Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948786.1 | Gene: | Abca13 / 289797 | RGDID: | 1305895 | Length: | 5037 | Species: | Rattus norvegicus |
Alignment Length: | 1850 | Identity: | 402/1850 - (21%) |
---|---|---|---|
Similarity: | 714/1850 - (38%) | Gaps: | 410/1850 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 IDLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQ-----AMMRRVQKQIEP 121
Fly 122 MTSVGFEDCEEMRESVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRM 186
Fly 187 LDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVL-TSHKSL-P 249
Fly 250 TIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLI 314
Fly 315 HFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFF 379
Fly 380 RNALNAVRVLTILWIMSYVP---TFILSNNLEGNIHALRYVSYALPNVVATL----------VIE 431
Fly 432 FLIERESIVHITWEDSGYRLNYDGGHITVTASSWIFMLNALVYCAIGLYV-DMWRGGDRSGKKMK 495
Fly 496 KP--------------------------------NTNASVQEDPYHERGDSFTHQGQAIGVNSTK 528
Fly 529 IYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVE 593
Fly 594 PSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKG-LHNNIEIDGQSNY 657
Fly 658 FLNVLQI------------GGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQ 710
Fly 711 SLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKG 775
Fly 776 KNYKRDE-------LFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQ--FPMLIDDLEENMQQLG 831
Fly 832 VVSFRIRDTSMEEIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEANEKG-----------R 885
Fly 886 RT----------GWKLFFLHGRAVIYKRWIAAHRHW--------IVLIFEVLAMALVAV----CT 928
Fly 929 FSSIFIYGKNYELEPLTFNLSQLHTVD---AFVELFSEEEDVKDMHAYYTELLYWY--------- 981
Fly 982 -DAHVATLTKNRHNAYALLTQ------NQFTAHVNSRYI-------------FGATF-----DQK 1021
Fly 1022 IVTA--------WFNNIPLHSAPYALNVVHNAVARHLFDEEAT----IDVTLAPLPFRTAINTFP 1074
Fly 1075 PSSHTFGGCL-------------AFGICFVLTF--IWPAFAIYMITERGSLLKKQQFLAGVRVCS 1124
Fly 1125 YWTFTVLYDLLFLLI-FCACVVVMVALY-------ENPNHDVMLYGYISVTLMLGGFWVILLAYL 1181
Fly 1182 MASLCRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLE--PTFMAMYTVATVICKLFMIYE-- 1242
Fly 1243 ---FKLICM--------------DPVVNF---TSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVI 1287
Fly 1288 ----LTLLDIILLA-CLFVSEYHSILGFADCRLDTRTNESPDSNQESRAFPGILSNDTAALVDKE 1347
Fly 1348 HTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETK 1412
Fly 1413 MNAGQLWIHDYS------VNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRE 1471
Fly 1472 LSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTS 1536
Fly 1537 TMQAM-GSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPN 1600
Fly 1601 VSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDA 1665
Fly 1666 FEMNIEDYFITRNMLVGFQIFTYDQHQDNP 1695 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 53/229 (23%) |
CcmA | 541..848 | CDD:224054 | 87/328 (27%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 61/232 (26%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 73/361 (20%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 32/130 (25%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 53/213 (25%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 53/221 (24%) | ||
Abca13 | XP_038948786.1 | rim_protein | 1..>82 | CDD:130324 | |
rim_protein | 3042..5029 | CDD:130324 | 401/1849 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342292 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |