DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abt-1

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001293854.1 Gene:abt-1 / 182849 WormBaseID:WBGene00000019 Length:1558 Species:Caenorhabditis elegans


Alignment Length:1753 Identity:334/1753 - (19%)
Similarity:621/1753 - (35%) Gaps:460/1753 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VLMRFFIP---VNHRSDTVYDPI---DLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWA 101
            |.|...||   |::|..||.|.|   .||...::..:|||||:...:...|      ..||    
 Worm    78 VKMIVCIPETVVDYRFSTVIDAIHLTHLDYPHLEFTKKLEKAKNKLEDGEV------DFLV---- 132

  Fly   102 PKRYGIFQAMMRRVQKQIEPMTSVGFEDCEEMRESVIENGLFAGLCFDGSPFVEDQVFEEDTLES 166
                 :|:.:: ...|:||             .:.:.|.|:|...|      ::..|..:.|..:
 Worm   133 -----LFKTLI-ETGKKIE-------------YKIISEQGVFDKHC------IQCDVHRKKTWGN 172

  Fly   167 YSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRL 231
            ....|.::|..:....:.|..:.  |..:|..     .|.:|....|.|.           |::.
 Worm   173 AVEAQVVVNRFLYWLVKSRGFNK--RSPHWQL-----SNVYVKHSGNDPM-----------FLKR 219

  Fly   232 QKSVSESFLVLTSHKSLPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSE 296
            |   |:.||          :.|...||..|..|                         :|.  ::
 Worm   220 Q---SDLFL----------LWILLLPICSRLID-------------------------LWN--ND 244

  Fly   297 KQSQVRQFLINMNIGNLIHFVS----WY----LKGLIYEMISSLIIAALLKIRWDQDHGVLTQTP 353
            :.|......::::.....:|::    ||    :..||..:::.|::.|           |...| 
 Worm   245 RSSGYYNMFLSLHARRFHYFIAKFVFWYGIALIISLIVFIVNVLVVPA-----------VFCST- 297

  Fly   354 WYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSNNLEGNI-HALRYV 417
             |:..:|  ||....::|||.:|..|..:....:::..|.:::....|       |.: |.:.:.
 Worm   298 -YLQFVV--CYAACIISFAIFLATTFPGSPLFAKIVGFLSMVAGEFGF-------GTVYHGIGFF 352

  Fly   418 SYALPNVVATLVIEFLIERESIVHITWEDSGYRLNYDGGHI-TVTASSW------IFMLNALVYC 475
            ...:.:.           .:|.....|.|:...|...|..: .:|.|.:      :|.:..|.: 
 Worm   353 QLCVRHF-----------GKSEFDGPWIDAVCTLCMTGNCVLLITVSIYFDTYFCLFTMEPLAF- 405

  Fly   476 AIGLYVDMWRGGDRSGKK---------MKKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYE 531
            ...|..|.|....||.:.         :.||..:....:..:.|...:.|..|... :..|.|.:
 Worm   406 YFPLEKDYWMPEARSPQLDTFFVKQIILLKPGRSEITVKKAHDEILPAKTSTGSKY-IPPTPIVK 469

  Fly   532 VEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSR 596
            ..|     .:.:..:|||...:.|  :...|..|:..||..|.||:|||...:|.|:||.::|..
 Worm   470 GVP-----LVVLYGICKRIENHWR--VKQVSLTVHLGEVVTLYGHHGCGSGEILSIIAGQMKPEY 527

  Fly   597 GTVMISSHNIQTERKAASMELGIAFGHDMLLTGF-TVIDYLRFICRVKGLH-NNIEIDGQSNYFL 659
            |.||:.    |::|     .|.|:...|:....: .||.|||.|.:::|:. :...||    ..|
 Worm   528 GEVMME----QSQR-----PLMISKTTDVPNVNYLNVIQYLRLISKMRGVSASTSHID----EML 579

  Fly   660 NVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKR 724
            ..|.:..:|.:.:..|:......:.|...|||...::|||....:.....:.:|:..|.:.|.||
 Worm   580 EELDLIKVKNRSLDLLSTTQKERLRIAAVFVGQPDLVLIDFPTMECLPEWKFMVFRFIEKRKEKR 644

  Fly   725 TIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNS 789
            :||:.|..|...|.|:|::.:||.|.:...|:....|:.....:.:.......:..:::.|||.:
 Worm   645 SIIVSSYDPEETEAISDKVVLMSEGYVVLNGSCEAFKHSINSVFEIRIWPNNRFTDEQIKGMMKT 709

  Fly   790 Y-MPNMSIERDIGY------KVTFVLENKFEDQFPMLIDDLEENMQQLGVVSFRIRDTSMEEIFL 847
            . :.:..::.|..:      |:...|...:....|:::.:|:...::..:..:.:...::.:|:.
 Worm   710 LTLGDNQMKNDARFFETPNGKIRVTLPILYRRSIPLILRELDAVHEKFRIEFYELGKPNIHDIYA 774

  Fly   848 RFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEANEKGRRTGWKLFFLHGRAVIYK--RWI---AA 907
            . .|.::.|.....:.:.    |.::|:.....|:       |.:|......|:|  |::   ||
 Worm   775 N-ACYEHQQLDPLSTFDQ----LRDHYTKQQPLNK-------KTYFFKNMIHIFKDGRFLIETAA 827

