DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abt-5

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001364572.1 Gene:abt-5 / 173081 WormBaseID:WBGene00000023 Length:1582 Species:Caenorhabditis elegans


Alignment Length:1574 Identity:355/1574 - (22%)
Similarity:637/1574 - (40%) Gaps:283/1574 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 SVSESFLVLTSHKSLPTIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQ 298
            |:.|:|            .|:.:.||..|:...  ..|:|:.|.:.:  |.|.......:|.|| 
 Worm   175 SIIENF------------DIKLYSITNFEESGF--GQNFGLLFAVCM--LMPVISVARALVVEK- 222

  Fly   299 SQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFC 363
            |.|:.:|..:.:...:.::..:|.|:|.......:::.|.....|       ..|.|:| ..:|.
 Worm   223 SSVKPYLTTIGLPLWMFYLEHFLFGVIKNTFLITLLSTLYIFSMD-------NCPTYVL-AGIFM 279

  Fly   364 YNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFILSN--NLEGNIHALRYVSYALPNVVA 426
            |.|..|:|:|:..:........|..:.|:||     |.|::.  :||.....|.:|....||...
 Worm   280 YTCHCVSFSILCTSILPFGKRIVEGMVIIWI-----TLIIAMHLSLEFEFDWLFWVPLLNPNYSL 339

  Fly   427 TLVIE--FLIE--RESIVHITWEDSGYRLNYDGGHITVTASSWIFMLNALV-----YCAIG--LY 480
            .|.::  ||..  ..:.....:......|.....:..:..|..:.||.|.:     |..:|  ::
 Worm   340 KLFVDATFLASGPNGTPTSALFSSKKKTLQSAAVYFGIMISCTVVMLVAAIFMEKLYTFVGHAIF 404

  Fly   481 VDMWR-GGDRSGKKMKKPNTNASVQEDPYHERGDSFTHQGQAIGVNST------KIYEVEPSHRR 538
            ...|| .|...||:.|            ..||||....:...:....|      .|.::|     
 Worm   405 KRFWRILGFSKGKRSK------------IEERGDGVEDRSTILQCKETVEGRGSAIADIE----- 452

  Fly   539 FKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISS 603
                :..|.|.: .|...|:|..|......:|::|:|||||||||...::.|:.:.:.|.|||..
 Worm   453 ----LSGLVKVY-QNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVMIGG 512

  Fly   604 HNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKG-------------LHNNIEIDGQS 655
            .:....|..|...:|....::.:....||.::||.:..:||             |...||:..:.
 Worm   513 IDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIELTDKR 577

  Fly   656 NYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEE 720
            |.....|. ||:|         |.||   :|.|.:|.|.:||:|:..:.:|...:..|.|::...
 Worm   578 NTLAKNLS-GGMK---------RKLC---VCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALV 629

  Fly   721 KSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCV---------KGK 776
            |:.|||:|.::....||.:.|.:.:||:|::..:|:|.:||..||.|..||.|         ..|
 Worm   630 KADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLVFKSVHDPMRPRK 694

  Fly   777 NYK---------------RDELFGMMNSYMPNMSI---ERDIGYKVTFVLENKFED-----QFPM 818
            :|:               :||     ...|..:||   |:.....:..:||:..|:     :|..
 Worm   695 SYETAYDVCKTVCSTALVKDE-----RGQMIEISILETEKSRLPTLLKILESVMEEDYNNPEFQA 754

  Fly   819 LIDDLEENMQQLGVVSFRIRDTSMEEIFLRFG--CED-NDQSGAFQSHENAQVLLEEYYSTLAEA 880
            |..|::|..:.|.:.:..:..:|:|::|::.|  |:| .:.:|..:..|.     :|.:|||.:.
 Worm   755 LEPDIQEKCRTLELATIGVSMSSLEQVFIKIGDECDDIMNGTGVDKKTER-----QEKFSTLVQY 814

  Fly   881 NEKGRRTGWKLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMALVAVCTFSSIFIYGKNYELEPLT 945
            ..:..:.|:....:...|::.||....:|:.:.:..::: :.|:.:..|:..|:     .|||..
 Worm   815 KIQQPKQGFSKLMMVVWALLQKRAYYLYRNPVQITLQII-LPLLTLWLFAVPFL-----RLEPKP 873

  Fly   946 FNLSQLHTVD--------AFVELFSEEED----VKDMHAYYTELLYWYDAHVATLTKNRHNAYAL 998
            ..||.:.:.|        ..::|.:|.:|    ..:..:.:..:...|:.|...|.|.....:..
 Worm   874 PKLSDIESFDPSQYPHSTVLLQLENENDDRLANYLNSFSNFEVVKVGYNDHYGYLVKKYSQVFKT 938

