DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and Abca7

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001334010.1 Gene:Abca7 / 27403 MGIID:1351646 Length:2167 Species:Mus musculus


Alignment Length:2023 Identity:423/2023 - (20%)
Similarity:759/2023 - (37%) Gaps:526/2023 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SYIRKFLL-MNWKNHKLQLANPLELLVILLVPPLF------TLVAVLMRFFIPVNHRSDTVYDPI 62
            ::.||.:. :|....:|.|...|..|..:|.|.:|      |.||:|.| .:.|.........| 
Mouse   299 NFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMNDSTNVAMLQR-LLDVGGTGQRQQTP- 361

  Fly    63 DLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIEPMTSVGF 127
                   :..:|||..:...|......:....|..:|   :..||...||..|  .::.:.:|..
Mouse   362 -------RAQKKLEAIKDFLDPSRGGYSWREAHADMG---RLAGILGQMMECV--SLDKLEAVPS 414

  Fly   128 EDCEEMR--ESVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSEL---RML 187
            |:....|  |.:.|..|:||:.|         :..|..|:               ||||   .:.
Mouse   415 EEALVSRALELLGERRLWAGIVF---------LSPEHPLD---------------PSELSSPALS 455

  Fly   188 DGDFRMANWMTLYNDDPNTFVLTRLNQ---------PYEGGFVG--YVREGFIRLQKSVSESFL- 240
            .|..|....|.:  ||     :||.|:         |....|:.  ||..||:.||..:.::.: 
Mouse   456 PGHLRFKIRMDI--DD-----VTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVR 513

  Fly   241 VLTSHKSLPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFL 305
            ||....|...:.:::.|......|..:..|:..:|..:.:.:::...|.|..||.||::::|:.:
Mouse   514 VLGGGNSRTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETM 578

  Fly   306 INMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVA 370
            ..|.:...:.::.|:|..|...::|:.::..:||:     ..:|..:...::.|.|..:..|.||
Mouse   579 RAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKL-----GNILPYSHPVVIFLFLAAFAVATVA 638

  Fly   371 FAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIE 435
            .:.:::|||..|..|.....:.:...|:| ::|.......:|....::.:|.:.||     |...
Mouse   639 QSFLLSAFFSRANLAAACGGLAYFALYLP-YVLCVAWRERLHLGGLLAASLLSPVA-----FGFG 697

  Fly   436 RESIVHITWEDSGYRLNYDGGH------------ITVTASSWIFMLNALVYCAIGLYVDM----- 483
            .||:..:  |:.|     ||..            .::...|...:|:|::|.....|::.     
Mouse   698 CESLALL--EEQG-----DGAQWHNLGTGPAEDVFSLAQVSAFLLLDAVIYGLALWYLEAVCPGQ 755

  Fly   484 ------W----RGGDRSGKKMKKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYEVEPSHRR 538
                  |    |.....|....|.:..|...:||                    |:...||....
Mouse   756 YGIPEPWNFPFRRSYWCGPGPPKSSVLAPAPQDP--------------------KVLVEEPPLGL 800

  Fly   539 FK-LKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMIS 602
            .. :.|:.|.|.|....:|||...:.:.||..:|..:||||.||:|.|.||:||..||.|:..|.
Mouse   801 VPGVSIRGLKKHFRGCPQPALQGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASIL 865

  Fly   603 SHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLHN----------------NIEI 651
            .|::||...|....|||...:::|....||.:::.|..|:||:..                .::.
Mouse   866 GHDVQTNMAAIRPHLGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAMGPERERLIRDVGLTLKR 930

  Fly   652 DGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNL 716
            |.|:.:.     .||::.|            :|:..||||.|.::::|:..:.:|..::..:|.|
Mouse   931 DTQTRHL-----SGGMQRK------------LSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWEL 978

  Fly   717 INEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKG------ 775
            :.:.:..||:||.::....||.:.||:|:::.|.|.|.|:..||:...|.||.||.||.      
Mouse   979 LLKYREGRTLILSTHHLDEAELLGDRVAMVAGGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVT 1043

  Fly   776 -----------KNYKRD----------------------------------ELFGMMNSYMPNMS 795
                       :..|.|                                  .:..::..::|...
Mouse  1044 HDAKGDSEDPRREKKSDGNGRTSDTAFTRGTSDKSNQAPAPGAVPITPSTARILELVQQHVPGAQ 1108

  Fly   796 IERDIGYKVTFVL--ENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFLRFGCEDNDQSG 858
            :..|:.:::..||  ....:..|.|:..:|::.::.||:..:.|.||::|||||:. .||..:.|
Mouse  1109 LVEDLPHELLLVLPYAGALDGSFAMVFQELDQQLELLGLTGYGISDTNLEEIFLKV-VEDAHREG 1172

  Fly   859 -----------------------AFQSHENAQVLLEEYYSTLAEANEKGRRTGWKLFFLHGRAVI 900
                                   ..::.|.|:::|:. .:....|....:..||.|.....||::
Mouse  1173 GDSRPQLHLRTCTPQPPTGPEASVLENGELAKLVLDP-QAPQGLAPNAAQVQGWTLTCQQLRALL 1236

  Fly   901 YKRWIAAHRHWIVLIFEVLAMAL-VAVCTFSSIFI--YGK--NYELEPLTF-------------N 947
            :||::.|.|....|..:|:..|| |.:..|.|:.:  :|:  ..:|.|..:             :
Mouse  1237 HKRFLLARRSRRGLFAQVVLPALFVGLALFFSLIVPPFGQYPPLQLSPAMYGPQVSFFSEDAPGD 1301

