DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and abt-2

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:NP_490949.3 Gene:abt-2 / 171782 WormBaseID:WBGene00000020 Length:2146 Species:Caenorhabditis elegans


Alignment Length:1751 Identity:367/1751 - (20%)
Similarity:670/1751 - (38%) Gaps:371/1751 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 CF--DGSPFVEDQ-------VFEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYN- 201
            ||  |...||.|:       |...||.:.::.|  :.|    :.|.....||       .|.|. 
 Worm   535 CFLLDRFRFVTDEKELETNAVCLMDTHQYFTGI--VFN----IDSNATEFDG-------FTTYKI 586

  Fly   202 -------DDPNTFVLTRLNQPYEGG----FVGYVREGFIRLQKSVSESFLVLTSHKSLPTI---- 251
                   |...:|:.::.| |:...    .:.|:..||..||:|:..:.:...::::...:    
 Worm   587 RHYPEMVDSTTSFMDSKSN-PFSRDKPLIDLKYITFGFSFLQESIDRAIMSELTNQTDANLGVYA 650

  Fly   252 QIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHF 316
            |...:|.|.::    ..|:...||..::|.|:||:.|.|..:|.||:.::::.:..|.:|:.:||
 Worm   651 QQEPYPCTVKD----TFNVALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHF 711

  Fly   317 VSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRN 381
            :||.|..|:...||.|||:.:.|:.     .:...|.:.:|:.||..:..:::|.:|..:..|.|
 Worm   712 ISWGLISLVLNFISVLIISIISKVA-----KIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTN 771

  Fly   382 ALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIERESIVHITWED 446
            |..|.....:||.:.::|..:|..:...: .....:|..||........:.|....::...||.|
 Worm   772 ANIATAATCVLWFVFFIPFQLLRTDRISS-PTFNRISLILPPTAMGHCFKLLESFNAMERATWSD 835

  Fly   447 SGYRLNYDGGHITVTASSWIFMLNALVYCAIGLYVDMWRGGDRSGKKMKKP-------------- 497
            . :.:|.....|:|.....:.:::..|:..:..|:.....||..   :::|              
 Worm   836 L-WEMNNPVLGISVELCMIMLVVDTAVFLILAWYISAVAPGDFG---VRQPLWFPFTLKYWAPGL 896

  Fly   498 -NTNASVQEDPYHE---RGDSF----THQGQAIGVNS-TKIYEVEPSHRRFKLKIKKLCKRFATN 553
             .......:|.:.:   ..|||    |:...|:.:|| :|:||                     |
 Worm   897 YKNRVEFVDDEHFDTIPNSDSFDSEPTNLTLAVHINSMSKVYE---------------------N 940

  Fly   554 DRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELG 618
            ...||:..:..:||.::|.|:||||.||:|.:.||.||..||.||..|...:|:|:.:.....||
 Worm   941 GTKALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLG 1005

  Fly   619 IAFGHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQIGGLKTKRIRTLT---DRDL 680
            |...|::|.:..||.:.||....:||:.:: |:..|.:..|..:.:.....|...||:   .|.|
 Worm  1006 ICPQHNVLFSHLTVSEQLRLFAALKGVPDS-ELTSQVDEILASVSLTEKANKLASTLSGGMKRRL 1069

  Fly   681 CLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAI 745
            |   |..||:|.|..:::|:..:.:|...:..:|.|:...|..|||:|.::....|:.::||:||
 Worm  1070 C---IGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNKEGRTILLSTHHMDEADVLSDRIAI 1131

  Fly   746 MSNGELKCTGTKPFL----KNMYGHGYRLTCVKGKNY----KRDELF------------------ 784
            :|.     ...||.|    :.::.|.|.|...: .||    ||..||                  
 Worm  1132 LSQ-----DFEKPDLLDGKRLIFQHFYALLVCR-INYTLKSKRTFLFQVIIPLFLLALAELFVLL 1190

  Fly   785 -------GMMNSYMPNMSIERDI-GYKVTFVLENKFEDQFPMLIDDLEENMQQLGV-------VS 834
                   .:|.| ||.:.:|..| |....|.:.:....:.....|.|.......|.       |.
 Worm  1191 QVSTARPDLMVS-MPPLPLETSIMGNHSDFYVNSWDTAENSTANDILHAMFSSPGTGPRCAKDVP 1254

  Fly   835 FRIRDTSMEEIFLR----FG-----------CEDNDQ-----SGAFQSHE-------NAQVL--L 870
            ..:.||...|:..|    ||           ..||:.     .|.|...|       ||.:.  .
 Worm  1255 NDLLDTMRRELMFRNRYGFGRNKPAPGVDKDSVDNEYQCQNIQGEFDYTEDISNATYNAPIYCGC 1319

  Fly   871 EEYYSTLAEANEKGRRTGW-------KLFFLHGRAVIYKRWI----------------------- 905
            |::.......:.|...|.|       ::|.|.||.:...|.|                       
 Worm  1320 EDFGWNCTLEDWKWNETNWLRLNTTDRIFDLTGRNLTQFRLITRFAQLANTTAPFFLGGFSLGHV 1384

