DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and ABCA13

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_011513432.1 Gene:ABCA13 / 154664 HGNCID:14638 Length:5059 Species:Homo sapiens


Alignment Length:1861 Identity:399/1861 - (21%)
Similarity:733/1861 - (39%) Gaps:440/1861 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IDLDRSWMQMVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQ-----KQIEP 121
            ||:|:    :.|||:       ||....:....|...|    |:....:::..:.     .:.:.
Human  3389 IDVDK----LTEKLQ-------TYGGLLDEMFNHAGAG----RFRFLGSILVNLSSCVALNRFQA 3438

  Fly   122 MTSVGFEDCEEMRESVIENGLFAGLCFDGSPFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRM 186
            :.||...: .:..|.:.:|...|.:.|..|.|  |:.|..::::    :.|.::|||.......:
Human  3439 LQSVDILE-TKAHELLQQNSFLASIIFSNSLF--DKNFRSESVK----LPPHVSYTIRTNVLYSV 3496

  Fly   187 LDGDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSES-FLVLTSHKSL-P 249
            .....:..:|    ...|.       |.|.:|....||   |..||..:..: .||.|..::| |
Human  3497 RTDVVKNPSW----KFHPQ-------NLPADGFKYNYV---FAPLQDMIERAIILVQTGQEALEP 3547

  Fly   250 TIQIRRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLI 314
            ..|.:..|......|..:.|:.:..|.|:::.::......|.::|.|::.|:.:::..|.:..:|
Human  3548 AAQTQAAPYPCHTSDLFLNNVGFFFPLIMMLTWMVSVASMVRKLVYEQEIQIEEYMRMMGVHPVI 3612

  Fly   315 HFVSWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWYILILVLFCYNCAAVAFAIMVAAFF 379
            ||::|:|:.:....|||..:|.:||     ..|:...:..:|:.|.|..:..:.|..:.:::|||
Human  3613 HFLAWFLENMAVLTISSATLAIVLK-----TSGIFAHSNTFIVFLFLLDFGMSVVMLSYLLSAFF 3672

  Fly   380 RNALNAVRVLTILWIMSYVP---TFILSNNLEGNIHALRYVSYALPNVVAT-------LVIEFLI 434
            ..|..|....::::::|::|   ..:|.|.|.       :|:.....:::|       ..|.||.
Human  3673 SQANTAALCTSLVYMISFLPYIVLLVLHNQLS-------FVNQTFLCLLSTTAFGQGVFFITFLE 3730

  Fly   435 ERESIVHITWEDSGYRLNYDGGHITVTASSWIFMLNALVYCAIGLYV------------------ 481
            .:|:  .|.|.:. |:....|| :|.....|:.:.::.:|...|.|:                  
Human  3731 GQET--GIQWNNM-YQALEQGG-MTFGWVCWMILFDSSLYFLCGWYLSNLIPGTFGLRKPWYFPF 3791

  Fly   482 --DMWRG-GDRSGKKMKKPNTNASVQEDPYHERGDSFTH-----QGQAIG---VNSTKIYEVEPS 535
              ..|:. |....|:....:::.....:.:..:|.|..:     :|.|.|   |:.||.||   .
Human  3792 TASYWKSVGFLVEKRQYFLSSSLFFFNENFDNKGSSLQNREGELEGSAPGVTLVSVTKEYE---G 3853

  Fly   536 HRRFKLKIKKLCKRFATNDRPALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVM 600
            |   |..::.|...|               |.:::|.|:|.||.||:|::.:|.||..|:.||::
Human  3854 H---KAVVQDLSLTF---------------YRDQITALLGTNGAGKTTIISMLTGLHPPTSGTII 3900

  Fly   601 ISSHNIQTERKAASMELGIAFGHDMLLTGFTVIDYLRFICRVKGLH-NNIEIDGQSNYFLNVLQI 664
            |:..|:||:.....||||:....|:||...||.::|.....:|... ...|:..|.|..|..:.:
Human  3901 INGKNLQTDLSRVRMELGVCPQQDILLDNLTVREHLLLFASIKAPQWTKKELHQQVNQTLQDVDL 3965

  Fly   665 ------------GGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLI 717
                        ||||.|            :|:..||:|.|..:::|:..|.:|..::..:|:::
Human  3966 TQHQHKQTRALSGGLKRK------------LSLGIAFMGMSRTVVLDEPTSGVDPCSRHSLWDIL 4018

  Fly   718 NEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDE 782
            .:.:..||||..::....||.::||:|::.:|.|:|.|....||..||.|.|||..:..:.....
Human  4019 LKYREGRTIIFTTHHLDEAEALSDRVAVLQHGRLRCCGPPFCLKEAYGQGLRLTLTRQPSVLEAH 4083

  Fly   783 -------LFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQFPM--LIDDLEENMQQLGVVSFRIR 838
                   :..::..|:|...::...|.::|:.:. |..|:..:  |...|:||:.||.:..:.|.
Human  4084 DLKDMACVTSLIKIYIPQAFLKDSSGSELTYTIP-KDTDKACLKGLFQALDENLHQLHLTGYGIS 4147

  Fly   839 DTSMEEIFLRFGCEDNDQS-------GAFQSH-------------------ENAQVLLEEYYSTL 877
            ||::||:||....:.|.:|       ...|:|                   :..|:|..:..:.|
Human  4148 DTTLEEVFLMLLQDSNKKSHIALGTESELQNHRPTGHLSGYCGSLARPATVQGVQLLRAQVAAIL 4212

  Fly   878 AEANEKGRRTGWKLFFLHGRAVIYKRWIAAHRHWIVLIFEVLAMALVAVCTFSSIFIYGKNYELE 942
            |....:..|.|             |..:|  ...:.::|..|||.|..|...::        |..
Human  4213 ARRLRRTLRAG-------------KSTLA--DLLLPVLFVALAMGLFMVRPLAT--------EYP 4254

  Fly   943 PLTFNLSQLHTVDAFVELFS-----------------EEEDV--KDMHAYYTELLYW-------- 980
            ||  .|:..|...|....||                 .::|:  .|::........|        
Human  4255 PL--RLTPGHYQRAETYFFSSSGGDNLDLTRVLLRKFRDQDLPCADLNPRQKNSSCWRTDPFSHP 4317

  Fly   981 --YDAHVATLTKNR---------HNAYALLTQNQFTAHVNSRYIF---------GATFDQKI--- 1022
              .|:.......||         |..:.||..:.|..   ..|:.         |.:|..||   
Human  4318 EFQDSCGCLKCPNRSASAPYLTNHLGHTLLNLSGFNM---EEYLLAPSEKPRLGGWSFGLKIPSE 4379

  Fly  1023 --------------VTAWFNNIPLHSAPYALNVVHNAVA-RHLFDEEATID-----VTLAPLPFR 1067
                          ...|:|....||.|..||.::|.:. :||   ..|:|     :||      
Human  4380 AGGANGNISKPPTLAKVWYNQKGFHSLPSYLNHLNNLILWQHL---PPTVDWRQYGITL------ 4435

  Fly  1068 TAINTFPPSSHTFGGCL-------------AFGICFVLTF--IWPAFAIYMITERGSLLKKQQFL 1117
                    .||.:||.|             ...:|.||.|  :..:....::.:|....|:.|.:
Human  4436 --------YSHPYGGALLNEDKILESIRQCGVALCIVLGFSILSASIGSSVVRDRVIGAKRLQHI 4492

  Fly  1118 AGVRVCSYWTFTVLYDLLFLLI-FCACVVVMVALY-------ENPNHDVM---LYGYISVTLMLG 1171
            :|:....||....|||:||.|: .|.||.|:||..       :|.....:   |:||.::..|  
Human  4493 SGLGYRMYWFTNFLYDMLFYLVSVCLCVAVIVAFQLTAFTFRKNLAATALLLSLFGYATLPWM-- 4555

  Fly  1172 GFWVILLAYLMASLCRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLE--PTFMAMYTVATVI 1234
                    |||:.:..:....|:....:|.|..:|          :||:.  |..:|:.:.|..:
Human  4556 --------YLMSRIFSSSDVAFISYVSLNFIFGLC----------TMLITIMPRLLAIISKAKNL 4602

  Fly  1235 CKLFMIYE-----FKLICMDPVVNFTSVEVFKCNSIPNCCIKSNYG----------TFTAGIYHD 1284
            ..::.:.:     |...|:...:    ||:  |.:.....:..|:|          .|...|:..
Human  4603 QNIYDVLKWVFTIFPQFCLGQGL----VEL--CYNQIKYDLTHNFGIDSYVSPFEMNFLGWIFVQ 4661

  Fly  1285 L----VILTLLDIILLACLFVSEYHSIL----GFADCRLDTRTNESPD-SNQESRAFPGILSNDT 1340
            |    .:|.||.::|        :..:|    |.:..:...::::..| ..:|.|.|.|..:.|.
Human  4662 LASQGTVLLLLRVLL--------HWDLLRWPRGHSTLQGTVKSSKDTDVEKEEKRVFEGRTNGDI 4718

  Fly  1341 AALVDKEHTSRLNEEERSKYAAVGIGIVSK-YRR---NRV-LRDLDFTLAKSECLSITGANNSGK 1400
            ..|.:                      :|| |||   |.: ::|:...:.|.||..:.|.|.:||
Human  4719 LVLYN----------------------LSKHYRRFFQNIIAVQDISLGIPKGECFGLLGVNGAGK 4761

  Fly  1401 TTLLKVVVNETKMNAGQLWIHD--------YSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYI 1457
            :|..|::..|..:.:|...|..        .|..|..|    ::|||||:|:|....|..|.||.
Human  4762 STTFKMLNGEVSLTSGHAIIRTPMGDAVDLSSAGTAGV----LIGYCPQQDALDELLTGWEHLYY 4822

  Fly  1458 HAMLQGHRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAG 1522
            :..|:|...:...|::..|:|.:.|....::.|...:.|..|:|..|.|::|.||::.:|...:|
Human  4823 YCSLRGIPRQCIPEVAGDLIRRLHLEAHADKPVATYSGGTKRKLSTALALVGKPDILLLDEPSSG 4887

  Fly  1523 LDPTGKRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGY 1587
            :||..||.:..........|.:.:.|..:..:.|.|..|..:::.|....:.........:..||
Human  4888 MDPCSKRYLWQTIMKEVREGCAAVLTSHSMEECEALCTRLAIMVNGSFKCLGSPQHIKNRFGDGY 4952

  Fly  1588 QLEVRFKRKVNPNVSMSRATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMVFVLPLGTT 1652
            .::|...::.|.:.::|       :|            :::.||......:..:.:.:.:|....
Human  4953 TVKVWLCKEANQHCTVS-------DH------------LKLYFPGIQFKGQHLNLLEYHVPKRWG 4998

  Fly  1653 TFSEIFLTLRKDAFEMNIEDYFITRNMLVG-FQIFTYDQHQ 1692
            ..:::|..:..:...:||:.|.|.:..|.. |..|..:|.|
Human  4999 CLADLFKVIENNKTFLNIKHYSINQTTLEQVFINFASEQQQ 5039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 50/226 (22%)
CcmA 541..848 CDD:224054 89/328 (27%)
ABC_subfamily_A 541..761 CDD:213230 63/232 (27%)
ABC2_membrane_3 911..>1189 CDD:289468 78/373 (21%)
ABC2_membrane <1080..>1188 CDD:304374 33/133 (25%)
ABC_subfamily_A 1370..1577 CDD:213230 59/219 (27%)
PRK14255 1371..1586 CDD:172743 58/226 (26%)
ABCA13XP_011513432.1 rim_protein 3068..5049 CDD:130324 399/1861 (21%)
ABC_subfamily_A 3842..4062 CDD:213230 70/252 (28%)
ABC_subfamily_A 4719..4945 CDD:213230 61/251 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148385
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.850

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