  Fly   908 HRHWIVLIFEVLAMAL----------------VAVCTFSS-IFIYGKNYE---LEPLTF----NL 948
                :|.:|.:|.:.:                :::.::.| |.||....|   :|.:||    .:
 Worm   828 ----VVGLFLILTVIILLSYHSVESDSHQTREISLTSYESPITIYCDECEKEVIEGVTFEKKSRV 888

  Fly   949 SQLHTVDAFVELFSEEEDVKDMHAYYTELLYWYD---AHVATLTKNRHNA-YALLTQN------- 1002
            .||....|                    :|||.|   |....:|.:|.:| :.::.||       
 Worm   889 LQLENNQA--------------------VLYWKDTAKADKELITVSRGDALFTMIVQNFAVSQMI 933

  Fly  1003 --------QFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSA------PYALNVVHNAVARHLFDE 1053
                    |....:.|..:..||......|. ||:|....|      .|:|..:.......::  
 Worm   934 SKITGKHPQIKLFLESENVRTATEISGFSTV-FNDISSSKAAMILTESYSLMYITAVFQMFVY-- 995

  Fly  1054 EATIDVTLAPLPFRTAINTFPPSSH--TFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQF 1116
              |..|.   ||.|.......|.|.  .:...:.||..:|...:  .|.:..|....::|....|
 Worm   996 --TFSVV---LPLRLVSTNMGPQSMILPWPRYVYFGFIYVFQLV--VFLVIAIILGFAVLSMGFF 1053

  Fly  1117 LAGVRVC-----SYW------TFTVLYDLLF-----------LLIFCACVVV---MVALYENPNH 1156
            ......|     |.|      |..::|.|:|           :|...:..|.   :||.:...|.
 Worm  1054 ATNTTSCYLRFLSAWFLSYASTLPLIYFLVFNIQNTKSVIPIILAISSLSVTFPNLVASFSAENQ 1118

  Fly  1157 DVM--LYGYISVTLMLG--GFWVILLAYLMA--SLCRNPCYGFLWLCG-INSIGLVCFSQFYRTH 1214
            ..:  |..::|.:.||.  ....:|.|:|.|  ||.:|        .| |.|:.|.|.:||:   
 Worm  1119 VSLQSLIQFVSWSCMLNPPSSLQVLAAFLNAGESLEKN--------SGTITSLILFCGAQFW--- 1172

  Fly  1215 PESMLLEPTFMAMYTVATVICKLFMIYEFKLICMDPVVNFTSVEVFKCNSI------------PN 1267
                                    :|..|.|:...|..::.....||.:::            |.
 Worm  1173 ------------------------IIVIFVLVIFQPGFSYIQQYWFKSSTVLYSSFERGTTLKPG 1213

  Fly  1268 CCIKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFADCRLDTRTNESPDSNQESRAF 1332
            ..||::|                        :||:   :.||..:             :.:.:..
 Worm  1214 ARIKNSY------------------------IFVT---NPLGTME-------------DAQDKGA 1238

  Fly  1333 PGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANN 1397
            .|.:.|..||..:.......:....|..:...:..::.|..|.|          .:..::|..|:
 Worm  1239 SGNIPNRPAAGTEPVQKPTSDYIAGSSMSIDDMSYITNYEENLV----------EKMATMTSWND 1293

  Fly  1398 ------SGKTTLLKVVVNETKMNAGQL-WIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELL 1455
                  ....|.|  :.::||:.:..| .|...:.|.|       :.:.|..:::.:.:||.|||
 Worm  1294 KQEVPVDNSATFL--MGDQTKLKSALLTTIAKINKNEH-------IAFVPIVENISTIYTPFELL 1349

  Fly  1456 YIHAMLQG------HRHRI--GRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPD 1512
            ...|...|      |...:  ..:|.|.....:.|.||.:|.:.|         ..|..|: .|:
 Worm  1350 ENAAYCNGFEITDDHISYLLDAFDLKEHANTQIKLLPCIDRRILM---------LLAKLVI-KPN 1404

  Fly  1513 LICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMD 1577
            ::.:|.:...|..:....:....:.::..|...:||......||..:.....:.:||  .:|.:.
 Worm  1405 IVIIDQLEMFLPHSKMMTVWSFCARLRKNGLGIIYTSHHSGFAEHTATCCAHMYKGQ--FVRNLL 1467

  Fly  1578 TETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPM-SPNKKFSAFMEIKFPDAVLTIER 1639
            ..:...|... |||..|...:|.|.:......:.....: |.::..:..|   :.|.|.|||:
 Worm  1468 PTSIKAKCTV-LEVVPKTASDPKVLLHMLQKEMEESVKLPSTSRNITLAM---YKDGVETIEK 1526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 34/232 (15%)
CcmA 541..848 CDD:224054 73/315 (23%)
ABC_subfamily_A 541..761 CDD:213230 63/221 (29%)
ABC2_membrane_3 911..>1189 CDD:289468 71/359 (20%)
ABC2_membrane <1080..>1188 CDD:304374 29/138 (21%)
ABC_subfamily_A 1370..1577 CDD:213230 42/221 (19%)
PRK14255 1371..1586 CDD:172743 43/229 (19%)
abt-1NP_001293854.1 rim_protein <256..>676 CDD:130324 106/474 (22%)
P-loop_NTPase 474..677 CDD:393306 63/217 (29%)
ABC2_membrane_3 <917..1176 CDD:378925 59/303 (19%)
CcmA <1328..1491 CDD:224054 36/182 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S12404
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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