DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca15

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001099763.2 Gene:Abca15 / 293442 RGDID:1305981 Length:1668 Species:Rattus norvegicus


Alignment Length:1814 Identity:428/1814 - (23%)
Similarity:768/1814 - (42%) Gaps:282/1814 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKFLLMNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDPIDLDRSWMQMV 72
            :|.||:.|||..|:......|:..:::...|::|.:..|..:.:| :.::::.|.          
  Rat     7 KKLLLLLWKNFTLKRRKFGALVTEIILMLAFSIVLLTTRHLLSIN-KMESLHFPD---------- 60

  Fly    73 EKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIE-PMTSVGF---EDCEE- 132
               :....|...:.|..|...| ..:.:.|....:...::..|:|.:. ||..:||   .|.|: 
  Rat    61 ---QPVGAVPFFFRVSANSSRP-WELAYVPSNITVVHNIVENVKKDLNFPMAVIGFPSESDFEDY 121

  Fly   133 MRESVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMA--- 194
            .|.||....:.|.:           ||:.:...|...:...:.|.:......:.:.|   ||   
  Rat   122 ARSSVNSRNILAAI-----------VFDHNFANSRDPLPKKIKYNLRFSDIKKNIHG---MAYYQ 172

  Fly   195 --NWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLV------LTSHKSLPTI 251
              .|:|.:...|...|..|..|..:||..||:.|||:.:|.::.::.::      .|:..:..::
  Rat   173 GHTWLTKFLFPPLRIVGPRNPQEADGGSPGYITEGFLAVQHALDKAIMLHHGGAAATALFNDVSL 237

  Fly   252 QIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHF 316
            .|:|||......|......|..:|..:...|.....:.||.:|.||:::::::.:.:.:.|.:.:
  Rat   238 FIQRFPYPAYYHDHFYLFANTFVPLTVASIFFLNHLILVWSIVWEKENRLKEYQLMIGLRNWMFW 302

  Fly   317 VSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRN 381
            ::::........|:.:.:..:|.::.|.........|..:.||:|| |..:::.|:.|::..|..
  Rat   303 IAYFFTFFCLYFINIIFMCIVLFVKIDPAPIFQYNDPILVFILLLF-YAISSIFFSFMISTLFNR 366

  Fly   382 ALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALP-----------NVVATLVIEFLIE 435
            ...||.:.:.|:.::|:|...::.:.|   |        :|           ||.......||:.
  Rat   367 VSFAVSLGSFLFFLTYLPAITMNQSFE---H--------MPPRQKLIWSFDFNVGMAFGFRFLVN 420

  Fly   436 RESIVHITWEDSGYRLN-----YDGGHITVTASSWIFMLNALVYCAIGLYVD------------- 482
            .|:      ..:|.:.|     .|...:..|....:.:::|.:|..:..|::             
  Rat   421 AET------RKTGMKWNNIFLPTDSDSLLFTYVLGMLLVDAFIYGLVAWYIEAVFPGEYGVPKPW 479

  Fly   483 -------MWRGGDRSGKKMKKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRRFK 540
                   .|.|..|    .:||...      .:.:|.:|             |.:||||:.....
  Rat   480 NFFLMHSYWFGESR----QQKPEIT------QFCKRVES-------------KYFEVEPTDLTAG 521

  Fly   541 LKIKKLCKRFATND--RPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISS 603
            ::||.|.|.|..|:  :.|:|..|.||||.::|||:||||.||||.|.||:||..|:.|...:..
  Rat   522 IQIKHLHKVFQENNITKVAINDLSLNVYEGQITVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHG 586

  Fly   604 HNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQI---- 664
            .:|..........||:....::|....||.::|.|.|||||:..|:.:: ::|..|:...:    
  Rat   587 EDISQHMDQIRNFLGLCPQQNLLFDHLTVSEHLYFYCRVKGVPQNMCLE-ETNNMLSAFNLTEKR 650

  Fly   665 --------GGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEK 721
                    ||:|.|            ::|..|.:|.|.::::|:..|.:|..::...|:::...|
  Rat   651 DAFSKSLSGGMKRK------------LAIIIALIGGSKVVILDEPTSGMDPASRRSTWDVVQTYK 703

  Fly   722 SKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGM 786
            ..|||:|.::....|:.:.||:|||..|.|:|.|:..|||.:||.|..:..||......||:..:
  Rat   704 QNRTILLTTHYMDEADMLGDRIAIMVQGTLRCCGSSVFLKRLYGVGSHIVMVKEPVCDVDEISKL 768

  Fly   787 MNSYMPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFG- 850
            ::.|:|..:::.::|.:::|:|..::..:|..|:..||||.:.||:.||.:..|:|||:|||.. 
  Rat   769 IHYYIPTATLKTNVGNELSFILPKEYTHKFEALLTALEENQENLGISSFGMSITTMEEVFLRVSK 833

  Fly   851 CEDN--------DQSGAFQSHENAQV--LLEEYYSTLAEANEKGRRTGWKLFFLHGRAVIYKRWI 905
            .||:        ..|...:.:.|..|  .:...:.|.:|.......||..|:.....|:..||.:
  Rat   834 MEDSKPDMEATQSPSAGSKGNRNRDVESSMRAGFPTQSEDQTIVFNTGCPLYLQQFHAMFMKRLM 898

