/112 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 58/217 (27%)
PRK14255 1371..1586 CDD:172743 58/225 (26%)
Abca12XP_237242.6 ABC2_membrane_3 <1006..1267 CDD:289468 54/287 (19%)
NosY <1108..1269 CDD:224196 33/173 (19%)
ZnuC 1346..1570 CDD:224046 62/234 (26%)
ABC_subfamily_A 1350..1565 CDD:213230 60/225 (27%)
ABC2_membrane_3 <1913..2174 CDD:289468 68/337 (20%)
CcmA 2253..2567 CDD:224054 81/332 (24%)
ABC_subfamily_A 2254..2477 CDD:213230 59/222 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342227
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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