Sequence 1: | NP_001259763.1 | Gene: | CG1494 / 33102 | FlyBaseID: | FBgn0031169 | Length: | 1695 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_031404.1 | Gene: | Abca4 / 11304 | MGIID: | 109424 | Length: | 2310 | Species: | Mus musculus |
Alignment Length: | 2042 | Identity: | 438/2042 - (21%) |
---|---|---|---|
Similarity: | 786/2042 - (38%) | Gaps: | 539/2042 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 ANPLELLVILLVPPLFTLVAVLMRFFIP-------VNHRSDTVYDPID----LDRSWMQMVEKL- 75
Fly 76 ---EKARQVADTYNVKGNP--------------FTPHLVIGW---APKRYGIFQAMMRRVQKQIE 120
Fly 121 PMTSVGFEDCEEMRESVI---------------------------------ENGLFAGLCFDGS- 151
Fly 152 PFVEDQVFEEDTLESYSNIQPMLNYTILLPSELRMLDGDFRMANWMTLYNDDPNTFVLTRLNQPY 216
Fly 217 EGGFVGYVREGFIRLQKSVSESFLVLTSHKSLPTI--QIRRFPITGREQDPLMGNLNYGMPFIII 279
Fly 280 IGFLFPAQLFVWQVVSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQ 344
Fly 345 DHG-VLTQTPWYILILVLFCYNCAAVAFAIMVAAFFRNALNAVRVLTILWIMSYVPTFI------ 402
Fly 403 -LSNNLEGNIHALRYVSYALPNVVATLVIEFLIE-RESIVHITWEDSGYRLNYDGGHITVTASSW 465
Fly 466 IFMLNALVYCAIGLYVDM--------------------WRGGD----RSGKKMKKPNTNASVQED 506
Fly 507 PYHERG--DSFTHQ---GQAIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDRPALNLFSWNVY 566
Fly 567 ENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAFGHDMLLTGFT 631
Fly 632 VIDYLRFICRVKGL---HNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTD------RDLCLVSICC 687
Fly 688 AFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELK 752
Fly 753 CTGTKPFLKNMYGHGYRLTCV-KGKNYKR------------------------------------ 780
Fly 781 -DELFGMMNSYMPNMSIERDIGYKVTFVLENK-FEDQ-FPMLIDDLEENMQQLGVVSFRIRDTSM 842
Fly 843 EEIFLRF----GCEDNDQSGAFQSHENAQV---------LLEEYYSTLAEANE----------KG 884
Fly 885 R------------RTGWKLFFLHGRAVIYKRW---IAAHRHWIVLI-----FEVLAMAL-VAVCT 928
Fly 929 FSSI-------FIYGKNYEL----EPLTFNLSQLHTV----DAFVELFSEEEDVKD--------- 969
Fly 970 ---------MHAYYTELLYWYDAHVATLTK----------------------------------- 990
Fly 991 --NRH------NAYALLTQNQFTAH--VNSRYIFGATFDQKI----------------------- 1022
Fly 1023 -------------------------VTAWFNNIPLHSAPYALNVVHNAVARHLF-----DEEATI 1057
Fly 1058 DVTLAPLPF-RTAINTFPPSSHTFGGCLAFGICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVR 1121
Fly 1122 VCSYWTFTVLYDLLFLLIFCACVV-VMVAL----YENPNH------DVMLYGYISVTLMLGG--- 1172
Fly 1173 FWVILLAYLMASLCRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKL 1237
Fly 1238 FMIYEFKLICM-----DPVVNFTSVEVFKCNSIPNCCIKSNYG-TFTAG------IYHDLVILTL 1290
Fly 1291 LDIILLACLFVSEYHSIL--GFADCRLDTRTNESPD-SNQESRAFPGILSNDTAALVDKEHTSRL 1352
Fly 1353 NEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQ 1417
Fly 1418 LWIHDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVGL 1482
Fly 1483 TPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPAGLDPTGKRIILMMTSTMQAMGSSFLY 1547
Fly 1548 TMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKSGYQLEVRFKR-------KVNPNVSMSR 1605
Fly 1606 ATWNLINHFPMSPNKKFSAFMEIKFPDAVLTIERDDSMV-FVLPLGTTTFSEIFLTLRKDAFEMN 1669
Fly 1670 IEDYFITRNML----VGF---QIFTYD 1689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1494 | NP_001259763.1 | ABC2_membrane_3 | <263..480 | CDD:289468 | 41/225 (18%) |
CcmA | 541..848 | CDD:224054 | 112/355 (32%) | ||
ABC_subfamily_A | 541..761 | CDD:213230 | 76/228 (33%) | ||
ABC2_membrane_3 | 911..>1189 | CDD:289468 | 81/429 (19%) | ||
ABC2_membrane | <1080..>1188 | CDD:304374 | 32/121 (26%) | ||
ABC_subfamily_A | 1370..1577 | CDD:213230 | 50/206 (24%) | ||
PRK14255 | 1371..1586 | CDD:172743 | 50/214 (23%) | ||
Abca4 | NP_031404.1 | rim_protein | 1..2271 | CDD:130324 | 438/2042 (21%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 891..910 | 4/18 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1311..1344 | 5/36 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2266..2310 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838486 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.750 |