DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and Abca16

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_038957107.1 Gene:Abca16 / 293444 RGDID:1563534 Length:1680 Species:Rattus norvegicus


Alignment Length:1858 Identity:442/1858 - (23%)
Similarity:762/1858 - (41%) Gaps:383/1858 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLMN------WKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDRSWM 69
            ||:|      |||..|:....|..::.:|...||.::.::.|....:|                 
  Rat     4 LLLNQLTVLLWKNFTLKKRQVLSTVMEVLAALLFVIMLLIFRALTDMN----------------- 51

  Fly    70 QMVEKLEKARQVADTYNVKGNPFTPHLV--------------IGWAPKRYGIFQAMMRRVQKQIE 120
                       :|..|:     |||..:              :.:.|....:...::..|::.:.
  Rat    52 -----------IAGPYH-----FTPQPIATMPSFIKDAQEWELIYIPSEIDVVTEIIEDVKRNLN 100

  Fly   121 PMTSV-GFEDCEEMRESVI----ENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNY---- 176
            ....| ||....|..|.::    ...:.|.:.||..       |:..|......::..|.:    
  Rat   101 ITIKVRGFPSEVEFEEYILFDYTSQKVLAAIVFDCD-------FKNKTDPLPLQVKYHLRFVGAQ 158

  Fly   177 -TILLPSELRMLDGDFRMANWMT--LYNDDPNTFVLTRLNQPY-EGGFVGYVREGFIRLQKSVSE 237
             ||..|.::          .|.|  |:.:.|:   |...|..| :||..||::|||:.:|.:|.:
  Rat   159 RTIWWPDKI----------GWKTRLLFPNHPS---LKPRNPNYLDGGSPGYIKEGFLAVQHAVDK 210

  Fly   238 SFLVLTSHKS---------LPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQV 293
            |  ::..|:|         :.|: ::|||.....||.|:...:..:|.:.|:.|.......:..:
  Rat   211 S--IMLYHESRAGKELFENIDTL-VQRFPYPSHPQDKLLWISSPFIPLMFILMFSSIVLSIMRSI 272

  Fly   294 VSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILI 358
            |.||:.:::::.:.|.:.|.|.::.::.......:....:|..||.|:..:: .:|..:....:.
  Rat   273 VFEKEKRLKEYQLIMGLRNWIIWMGYFFTFFPLYVAIIFLICILLFIQIVEE-PILRYSDCSFIF 336

  Fly   359 LVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYAL-P 422
            :.|.||..|::.||.||:.||.....|.....:|:..|:.|...:| ...|.:.....::..| .
  Rat   337 VFLTCYAIASICFAFMVSTFFSKTRLAASAGNLLFFASFFPYNFIS-EYYGMLDLTTKITACLSA 400

  Fly   423 NVVATLVIEFLIERE-SIVHITW---------EDS---GYRLNYDGGHITVTASSWIFMLNALVY 474
            ||...|.|..||:.| ..:.:.|         ||:   ||.|.             :.:|:|.:|
  Rat   401 NVALALGINILIKLEIQEIGVKWDNLWTPANLEDNLNFGYMLG-------------MLLLDAFLY 452

  Fly   475 CAIGLYVDMWRGGD------------RS---GK-KMKKPNTNASVQEDPYHERGDSFTHQGQAIG 523
            ..:..||:....|.            ||   || |::|                         ||
  Rat   453 SLVTWYVEAVFPGQCGVPQPWYFFIMRSYWFGKPKIRK-------------------------IG 492

  Fly   524 VNSTKI------YEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKS 582
            ..:..|      ||.|||:....::||.|.|.|.|  :||:|..|.|:||.:||||:||||.||:
  Rat   493 EEAKSIPVVHNCYEAEPSNLEAGIQIKHLHKEFKT--KPAINNLSLNIYEGQVTVLLGHNGAGKT 555

  Fly   583 TLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHN 647
            |.|.:|.|....:||...|:.:||.........:||....||:|....|:.::|.|.|.:||...
  Rat   556 TTLSVLTGRFAATRGEAYINGYNISDNMAEIRKDLGFCPQHDLLFDDLTLSEHLFFYCMIKGHPQ 620

  Fly   648 NI---EIDG-------QSNYF-LNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDV 701
            ||   ||:.       |.||. |:....||::.|            :||..|.:|.|.::::|:.
  Rat   621 NINCVEINRMLSVFNLQENYHTLSGSVSGGVRRK------------LSIILALMGGSKVVILDEP 673

  Fly   702 HSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGH 766
            .|.:|..::...|:::...|..|||:|.::....|:.:.||:|||..|.|.|.|:..|||.:||.
  Rat   674 SSGMDPMSRRATWDILQHYKQNRTILLTTHYMDEADVLGDRIAIMVRGTLHCCGSSVFLKQIYGA 738

  Fly   767 GYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLG 831
            ||.:...|......|.:..|:..::|...:|.|||.:::|:|..|:..:|..|..:||...:.||
  Rat   739 GYHIVLEKEPYCDVDNIIAMIQQHVPGSMLENDIGNELSFILPKKYVSRFETLFTELEMRQKALG 803

  Fly   832 VVSFRIRDTSMEEIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEANEKGRR---------- 886
            :.:|....|:|||:||:.    |..:...:|.:.    ::.||.|..:..:..::          
  Rat   804 IANFGASITTMEEVFLKV----NKLAAPQRSIQT----IQPYYLTYKKMRQDEQQNVNILRNYNK 860

