DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and pgp-2

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_001300410.1 Gene:pgp-2 / 172262 WormBaseID:WBGene00003996 Length:1296 Species:Caenorhabditis elegans


Alignment Length:1439 Identity:278/1439 - (19%)
Similarity:486/1439 - (33%) Gaps:476/1439 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 SVSESFLVLTSH------KSLPTIQIRRFPITGREQDPLMGNLNYGMPFI-IIIGFLFPAQL--- 288
            |:.||.:.||::      :.:..:.:    |||.....:.|   .|.|.: |::|.:....|   
 Worm    32 SIDESTVKLTNYGIFYYTQGVDLLLL----ITGTVAAVIHG---AGFPLLAIVLGGMTTVFLRAQ 89

  Fly   289 ---FVWQV------------VSEKQSQVRQFLI-NMNIGNLIHFVSW--------YLKGLIYEMI 329
               ||..|            :.|..|:|.::.| .:.:|.|:.|.|:        |.:.|::::.
 Worm    90 NSDFVVGVDNVNPEGLVPISLDEFNSEVVKYCIYYLVLGVLMFFTSYVQIACFESYAERLVHKLR 154

  Fly   330 SSLIIAAL-LKIRW--DQDHGVLTQT-------------PWYILILVLFCYNCAAVAFAIMVAAF 378
            .:.:.|.| .:|:|  .|..|.||..             ..:.|::.:|    ||......|..|
 Worm   155 QNYLKAILRQQIQWFDKQQTGNLTARLTDDLERVREGLGDKFALLVQMF----AAFLAGYGVGFF 215

  Fly   379 FRNALNAVRVLTILWIMSYVPTFILSNNLEGNIHALR----YVSYALPNVVATLVIEFLIERESI 439
            :..::..|       :|.:.|..:||........|.|    ..:||:...:|.       |..|.
 Worm   216 YSWSMTLV-------MMGFAPLIVLSGAKMSKSMATRTRVEQETYAVAGAIAE-------ETFSS 266

  Fly   440 VHITWEDSGYRLNYDGGHITVTASSWIFMLNAL---------VYCAIGLYVD------------- 482
            :......:|::...|.            ..|||         .||.:|:.|.             
 Worm   267 IRTVHSLNGHKRELDR------------FYNALEVGRQTGIVKYCYMGIGVGFSNLCMYSSYALA 319

  Fly   483 MWRGGDRSGKKMKKPNTNASVQEDPYHERGDSFT-----------------HQ---GQAIGVNST 527
            .|.|             :..:..||..:||..||                 |.   |.|.|..||
 Worm   320 FWYG-------------STLIINDPTFDRGLIFTVFFAVLSGSTSLGGALPHLASFGTARGAAST 371

  Fly   528 KIYEVEPSHRRF---------------KLKIKKLCKRF-ATNDRPALNLFSWNVYENEVTVLMGH 576
             :..|..||.:.               .:..|.:..|: :..|...|...|..:...:...|:|.
 Worm   372 -VLRVINSHPKIDPYSLEGILVDNMKGDISFKDVHFRYPSRKDIHVLKGISLELKAGDKIALVGS 435

  Fly   577 NGCGKSTLLKILAGLVEPSRGTVMIS-----SHNIQTERKAASMELGIAFGHDMLLTGFTVIDYL 636
            :||||||::.:|....:|::|.|:|.     ..|:.:.|:    ::||.....:|..| |:.:.:
 Worm   436 SGCGKSTIVNLLQRFYDPTKGRVLIDGVDLREVNVHSLRE----QIGIVSQEPVLFDG-TIYENI 495

  Fly   637 RF------------ICRVKGLHNNIE--IDGQSNYFLNV----LQIGGLKTKRIRTLTDRDLCLV 683
            :.            .|::...::.|:  .||   |...|    :|:.|.:.:||           
 Worm   496 KMGNEHATHDQVVEACKMANANDFIKRLPDG---YGTRVGEKGVQLSGGQKQRI----------- 546

  Fly   684 SICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSN 748
            :|..|.|.|..|:|:|:..|.||...:..|...:::.::.||.|:|::..:...|: ||:.:...
 Worm   547 AIARALVKNPKILLLDEATSALDTEAEREVQGALDQAQAGRTTIIVAHRLSTIRNV-DRIFVFKA 610

  Fly   749 GELKCTGTKPFLKNMYGHGYRLTCVK---------GKNYKRDELFGMMNSYMPNMSIERDIGYKV 804
            |.:..:|:...|.:..|..|.:|..:         ||:.: |.:....:|::...|..|......
 Worm   611 GNIVESGSHEELMSKQGIFYDMTQAQVVRQQQQEAGKDIE-DTISESAHSHLSRKSSTRSAISIA 674

