DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1494 and abca9

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_031750505.1 Gene:abca9 / 100496782 XenbaseID:XB-GENE-6464273 Length:1608 Species:Xenopus tropicalis


Alignment Length:1598 Identity:355/1598 - (22%)
Similarity:668/1598 - (41%) Gaps:322/1598 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 YVREGFIRLQKSVSESFLVLTSH-------KSLPTIQIRRFPITGREQDPLMGNLNYGMPFIIII 280
            |..|||:.||.|:..:.:.:||:       .|:..|:::...:|.|       .|.:...|:.::
 Frog   171 YWSEGFLSLQASIDSAIIEVTSNHSVWNNMASIVAIKMKSAQLTYR-------RLVHVASFVFVM 228

  Fly   281 GFLFPAQLFVWQV-VSEKQSQVRQFLINMNIGNLIHFVSWYLKGLIYEMISSLIIAALLKIRWDQ 344
            ...:.:.:::..: |:.::.::::.|..|.:.:|..::||   ||:|... .||:|.|:.:    
 Frog   229 PMCYVSLIYLLSLYVTRERYEMKETLRLMQLKDLAFWLSW---GLLYAGY-ILIVANLMTL---- 285

  Fly   345 DHGVLTQ------TPWYILILVLFCYNCAAVAFAIMVAAFFRN-ALNAVRVLTILWIMSYVPTFI 402
                :|:      :.:.:::.:.|.|..|.::|..|::|.||: ...||....|...:|.|...:
 Frog   286 ----ITKPFIFMTSSYGVIMFLFFLYGVALMSFTFMLSALFRSPRATAVAGFFITLFLSAVGLVL 346

  Fly   403 LSNNLEGNIHALRYVSYALPNVVATLV-----IEFLIERESIVHITWEDSGY---RLNYDGGHIT 459
            |..:              .|..:|.|:     ..|.:.....||:..:..|.   .|..|..|: 
 Frog   347 LRKD--------------FPQALAVLLSIFPQFAFAVGLLQSVHMDSDLEGVYFSDLMGDSSHM- 396

  Fly   460 VTASSWI-FMLNALVYCAIGLYVDMWRGGDRSGKKMK-----KPNTNASVQEDPYHERGDSFTHQ 518
              .|.:| .:|:::.|..:.||.:... .|:.|.|.:     |.:..:..:..|...:.|   :.
 Frog   397 --LSCFISLVLDSVFYMILTLYFEKVL-ADKHGVKHEPLFFLKASYWSKEKPSPLMGQTD---YS 455

  Fly   519 GQ-AIGVNSTKIYEVEPSHRRFKLKIKKLCKRFATNDR--PALNLFSWNVYENEVTVLMGHNGCG 580
            |: ::|....|:  .:..|.:..::|..:.|.|:..|:  .||.....|:||.::|.|:||:|.|
 Frog   456 GESSLGDFVEKV--PDDLHGKEAIRIHGVKKTFSDKDKSTEALRGLDLNIYEGQITALLGHSGAG 518

  Fly   581 KSTLLKILAGLVEPSRGTVMISSHNIQTERKAASMELGIAF--GHDMLLTGFTVIDYLRFICRVK 643
            |:|||.||:|:...|.|:..|.::.:...|....::..:.|  ..|:.....||.:.|.....:|
 Frog   519 KTTLLNILSGMYPASGGSATICNYKLSNMRHLEEIKKRVGFCPQGDIKFDPLTVKENLMVFAMIK 583

  Fly   644 GLHNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTDRDLCLVSICCAFVGNSPIILIDDVHSDLDKR 708
            |:... ::..:....|:.||:..::.....||:......::...|.:|:..::|:|:..:.||..
 Frog   584 GIPTK-QVAHKVQKVLSDLQMNDIENTEAITLSGGQRRKLTFGIAILGDPQVLLLDEPTAGLDPC 647

  Fly   709 TQSLVWNLINEEKSKRTIILVSNSPALAENIADRMAIMSNGELKCTGTKPFLKNMYGHGYRLTCV 773
            ::..||.::.|.|:.|..:..:.....|:.:|||.|::|.|.|||.|:..|||..:|.||.|...
 Frog   648 SRHHVWTILKENKADRVTLFSTQFMDEADILADRKAVISKGRLKCVGSSLFLKRKWGIGYHLRMQ 712

  Fly   774 KGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLENKFEDQFPMLIDDLEENMQQLG--VVSFR 836
            ...:...:.:..::...:|:..:......::|:.|..:..|.||.|...|:   .|:|  :||:.
 Frog   713 VSPSCDVELMTSIIKQRIPSAKLTAQNEEELTYALPFENMDVFPDLFSHLD---GQVGNSIVSYG 774

  Fly   837 IRDTSMEEIFLRFGCEDNDQSGAFQSHENAQVLLEEYYSTLAEANE-------KGRRT--GWKLF 892
            :..|:::::||:...|...:||.:..........|:.|...||..|       .|..|  ||:|:
 Frog   775 VSMTTLDDVFLKLEGEGEIESGDYDVFNPESRTAEDRYDISAEMEESLLLMSDSGNVTLSGWELW 839

  Fly   893 FLHGRAVIYKRWIAAHRH--------WIVLIFEVLAMAL-VAVCTFSSIFIYGKNYELEPLTFNL 948
            .....||...|::.. ||        .::|:..:||..| :.:...|:.||   ::||.|     
 Frog   840 RQQVLAVARIRFLKL-RHDTKSLRSILLLLVLFILASILSIIMAHISNKFI---SWELTP----- 895