  Fly   887 ---------------TGWKLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMALVAVCTFSSIFI-- 934
                           ||..|:.....::..||.:...|:|.::..:::.:.:|......|:.:  
  Rat   861 PIFPYLREIATVKFNTGVPLYRQQFYSMFIKRALFIGRNWKLMFLQIIVVLVVTTYLLLSLHLDD 925

  Fly   935 ------------YGKN---YEL---EPLTFNLSQLHTVDAFVELFSEEEDVK----DMHAYYTEL 977
                        |||.   |.:   ..|..||  :..:..|::  |:.:.:|    ||:.|   :
  Rat   926 NDIPERELNLSHYGKTIVPYSISGNSDLALNL--IKNLKIFLK--SKNQSLKKIKGDMNNY---I 983

  Fly   978 LYWYDAH----VATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYA 1038
            |...|..    :|...|...|                         :.::|.:|||...||...:
  Rat   984 LENKDCRTFCIIALSIKVERN-------------------------KTVLTIFFNNEAYHSPAIS 1023

  Fly  1039 LNVVHNAVARHLFDEEATIDVTLAPLPF-RTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIY 1102
            |:::.|.:...|...:|:|.....|.|. ....||.|.:......||||||..|:    .:|:|.
  Rat  1024 LSILDNILFMTLSGRDASITAFNKPQPLPHYGSNTVPVNGLQIVQCLAFGISVVV----GSFSIQ 1084

  Fly  1103 MITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPNHDVMLYGYISVT 1167
            .:|||.|..|..|||.||.|.:||...:|.||:|....| ||::.:..:......|:.|.::...
  Rat  1085 TVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFAC-CVLLGIFRFCQLEAFVVHYNFLDTI 1148

  Fly  1168 L--MLGGFWVILLAYLMASLCRNPCYGFLWLCGIN------SIGLVCFSQFY-RTHPE--SMLLE 1221
            |  ||.|:.|:.|.||.:.|..:....::.:...|      ||.:....||| ...|.  .:|::
  Rat  1149 LIFMLYGWCVVPLTYLGSFLFNSSTAAYIKITLFNYFSTMFSIIIYTIVQFYGEDFPALIHILIK 1213

  Fly  1222 PTFMAM--YTVATVICKLFMIYEFKLICMDPVVNFTSV-----EVFKCNSIPNCCIKSNYGTFTA 1279
            ...||:  |.:|..|.|.|..||.|.:|   ...|.|:     |.|..|::        ||....
  Rat  1214 TILMALPSYNLAMSISKYFDDYEVKRLC---AREFRSIYMDCSEPFIQNNV--------YGFGEH 1267

  Fly  1280 GIYHDLVILTLLDIILLACLFVSE----------YHSILGFADCRL----------DTRTNESPD 1324
            ||...|:.|..:.::.|..|...|          :.::|.:...::          .|:.:|..|
  Rat  1268 GIGKFLITLATMGLVFLLLLLSLESVSSSLKNFVFRNVLFYFYNKIRKGRHGVHSKSTKEDEDED 1332

  Fly  1325 SNQESR-AFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSE 1388
            ..:|.| .|..:|......||       |||..:         |..|....:.::::...:.|||
  Rat  1333 IRKEKRKVFTLLLRLQNTPLV-------LNEVTK---------IYFKCPVVKAVKNISLVVRKSE 1381

  Fly  1389 CLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRE 1453
            |..:.|.|.:||||..|::..|..:.:|..:|...||..:..:....:|||||.:|:.:..|.||
  Rat  1382 CFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTKNPRKIRSRIGYCPQSESVLNHMTGRE 1446

  Fly  1454 LLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDG 1518
            .|.::|.|.|...:...|..||.|..|.|.|..::.:...:.|..|||..|.|::|...::.:|.
  Rat  1447 SLIMYARLWGVPEQDINEYVEAFLHSVHLEPIADQIIYTYSAGSKRRLSTAIALMGKSSVVFLDE 1511

  Fly  1519 VPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENY 1583
            ...|:||..:.::....:.:...|.:.:.|.....:.|.|..|..::::|:...:.......:.:
  Rat  1512 PSTGMDPVAQHLLWDTVTWVCKTGKAIIITSHRMEECEALCSRLAIMVKGKFTCLGTPQHVRKRF 1576

  Fly  1584 KSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLP 1648
            ...|.|.|:.      |::...           ...|:|..|::..||..:...|...::.:.:|
  Rat  1577 GQVYTLTVKI------NIAKDE-----------EKVKEFKDFIKSTFPGNIKFQEFHGTIGYYIP 1624

  Fly  1649 LGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIF 1686
            .....:.::|..|.:......:|||.:.:..|.  |||
  Rat  1625 STEICWGKVFEILEEAKVLFKLEDYSVKQVTLE--QIF 1660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 50/230 (22%)
CcmA 541..848 CDD:224054 108/317 (34%)
ABC_subfamily_A 541..761 CDD:213230 79/230 (34%)
ABC2_membrane_3 911..>1189 CDD:289468 77/308 (25%)
ABC2_membrane <1080..>1188 CDD:304374 40/109 (37%)
ABC_subfamily_A 1370..1577 CDD:213230 54/206 (26%)
PRK14255 1371..1586 CDD:172743 53/214 (25%)
Abca16XP_038957107.1 rim_protein <163..1664 CDD:130324 409/1659 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342271
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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