  Fly   948 LSQLHTVDAFV-ELFSEEEDVKDMHA-----------YYT------------------------- 975
            .:::..::|.: |...:|..::|..|           |:|                         
Mouse  1302 PNRMKLLEALLGEAGLQEPSMQDKDARGSECTHSLACYFTVPEVPPDVASILASGNWTPESPSPA 1366

  Fly   976 ---------ELL--------------------------------------------------YWY 981
                     .||                                                  .|.
Mouse  1367 CQCSQPGARRLLPDCPAGAGGPPPPQAVAGLGEVVQNLTGRNVSDFLVKTYPSLVRRGLKTKKWV 1431

  Fly   982 D------------------AH--VATLTKNRHNAYALLTQ---NQFTAHVNSRYIFGATFD-QKI 1022
            |                  .|  |.||.:.|    |||:.   |.....:|:...:....| :..
Mouse  1432 DEVRYGGFSLGGRDPDLPTGHEVVRTLAEIR----ALLSPQPGNALDRILNNLTQWALGLDARNS 1492

  Fly  1023 VTAWFNNIPLHSAPYALNVVHNAVARHLFDE------------EATIDVTLAPLPFRTAINTFPP 1075
            :..||||...|:....:|..:|.:...|...            ...:::|...|...|.|     
Mouse  1493 LKIWFNNKGWHAMVAFVNRANNGLLHALLPSGPVRHAHSITTLNHPLNLTKEQLSEATLI----- 1552

  Fly  1076 SSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIF 1140
             :.:....::..:.|.::|:..:|.:.:|.||.:..|..|.::|:....||....|:|:...|: 
Mouse  1553 -ASSVDVLVSICVVFAMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWLGNFLWDMCNYLV- 1615

  Fly  1141 CACVVVMVAL------YENPNH------DVMLYGYISVTLMLGG---FWVILLAYLMASLCRNPC 1190
            ..|:||.:.|      |..|.:      .::|||:....||...   |.|...||::.: |.|  
Mouse  1616 AVCIVVFIFLAFQQRAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLT-CIN-- 1677

  Fly  1191 YGFLWLCGINSIGLVCFSQFYRTHPESMLLEPTFMA-------MYTVATVICKLFMIYEFKLICM 1248
               |:: ||||               ||   .||:.       :..|:.::.::|:|  |...|:
Mouse  1678 ---LFI-GINS---------------SM---ATFVLELLSDQNLQEVSRILKQVFLI--FPHFCL 1718

  Fly  1249 -----DPVVNFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLL------DIILLACLFVS 1302
                 |.|.|....:.|:         :.....|.:.:..|::...||      .:.||..|.:.
Mouse  1719 GRGLIDMVRNQAMADAFE---------RLGDKQFQSPLRWDIIGKNLLAMMAQGPLFLLITLLLQ 1774

  Fly  1303 EYHSILGFADCRLDTRTNESPD--SNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGI 1365
            ..:.:|..:..||.....|..:  :.:..|...|....|...|.|                    
Mouse  1775 HRNRLLPQSKPRLLPPLGEEDEDVAQERERVTKGATQGDVLVLRD-------------------- 1819

  Fly  1366 GIVSKYR--RNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTH 1428
             :...||  ||..:..|...:...||..:.|.|.:|||:..::|..:|..::|:..:..::|...
Mouse  1820 -LTKVYRGQRNPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNVAQE 1883

  Fly  1429 RVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG-HRHRIGRELSEALLRLVGLTPCWNRSVRM 1492
            |...:|.:|||||.|::....|.||.|.:.|.|:| ...::.:.....|:|| ||....:|....
Mouse  1884 RSAAHRSMGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRL-GLPSYADRPAGT 1947

  Fly  1493 CTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAER 1557
            .:.|..|:|..|.|::|.|.::.:|....|:||:.:|.:.....::...|.|.:.|..:..:.|.
Mouse  1948 YSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREGRSVVLTSHSMEECEA 2012

  Fly  1558 LSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKF 1622
            |..|..:::.|:...:.........:.:|:.|.:|..                    |..|....
Mouse  2013 LCTRLAIMVNGRFRCLGSSQHLKGRFGAGHTLTLRVP--------------------PDQPEPAI 2057

  Fly  1623 SAFMEIKFPDAVLTIERDDSMVFVLPL-GTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVG-FQI 1685
             ||:.|.||.|.|.......:.|.||. |..|.:.:|..|........:||:.:::..|.. |..
Mouse  2058 -AFIRITFPGAELREVHGSRLRFQLPPGGRCTLTRVFRELAAQGRAHGVEDFSVSQTTLEEVFLY 2121

  Fly  1686 FTYDQHQD 1693
            |:.||.::
Mouse  2122 FSKDQGEE 2129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 46/228 (20%)
CcmA 541..848 CDD:224054 95/375 (25%)
ABC_subfamily_A 541..761 CDD:213230 69/235 (29%)
ABC2_membrane_3 911..>1189 CDD:289468 74/442 (17%)
ABC2_membrane <1080..>1188 CDD:304374 30/122 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 56/209 (27%)
PRK14255 1371..1586 CDD:172743 56/217 (26%)
Abca7NP_001334010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1042..1088 2/45 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1172..1192 1/19 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2126..2167 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838429
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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