  Fly   949 SQLHTVDAFVELFSEEEDVKDMHAYYTELLYWYDAHVATLTKNRHNAYALLTQNQFTAHVNSRYI 1013
                      .|:.:....: ::.|||:||    .|..|.:.......|:..||......|.:|.
 Frog   896 ----------SLYFQSPGSR-LNKYYTDLL----IHNNTGSSIDDFIGAVKEQNIAVQVANGKYD 945

  Fly  1014 F------GAT--------FDQKIVTAWFNNIPLHSA-PYALNVVHNA------VARH--LFDEEA 1055
            .      ||.        ::..||.    |...|:| |..||::.||      |:.|  :::...
 Frog   946 MDTIKYRGAIEVSQAEKGYNFTIVA----NPKAHNALPVLLNIISNALLKVFKVSEHVRVWNHPI 1006

  Fly  1056 TIDVTLAPLPFRTAINTFPPSSHTFGGCLAFGICFVLTF---IWPAFAIYMITERGSLLKKQQFL 1117
            |:|.  ..:..:|.|:                |.|.:.|   :.|..|:....:.....:.|..|
 Frog  1007 TMDE--MDIHHKTYIS----------------IMFFMIFASGLSPHIAMSSTEDNRINARTQLRL 1053

  Fly  1118 AGVRVCSYWTFTVLYDLLFLLIFCACVVVMVA-LYENPNHDVMLYGYISVTLMLGGFW-----VI 1176
            ||:...:||....|.|   ::::.:.:.:|.| |:...|:...|..:|:..:|:.|.:     ||
 Frog  1054 AGLFPSAYWFGQALVD---VILYWSLLFLMTAILFAFNNYSYFLLNFITAMVMIAGMFGYGMAVI 1115

  Fly  1177 LLAYLMASLCRNPCYGFLWLCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIY 1241
            |..|:::           ::.|...|....:|.|:       ::...|.|...::  |...|.||
 Frog  1116 LYVYVIS-----------FIFGKGKIHRDSWSLFF-------VIITFFPASNEIS--IFPWFYIY 1160

  Fly  1242 EFKLICMDPVVNFTSVEVFKCNSIPNCCIKSNYG--TFTAGIYHDLVILTLLDIILLAC---LFV 1301
            .|               :|...::        ||  .:|    .||..|...|..:|.|   |.:
 Frog  1161 LF---------------IFPVTTL--------YGIMDYT----EDLQFLQEADNFILPCTPYLHI 1198

  Fly  1302 SEYHSILGFADCRLDTRTNESPD------SNQESRAFPGILSNDTAALVDKEHTSRLNEEERSKY 1360
            ..:..:|.|.:.:...|:..:..      .|...:..|..|.||    ||::   .|.|:||.|.
 Frog  1199 IIFFGLLWFLEWKFGLRSLTTDPLFRISRRNMTVKKNPEELGND----VDED---VLAEKERVKN 1256

  Fly  1361 AAVGIGIVSK--------------------YRRNR--VLRDLDFTLAKSECLSITGANNSGKTTL 1403
            ||....:..|                    :::||  ..:::.|.:.|.|.|.:.|.|.:||||.
 Frog  1257 AATVANVEEKPVIIVDSLRKEYKVKKRGSFFKKNRKAATKNISFCVRKGEVLGLLGPNGAGKTTS 1321

  Fly  1404 LKVVVNETKMNAGQLWI--HDYSVNTHRVQCYRMVGYCPQKDSLPSEFTPRELLYIHAMLQG--- 1463
            :.::..|.|..||::.:  :|.:.:|      ..:|||||.:.|....|.:|.|.|:|.::|   
 Frog  1322 MYMLAGEVKPTAGEVVLCGNDPAEST------GFLGYCPQDNPLWPNLTVKEHLEIYAAVKGMKK 1380

  Fly  1464 -------HRHRIGRELSEALLRLVGLTPCWNRSVRMCTTGQIRRLYFAYAVLGSPDLICVDGVPA 1521
                   :|.....||.|.:          .:..|..:.|:.|::.||.:::|:|:::.:|....
 Frog  1381 EDAYIAINRVAAALELKEHM----------GKESRKLSLGESRKVCFAISMIGNPNIVLLDEPST 1435

  Fly  1522 GLDPTG-KRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQLWMIRPMDTETENYKS 1585
            ||||.. :|:...:.:..:......:.|.....:||.:..|..:::.|:|..|..:......:..
 Frog  1436 GLDPKAQQRLWRAIRAAFKNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSIQQLKSKFGK 1500

  Fly  1586 GYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNK-KFSAFMEIKFP-DAVLTIERDDSMVFVLP 1648
            ||.||:    ||.....:.:....:|..||.:..: :||:.:..|.| |.|.::           
 Frog  1501 GYLLEI----KVKETHQVDQIHNEIIRIFPHAARQDRFSSLLVYKIPMDNVQSL----------- 1550

  Fly  1649 LGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIF 1686
                  |:.||.|.:.....|||:|..:::.|.  |:|
 Frog  1551 ------SQAFLLLEEAKRAYNIEEYSFSQSTLE--QVF 1580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 44/233 (19%)
CcmA 541..848 CDD:224054 81/312 (26%)
ABC_subfamily_A 541..761 CDD:213230 61/223 (27%)
ABC2_membrane_3 911..>1189 CDD:289468 66/310 (21%)
ABC2_membrane <1080..>1188 CDD:304374 25/116 (22%)
ABC_subfamily_A 1370..1577 CDD:213230 55/241 (23%)
PRK14255 1371..1586 CDD:172743 54/229 (24%)
abca9XP_031750505.1 rim_protein <170..1595 CDD:130324 355/1598 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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