  Fly   805 TFV--LENKFEDQFPMLIDDLEENMQQLGVVSFRIRD----------TSMEEIFLRFGCEDNDQS 857
            |.:  |..:.|     |||.......| .|:..||..          |||.:|| :|        
 Worm   675 TSIHQLAEEVE-----LIDPFNGQTNQ-DVIRSRILSAFGGECKAPPTSMFKIF-KF-------- 724

  Fly   858 GAFQSHENAQVLLEEYYSTLAEANEKGRRTGWKL-----FFLHGR-----AVIYKRWIAAHRHWI 912
                                     .|.:.||.:     .|:.|.     |::|..         
 Worm   725 -------------------------NGDKVGWFIGGIFGAFIFGSVTPVFALVYAE--------- 755

  Fly   913 VLIFEVLAMALVAVCTFSSIFIYGKNYELEPLTF----------------NLSQLHTVDAFVELF 961
              ||.|  .:|.|....::::.:...:.|..:||                :|:.....:||..|.
 Worm   756 --IFNV--YSLPADQMQANVYFWCGMFVLMGITFFVGFFTSANCLGRCGESLTMKLRFEAFKNLL 816

  Fly   962 SEEEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIF------------ 1014
              .:|:    |:|.:|              ||....|.|:.. |...|.||:|            
 Worm   817 --RQDI----AFYDDL--------------RHGTGKLCTRFA-TDAPNVRYVFTRLPVVLASIVT 860

  Fly  1015 -------GATFDQKIVTAWFNNIPL------------------------HSAPYALNVVHNAVAR 1048
                   |..:..::.......:||                        .:...|...|.:....
 Worm   861 ICGALGIGFYYGWQLALILVVMVPLLVMGGYFEMQMRFGKQIRDTQLLEEAGKVASQAVEHIRTV 925

  Fly  1049 HLFDEEATIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKK 1113
            |..:.:.....|.... .|...||....:||:|...||...  |.|...|.|.|:    ||:...
 Worm   926 HSLNRQEQFHFTYCEY-LREPFNTNLKHAHTYGAVFAFSQS--LIFFMYAAAFYL----GSIFVN 983

  Fly  1114 QQFLAGVRVCSYWTFTVLYDLLFLLIFCACVV------------------VMVALYENPNH-DVM 1159
            ||.:..:.|         |.:.|.:.||..::                  ::..|.|:|.. |.:
 Worm   984 QQAMQPIDV---------YRVFFAISFCGQMIGNTTSFIPDVVKARLAASLLFYLIEHPTPIDSL 1039

  Fly  1160 --------LYGYISV------------TLMLGGFWVILLAYLMASLCRNPCYGFLWLCGINSI-G 1203
                    :.|.||:            |.:|.||.:.:.|....:|..:..      ||.::| |
 Worm  1040 SDSGIVKPITGNISIRNVFFNYPTRKDTKVLQGFTLDIKAGKTVALVGHSG------CGKSTIMG 1098

  Fly  1204 LVCFSQFYRTHPESMLLEPTFMAMYTVATV---ICKLFMIYEFKLICMDPVVNFTSVEVFKCNSI 1265
            |:  .:||......::::...:....::::   :|         ::..:|.       :|.|...
 Worm  1099 LL--ERFYNQDKGMIMIDGDNIRNLNISSLREQVC---------IVSQEPT-------LFDCTIG 1145

  Fly  1266 PNCCIKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFADCRLDTRTNESP---DSNQ 1327
            .|.|    |||.....|.::|         .|....:.::.|||..| ..||...|..   ...|
 Worm  1146 ENIC----YGTNRNVTYQEIV---------EAAKMANIHNFILGLPD-GYDTHVGEKGTQLSGGQ 1196

  Fly  1328 ESR-AFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLS 1391
            :.| |....|....:.|:..|.||.| :.|..|.....:....:.|...|:.....|:..|:.::
 Worm  1197 KQRIAIARALVRSPSVLLLDEATSAL-DTESEKIVQEALDAAKQGRTCLVIAHRLSTIQNSDVIA 1260

  Fly  1392 ITGANNSGK 1400
            |.   :.||
 Worm  1261 IV---SEGK 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 53/273 (19%)
CcmA 541..848 CDD:224054 80/351 (23%)
ABC_subfamily_A 541..761 CDD:213230 55/243 (23%)
ABC2_membrane_3 911..>1189 CDD:289468 67/375 (18%)
ABC2_membrane <1080..>1188 CDD:304374 30/146 (21%)
ABC_subfamily_A 1370..1577 CDD:213230 7/31 (23%)
PRK14255 1371..1586 CDD:172743 7/30 (23%)
pgp-2NP_001300410.1 PTZ00265 56..1286 CDD:240339 273/1415 (19%)
ABC_membrane 61..349 CDD:279056 62/333 (19%)
ABC_MTABC3_MDL1_MDL2 399..632 CDD:213216 58/252 (23%)
ABC_membrane 736..999 CDD:279056 56/312 (18%)
ABC_MTABC3_MDL1_MDL2 1052..1290 CDD:213216 52/257 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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