DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca7

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_997481.1 Gene:Abca7 / 299609 RGDID:1303134 Length:2170 Species:Rattus norvegicus


Alignment Length:2028 Identity:409/2028 - (20%)
Similarity:753/2028 - (37%) Gaps:533/2028 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SYIRKFLL-MNWKNHKLQLANPLELLVILLVPPLF------TLVAVLMRFFIPVNHRSDTVYDPI 62
            ::.||.:. :|....:|.|...|..|..:|.|.:|      |.||:|.:.              :
  Rat   299 NFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQKL--------------L 349

  Fly    63 DLD-RSWMQMVEK----LEKARQVADTYNVKGNPFTPHLVIGWAPKRYG-IFQAMMRRVQKQIEP 121
            |:: ..|.|...|    ||..|...|....:.|....|..:|...:..| |.:.:      .::.
  Rat   350 DVEGTGWQQQTPKGQKQLEAIRDFLDPSRGRYNWQEAHADMGRLAEILGQILECV------SLDK 408

  Fly   122 MTSVGFEDCEEMR--ESVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSEL 184
            :.:|..|:....|  |.:.|..|:||:.|         :..|..|:|.....|.......|..::
  Rat   409 LEAVPSEEALVSRALELLGERRLWAGIVF---------LSPEHPLDSSEPPSPTTTGPGHLRVKI 464

  Fly   185 RMLDGDFRMANWM--TLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFL-VLTSHK 246
            ||...|....|.:  ..::..|:...|..|.         ||..||:.||..:.::.: ||:...
  Rat   465 RMDIDDVTRTNKIRDKFWDPGPSADPLMDLR---------YVWGGFVYLQDLLEQAAVRVLSGRD 520

  Fly   247 SLPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIG 311
            |...:.:::.|......|..:..|:..:|..:.:.:::...|.|..||.||::::|:.:..|.:.
  Rat   521 SRAGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLS 585

  Fly   312 NLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVA 376
            ..:.::.|:|..|...::|:.::..:||:     ..:|..:...::.|.|..:..|.||.:.:::
  Rat   586 RAVLWLGWFLSCLGPFLVSAALLVLVLKL-----GNILPYSHPVVVFLFLAAFAVATVAQSFLLS 645

  Fly   377 AFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVAT-----------LVI 430
            |||..|                       ||......|.|.:..||.|:..           |.:
  Rat   646 AFFSRA-----------------------NLAAACGGLAYFALYLPYVLCVAWRERLPLGGLLAV 687

  Fly   431 EFL------IERESIVHITWEDSGYRLNYDGGH------------ITVTASSWIFMLNALVYCAI 477
            ..|      ...||:..:  |:.|     ||..            .::...|...:|:|::|...
  Rat   688 SLLSPVAFGFGCESLALL--EEQG-----DGAQWHNLGTGPAEDVFSLAQVSAFLLLDAVIYGLA 745

  Fly   478 GLYVDM-----------W----RGGDRSGKKMKKPNTNASVQEDPYHERGDSFTHQGQAIGVNST 527
            ..|::.           |    |.....|....|.:..|...:||                    
  Rat   746 LWYLEAVCPGQYGIPEPWNFPFRRSYWCGPGPPKSSVLAPAPQDP-------------------- 790

  Fly   528 KIYEVEPSHRRFK-LKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGL 591
            |:...||...... :.|:.|.|.|..:.:|||...:.:.||..:|..:||||.||:|.|.||:||
  Rat   791 KVLVEEPPPGLVPGVSIRGLKKHFRGSPQPALRGLNLDFYEGHITAFLGHNGAGKTTTLSILSGL 855

  Fly   592 VEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSN 656
            ..||.|:..|..|::||...|....|||...:::|....||.:::.|..|:||: :...||.:..
  Rat   856 FPPSSGSASILGHDVQTNMAAIRPHLGICPQYNVLFDMLTVEEHVWFYGRLKGV-SAAAIDSEQE 919

