Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038957107.1 | Gene: | Abca16 / 293444 | RGDID: | 1563534 | Length: | 1680 | Species: | Rattus norvegicus |
Alignment Length: | 1858 | Identity: | 442/1858 - (23%) |
---|---|---|---|
Similarity: | 762/1858 - (41%) | Gaps: | 383/1858 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLMN------WKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDRSWM 69
Fly 70 QMVEKLEKARQVADTYNVKGNPFTPHLV--------------IGWAPKRYGIFQAMMRRVQKQIE 120
Fly 121 PMTSV-GFEDCEEMRESVI----ENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNY---- 176
Fly 177 -TILLPSELRMLDGDFRMANWMT--LYNDDPNTFVLTRLNQPY-EGGFVGYVREGFIRLQKSVSE 237
Fly 238 SFLVLTSHKS---------LPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQV 293
Fly 294 VSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILI 358
Fly 359 LVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYAL-P 422
Fly 423 NVVATLVIEFLIERE-SIVHITW---------EDS---GYRLNYDGGHITVTASSWIFMLNALVY 474
Fly 475 CAIGLYVDMWRGGD------------RS---GK-KMKKPNTNASVQEDPYHERGDSFTHQGQAIG 523
Fly 524 VNSTKI------YEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKS 582
Fly 583 TLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHN 647
Fly 648 NI---EIDG-------QSNYF-LNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDV 701
Fly 702 HSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGH 766
Fly 767 GYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLG 831
Fly 832 VVSFRIRDTSMEEIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEANEKGRR---------- 886
Fly 887 ---------------TGWKLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMALVAVCTFSSIFI-- 934
Fly 935 ------------YGKN---YEL---EPLTFNLSQLHTVDAFVELFSEEEDVK----DMHAYYTEL 977
Fly 978 LYWYDAH----VATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYA 1038
Fly 1039 LNVVHNAVARHLFDEEATIDVTLAPLPF-RTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIY 1102
Fly 1103 MITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNHDVMLYGYISVT 1167
Fly 1168 L--MLGGFWVILLAYLMASLCRNPCYGFLWLCGIN------SIGLVCFSQFY-RTHPE--SMLLE 1221
Fly 1222 PTFMAM--YTVATVICKLFMIYEFKLICMDPVVNFTSV-----EVFKCNSIPNCCIKSNYGTFTA 1279
Fly 1280 GIYHDLVILTLLDIILLACLFVSE----------YHSILGFADCRL----------DTRTNESPD 1324
Fly 1325 SNQESR-AFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSE 1388
Fly 1389 CLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRE 1453
Fly 1454 LLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDG 1518
Fly 1519 VPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENY 1583
Fly 1584 KSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLP 1648
Fly 1649 LGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIF 1686 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 50/230 (22%) |
CcmA | 541..848 | CDD:224054 | 108/317 (34%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 79/230 (34%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 77/308 (25%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 40/109 (37%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 54/206 (26%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 53/214 (25%) | ||
Abca16 | XP_038957107.1 | rim_protein | <163..1664 | CDD:130324 | 409/1659 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342271 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.950 |