  Fly   906 AAHRHWIVLIFEVLAMALVAVCTFSSIFIYGKNYELEPLTFNLSQLHTVDAFVELFSEEEDVKDM 970
            ...|:|.||..::|.:.:       |.|:..|::|..........|......:..||    :...
  Rat   899 YNWRNWRVLSVQILGLVI-------STFLLLKSHEFRHKRIRQMNLDDYGQTIVPFS----ILGK 952

  Fly   971 HAYYTELLYWYDAHVATLTK-NRH-------NAYALLTQNQFTAH--VNSRYIFGATFDQKIVTA 1025
            ....|.||    .|:..:.| ..|       :....|..|:...|  :.:..|..|....|: |.
  Rat   953 SNLTTSLL----IHLENMLKPGNHQLKEVQGDLLKYLEGNEECIHLCIVALSIKVAAGRAKL-TV 1012

  Fly  1026 WFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICF 1090
            .|||...||...:|.|:.|.:...|....|:|.|...|.| |.....:|.|  |:|..:||.|..
  Rat  1013 LFNNEAYHSPSLSLAVLDNILFMSLSGANASITVFHKPQP-RPTSKEWPRS--TYGKIVAFKIQL 1074

  Fly  1091 VLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCACVVVMVALYENPN 1155
            .:..:...|.|..:|||.:..|..|||:|..|..||...:::|.:...|.|..::||...|:   
  Rat  1075 GMALLVSGFCILTVTERITKAKHMQFLSGASVLVYWLSALVFDFIIFFISCCFLLVMFKYYK--- 1136

  Fly  1156 HDVMLYGY----ISVTLMLGGFWVILLAYLMASLCRN--PCY----GFLWLCGINSI-------- 1202
            .|:.:..|    ..:.|:|.|:..|.|.|||:.|...  |.|    .|.:|.|.:.:        
  Rat  1137 IDIYVTDYHILETMLILILFGWSAIPLTYLMSFLFSKSIPAYIQLLVFYYLSGTSGLLIDTIIEA 1201

  Fly  1203 GL-VCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYEFKLICMDP--VVNFTSVEVFKCNS 1264
            || ...|...:|...|.||   |...|.:...|.:..:||:.|::|:..  |:.:.         
  Rat  1202 GLSTIISNSTQTFLLSSLL---FFPTYNLGKCISEYTVIYQRKILCIQQKNVLKYL--------- 1254

  Fly  1265 IPNCC---IKSN-YGTFTAGIYHDLVILTLLDIILLACLFVSE---------YHSILGFADC--- 1313
              ||.   .|.| |......|...|:.:::...:.|..:|..|         .|..:.|..|   
  Rat  1255 --NCSKEYTKKNIYSLKKPMIGKYLIAMSIAGFVYLLFIFFWENISWKLRMLIHQHIYFGVCKKY 1317

  Fly  1314 RLDTRTNESPDSNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSK-YRRNRVL 1377
            :.|..:||...::::         ||    |:.|....|.:.|:.....|.|..::| |.::.::
  Rat  1318 KSDIISNELSGTSED---------ND----VENERREILYQPEKFLNCPVLIKQLTKIYFKSPLI 1369

  Fly  1378 ---RDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYC 1439
               :::...:.:.||..:.|.|.:||||..:::..|....||.::|...|:....::....:|||
  Rat  1370 LAVKNISLAIQERECFGLLGFNGAGKTTTFQILTGEITPTAGDVFIDGISITKDVLKVRSKIGYC 1434

  Fly  1440 PQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFA 1504
            ||.|:|....|..|::.::|.:.|...|..|......|..:.|.|..|..:...:.|..|||..|
  Rat  1435 PQFDALLEYLTGWEIMVMYARIWGISERQIRPYVNTYLNSLELEPHANSLISTYSEGNKRRLSTA 1499

  Fly  1505 YAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQ 1569
            .|::|.|.:|.:|....|:||..:|::......::..|.:.:.|..:..:.|.|..|..:::.|:
  Rat  1500 IAMMGKPSVIFLDEPSTGMDPRARRLLWDAVIKIRESGKAIIITSHSMEECEALCTRLSIMVHGK 1564

  Fly  1570 LWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAV 1634
            |..:.........:...|.|    |.||....::                |:|..|:.:.||.:.
  Rat  1565 LTCLGSPQYLKNKFGDIYIL----KTKVKSGETL----------------KEFKNFITLTFPGSE 1609

  Fly  1635 LTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIFTYDQHQD 1693
            |..|....:.:.:|....::.::|..|.|...:.::|||.|::..|  .|:|.....||
  Rat  1610 LKQENQGILNYYIPSKDNSWGKVFGILEKAKEQYDLEDYSISQITL--DQVFLAFADQD 1666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 41/232 (18%)
CcmA 541..848 CDD:224054 104/320 (33%)
ABC_subfamily_A 541..761 CDD:213230 75/233 (32%)
ABC2_membrane_3 911..>1189 CDD:289468 76/293 (26%)
ABC2_membrane <1080..>1188 CDD:304374 34/111 (31%)
ABC_subfamily_A 1370..1577 CDD:213230 53/210 (25%)
PRK14255 1371..1586 CDD:172743 52/217 (24%)
Abca15NP_001099763.2 ABC2_membrane_3 <255..464 CDD:289468 40/226 (18%)
CcmA 522..834 CDD:224054 106/324 (33%)
ABC_subfamily_A 522..743 CDD:213230 75/233 (32%)
ABC2_membrane_3 <1007..1195 CDD:289468 59/194 (30%)
ABC_subfamily_A 1354..1575 CDD:213230 55/220 (25%)
drrA 1369..1662 CDD:130256 74/314 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342266
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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