  Fly   657 YFLNVLQIGGLKTKR---IRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLIN 718
            :.:..:   ||..||   .|.|:......:|:..||||.|.::::|:..:.:|..::..:|.|:.
  Rat   920 HLIRDV---GLIPKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLL 981

  Fly   719 EEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKG-------- 775
            :.:..||:||.::....||.:.||:|::::|.|.|.|:..||:...|.||.||.||.        
  Rat   982 KYREGRTLILSTHHLDEAELLGDRVAMVASGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHD 1046

  Fly   776 -----KNYKRDELFG--------------------------------------MMNSYMPNMSIE 797
                 ::.:|::..|                                      ::..::|...:.
  Rat  1047 LKGDTEDPRREKKSGSEGKTADTVLTRDGPHRSSQVPAPDAVPVTPSAALILELVQRHVPGAQLV 1111

  Fly   798 RDIGYKVTFVL--ENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRF---------GC 851
            .::.:::...|  ....:..|..:..:|::.:::||:..:.|.||::|||||:.         |.
  Rat  1112 EELPHELVLALPYAGALDGSFATVFQELDQQLERLGLTGYGISDTNLEEIFLKVVEEAHAHGEGG 1176

  Fly   852 EDNDQ---------------SGAFQSHENAQVLLEEYYSTLAEANEKGRRTGWKLFFLHGRAVIY 901
            :...|               :...::.|.|:::|:. .:....|....:..||.|.....||:::
  Rat  1177 DPRQQQHLLTATPQPHTGPEASVLENGELAKLVLDP-QAPKGSAPTTAQVQGWTLTCQQLRALLH 1240

  Fly   902 KRWIAAHRHWIVLIFEVLAMAL-VAVCTFSSIFI--YGK--NYELEPLTFNLSQLHTVDAFVELF 961
            ||::.|.|....|..:::..|| |.:..|.::.:  :|:  ..:|.|..:...        |..|
  Rat  1241 KRFLLARRSRRGLFAQIVLPALFVGLALFFTLIVPPFGQYPPLQLSPAMYGPQ--------VSFF 1297

  Fly   962 SEE---------------------------------EDVKDMHAYYT------------------ 975
            ||:                                 |....:..|:|                  
  Rat  1298 SEDAPADPNRMKLLEALLGEAGLQDPSVQGKGSRGSECTHSLACYFTVPEVPPDVASILASGNWT 1362

  Fly   976 --------------------------------ELLYWYDAHVATLT-KN---------------- 991
                                            :.:..:...|..|| :|                
  Rat  1363 PDSPSPACQCSQPGARRLLPDCPAGAGGPPPPQAMAGFGEVVQNLTGRNVSDFLVKTYPSLVRRG 1427

  Fly   992 ----------RHNAYAL--------------LTQNQFTAHVNSRYIFGATFDQKI---------- 1022
                      |:..::|              .|..:..|.::.:.  |.|.|:.:          
  Rat  1428 LKTKKWVDEVRYGGFSLGGRDPDLPSGREVVRTVAEMRALLSPQP--GNTLDRILNNLTQWALGL 1490

  Fly  1023 -----VTAWFNNIPLHSAPYALNVVHNAVARHLFDEEAT------------IDVTLAPLPFRTAI 1070
                 :..||||...|:....:|..:|.:.|......:.            :::|...|...|.|
  Rat  1491 DARNSLKIWFNNKGWHAMVAFVNRANNGLLRAFLPSGSVRHAHSITTLNHPLNLTKEQLSEATLI 1555

  Fly  1071 NTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLL 1135
                  :.:....::..:.|.::|:..:|.:.:|.||.:..|..|.::|:....||....|:|:.
  Rat  1556 ------ASSVDVLVSICVVFAMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWLGNFLWDMC 1614