  Fly   999 LTQNQFTAHVNSRYIFGATFDQKIVTAWFNNIPLHSAPYALNVVHNAVARHLFDEEATIDVTLAP 1063
            |   .|...||.:   |.:...||.....|      |...:|::  |.|.:|.|...|      .
 Worm   939 L---GFIVKVNKK---GDSKFYKISQGDKN------AAILMNII--ASAMYLRDPSVT------K 983

  Fly  1064 LPFRTA-INTFPPSSHTFGGCLAF----GICF--VLTFIWPAFAIYMITERGSLLKKQQFLAGVR 1121
            ||..|: :.........:.|..:|    .|.|  ||..|:....:|:|.|:......||:|.|:.
 Worm   984 LPHVTSRVIWMNDPKIKYEGLASFFLFENIFFLLVLAGIFIQSTVYLIEEKICKFAHQQYLTGLS 1048

  Fly  1122 VCSYWTFTVLYDLL---FLLIFCACVVVMVALYENPNHD--VMLYGYISVTLMLGGFWVILLAYL 1181
            ..:||....|:|.|   |.|::....::...:.:...|:  |:.||.:        |:...|.||
 Worm  1049 TIAYWGVVFLWDFLLFTFFLLYTIGFLISFGVLQGHIHEIVVIFYGLL--------FYFAPLVYL 1105

  Fly  1182 MASLCRNPCYG-FL--WLCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYEF 1243
            .::|...|..| ||  ..|.|..:.....|:.:...|                  |.|.....|:
 Worm  1106 TSALINTPTRGNFLLYMFCCIPWLAYSIVSELHNFPP------------------IQKYSDEIEY 1152

  Fly  1244 KLICMDPVVNFTS--VEVFKCNSIPNCCIKSNYGTFT-----AGIYHDLVILTLLDI---ILLAC 1298
            .....:|.:.|.:  :::...| .|...:..::...|     .||:.:|:.|....|   |||.|
 Worm  1153 GFRIFNPSIGFLAGLMKIAALN-YPKSGLDKHFEHLTNLWTYEGIFFELMFLFFGGIFLTILLGC 1216

  Fly  1299 LFVSEYHSILGFADCRLDTRTNESPDSNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAV 1363
            ..:..:...     |...||....|   :|.:.:.||.|....    ||....:.|.::::...|
 Worm  1217 ATLKPFRRA-----CFRGTRRRSQP---RERKRYKGIESCKAV----KEEEQLVQEVDKNETVLV 1269

  Fly  1364 GIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWI--HDYSVN 1426
            ..|:|..:.:.|.:.||..::...||..:.|||.:||||...::...|....|...|  ||.:..
 Worm  1270 IDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGGSATIDGHDITET 1334

  Fly  1427 THRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVR 1491
            .|       :|||||.|::..:.:.|:.|.|.|.|||:.:  .:|:.|.:|..||::....:.|:
 Worm  1335 IH-------IGYCPQFDAMLQQISCRQTLRIMAKLQGYPN--VKEVVELVLDCVGMSDFGYKLVK 1390

  Fly  1492 MCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGS-SFLYTMLTGLDA 1555
            .|:.||.|::....|::.....|.:|...||:||..:|.|..:...|:.... |.:.|..:..:.
 Worm  1391 NCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSHSMEEC 1455

  Fly  1556 ERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNK 1620
            |.|..|..:|.:|::..:....:....|.:.|.:.:                  ::|  .:...:
 Worm  1456 EALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTL------------------ILN--SLEDLE 1500

  Fly  1621 KFSAFMEIKFPDAVLTIERDD---SMVFVLPLG-TTTFSEIFLTLRKDAFEMNIEDYFITRNML- 1680
            .....:..:.|||||......   |:|:.||.. :..:||.:..:...|.:.|.:||.:|:..| 
 Worm  1501 SVCVIVSEEMPDAVLKTPESSLTTSIVWELPKSKSDKWSEKYNQVEVLAKKANAKDYMLTQASLE 1565

  Fly  1681 -VGFQIFTYDQHQD 1693
             ...::.|.::.::
 Worm  1566 DTFIRLITTEEEEE 1579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 47/229 (21%)
CcmA 541..848 CDD:224054 92/351 (26%)
ABC_subfamily_A 541..761 CDD:213230 65/232 (28%)
ABC2_membrane_3 911..>1189 CDD:289468 64/301 (21%)
ABC2_membrane <1080..>1188 CDD:304374 30/118 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 58/209 (28%)
PRK14255 1371..1586 CDD:172743 59/217 (27%)
abt-5NP_001364572.1 rim_protein <419..1569 CDD:130324 295/1288 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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