  Fly   906 -----------AAHRHWIVLIFEVL-AMALVAVCTFSSIFIYGKNYELEPLTFNLSQLHTVDAFV 958
                       .:.|.|:..|.::. :|.::.:.|..          :||.|..:     :|.|.
 Worm  1385 NQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTG----------IEPATPKV-----LDPFA 1434

  Fly   959 ELFSEEEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYIFGATFDQKIV 1023
            :..:..:.|.|       ||...|.        |.|                            |
 Worm  1435 QNITLNQVVND-------LLQNLDV--------REN----------------------------V 1456

  Fly  1024 TAWFNNIPLHSAPYALNVVHNAVARHLFDEEATID------VTLAPLPFRTAINTFPPSSHTFGG 1082
            ..||||......|.|.|::.||:.|   .|:..||      :|:.....:|...|...::..|..
 Worm  1457 KVWFNNKIWPGFPIASNILSNALLR---QEDYAIDPEDLGILTMNHPMNKTISQTLDQNALKFTQ 1518

  Fly  1083 CLA-FGI---CFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYDLLFLLIFCAC 1143
            .|| |.|   ..||:.|...|.:|::.:|.......|.:.|:|..:||..:.|||   ::::...
 Worm  1519 ALAVFRITILLLVLSMIPAGFTVYLVEDRICEALHLQLVGGLRKVTYWVTSYLYD---MVVYTLV 1580

  Fly  1144 VVVMVALY-----ENPNHDVMLYGYISVTLMLGGFWVILLAYLMASLCRNPCYGFLWLCGINS-- 1201
            ::|::.:|     .:...|...:....:...:.|...||.||:...........|: |..|.|  
 Worm  1581 IIVIMLIYLCFRVSDFTADGATFFAFLLLFFVHGMSTILYAYVFQKAFSVAALSFV-LIAIGSYF 1644

  Fly  1202 IGLVCFSQFYRTHPESMLL-EPTFMAMYTVATV-------------ICKLFMIYEFKLICMDPVV 1252
            :|:||.......  ||::: :|:.:..:||.::             |.:..|||:.:.|..:.:.
 Worm  1645 VGIVCALTVIML--ESLMVQDPSLIPAHTVCSIVFLVLPQYNLGIAIFRGLMIYQVRAIGSNFLQ 1707

  Fly  1253 NFTSVEVFKCNSIPNCCIKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFADCR--- 1314
            .....::.....:|:.......|.....::..::|.|:       ||..|:... .||...|   
 Worm  1708 QMNRPDMINQLPLPSLLAFDQMGIHIMCLFIHVIIATI-------CLIFSQMDE-FGFVRKRERN 1764

  Fly  1315 -LDTRTNESPDSNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKYAAVGIGIVSKYRRNRV-L 1377
             .|......|.:           .:|...:.:::....:..:....:|.:...:...|....: :
 Worm  1765 LTDAMMLREPST-----------CDDEDVVKERQRVDAIPMDSSDNHALIVRNLAKAYNPELLAV 1818

  Fly  1378 RDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNT---HRVQCYRMVGYC 1439
            :.:.|.:...||..:.|.|.:||||...::..:.:...|.:.:.:..:||   ..|:.::.:|||
 Worm  1819 KGISFAVEPGECFGLLGLNGAGKTTTFAMLTAKIRPGHGSIEMQNTRINTGSFSDVRNFQQLGYC 1883

  Fly  1440 PQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFA 1504
            ||.|:|..:.:.||.|..:|.::|........:.:.||..:.|.|..|......:.|..|:|..|
 Worm  1884 PQFDALNMKLSTRENLKFYARIRGIVPTQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKLSVA 1948

  Fly  1505 YAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQ 1569
            .|::..|.||.:|...||:||..::.:..:...:...|.:.:.|..:..:.|.|..|..::..|:
 Worm  1949 VALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGKAVVLTSHSMEECEALCTRIAIMDRGR 2013

  Fly  1570 LWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAV 1634
            :..:.........|..|..|.::..:..|.                    |:.:..|..|..|..
 Worm  2014 IRCLGGKQHLKSKYGKGSMLTMKMGKDENA--------------------KEIAGIMRSKLGDGS 2058

  Fly  1635 LTIERDDSMVFV-LPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIFTYDQHQDN 1694
            .......|.:|: :..||.:.:.:...:.:.....:::|:.:|::.|  ..:|......||
 Worm  2059 RVEAIHCSTIFIHIEQGTASVARVLEIVNQVKKMYDVDDFTLTQSTL--DNVFQSIAESDN 2117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 51/216 (24%)
CcmA 541..848 CDD:224054 92/350 (26%)
ABC_subfamily_A 541..761 CDD:213230 68/226 (30%)
ABC2_membrane_3 911..>1189 CDD:289468 60/293 (20%)
ABC2_membrane <1080..>1188 CDD:304374 27/116 (23%)
ABC_subfamily_A 1370..1577 CDD:213230 50/210 (24%)
PRK14255 1371..1586 CDD:172743 51/218 (23%)
abt-2NP_490949.3 rim_protein 39..2117 CDD:130324 365/1749 (21%)
ABC_subfamily_A 929..1134 CDD:213230 69/229 (30%)
ABC_subfamily_A 1802..2024 CDD:213230 50/221 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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