  Fly  1136 FLLIFCACVVVMVAL------YENPNH------DVMLYGYISVTLMLGG---FWVILLAYLMASL 1185
            ..|: ..|:||::.|      |..|.:      .::|||:....||...   |.|...||::.: 
  Rat  1615 NYLV-AVCIVVLIFLAFQQKAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLT- 1677

  Fly  1186 CRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLEPTFMA-------MYTVATVICKLFMIYEF 1243
            |.|     |:: ||||               ||   .||:.       :..|:.::.::|:|  |
  Rat  1678 CIN-----LFI-GINS---------------SM---ATFVLELLSDQNLQEVSRILKQVFLI--F 1716

  Fly  1244 KLICM-----DPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLLDII------LLA 1297
            ...|:     |.|.|....:.|:         :.....|.:.:..|::...||.::      ||.
  Rat  1717 PHFCLGRGLIDMVRNQAMADAFE---------RLGDKQFQSPLRWDIIGKNLLAMVAQGPLFLLI 1772

  Fly  1298 CLFVSEYHSILGFADCRLDTRTNESPDS--NQESRAFPGILSNDTAALVDKEHTSRLNEEERSKY 1360
            .|.:...:.:|.....||.....|..:.  .:..|...|....|...|.|               
  Rat  1773 TLLLQHRNRLLPQPKSRLPPPLGEEDEDVVRERERVTKGATQGDVLVLRD--------------- 1822

  Fly  1361 AAVGIGIVSKYR--RNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDY 1423
                  :...||  |:..:..|...:...||..:.|.|.:|||:..::|..:|..::|:..:..:
  Rat  1823 ------LTKVYRGQRSPAVDHLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGH 1881

  Fly  1424 SVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG-HRHRIGRELSEALLRLVGLTPCWN 1487
            :|.......:|.:|||||.|::....|.||.|.:.|.|:| ...::.:.....|:|| ||....:
  Rat  1882 NVAQEPSAAHRSMGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRL-GLPSYAD 1945

  Fly  1488 RSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTG 1552
            |.....:.|..|:|..|.|::|.|.::.:|....|:||:.:|.:.....::...|.|.:.|..:.
  Rat  1946 RPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVVREGRSVVLTSHSM 2010

  Fly  1553 LDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMS 1617
            .:.|.|..|..:::.|:...:.........:.:|:.|.:|..                    |..
  Rat  2011 EECEALCTRLAIMVNGRFRCLGSAQHLKSRFGAGHTLTLRVP--------------------PDQ 2055

  Fly  1618 PNKKFSAFMEIKFPDAVLTIERDDSMVFVLPL-GTTTFSEIFLTLRKDAFEMNIEDYFITRNMLV 1681
            |.... ||:...||||.|.......:.|.||. |..|.:.:|..|........:||:.:::..|.
  Rat  2056 PEPAI-AFIVTTFPDAELREVHGSRLRFQLPPGGGCTLARVFRELAAQGKAHGVEDFSVSQTTLE 2119

  Fly  1682 G-FQIFTYDQHQD 1693
            . |..|:.||.::
  Rat  2120 EVFLYFSKDQGEE 2132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 46/245 (19%)
CcmA 541..848 CDD:224054 95/362 (26%)
ABC_subfamily_A 541..761 CDD:213230 72/222 (32%)
ABC2_membrane_3 911..>1189 CDD:289468 68/448 (15%)
ABC2_membrane <1080..>1188 CDD:304374 30/122 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 54/209 (26%)
PRK14255 1371..1586 CDD:172743 54/217 (25%)
Abca7NP_997481.1 rim_protein 1..2127 CDD:130324 407/2021 (20%)
ABC2_membrane <557..742 CDD:304374 42/219 (19%)
ABC_subfamily_A 805..1024 CDD:213230 72/222 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1086 2/41 (5%)
ABC_subfamily_A 1818..2038 CDD:213230 56/241 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2129..2170 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342219
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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