DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1494 and abca10

DIOPT Version :9

Sequence 1:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:1809 Identity:392/1809 - (21%)
Similarity:735/1809 - (40%) Gaps:378/1809 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KFLLMNWKNHKLQLANPLELLVILLVPPLFTLVAVLMRFFIPVNHRSDTVYDP---IDLDRSWMQ 70
            |.||:.|:.........|:.|..:.:  :|..||:             .:|.|   |||..:|  
 Frog    21 KNLLLKWRRKWHSTLEWLQNLAFVFL--MFLTVAI-------------ELYGPTSDIDLSPAW-- 68

  Fly    71 MVEKLEKARQVADTYNVKGNPFTPHLVIGWAPKRYGIFQAMMRRVQKQIEPMTSVGFEDCEEMRE 135
            ::.:|       |.:|        :|.:|:.                   ..||...:..|::.:
 Frog    69 VLGRL-------DAFN--------NLSVGYV-------------------HTTSTSRDIMEKVAK 99

  Fly   136 SVIENGLFAGLCFDGSPFVEDQVF--EEDTLESYSNIQPMLNYTIL----------LPSELRMLD 188
            .:|            .|.::.|.|  ||:.:|:.||:. |:..|.:          ||......|
 Frog   100 GII------------VPDIKVQEFADEEELIEAVSNMS-MVAVTFVDEFSYHIRYQLPKRKHPND 151

  Fly   189 GDFRMANWMTLYNDDPNTFVLTRLNQPYEGGFVGYVREGFIRLQKSVSESFLVLTSHKSLPTIQI 253
            ....|.|    ..||     |:..|..|      |..|||:.||.|:..:.:.|||:.|:.....
 Frog   152 YFAYMGN----CGDD-----LSYCNPTY------YWSEGFLSLQASIDSAIIDLTSNHSVWNNMA 201

  Fly   254 RRFPITGREQDPLMGNLNYGMPFIIIIGFLFPAQLFVW-QVVSEKQSQVRQFLINMNIGNLIHFV 317
            ....|..:..:.....|.:...||.::...:.:.:::. |.|:.::.::::.|..|.:.:|..::
 Frog   202 SIVAIKMKSAERSYKVLAHVASFIFVMPMCYVSLMYLLSQYVTRERYEMKETLRLMRLQDLAFWL 266

  Fly   318 SWYLKGLIYEMISSLIIAALLKIRWDQDHGVLTQTPWY-------ILILVLFCYNCAAVAFAIMV 375
            ||   ||:|... ..|:|.|:         .|...|:.       |::.:.|.|..|.::|..|:
 Frog   267 SW---GLLYSCY-VFIVANLM---------TLVTKPFVFITSSYGIIMFMFFLYGVALMSFTFML 318

  Fly   376 AAFFRN-ALNAVRVLTILWIMSYVPTFILSNNLEGNIHALRYVSYALPNVVATLVIEFLIERESI 439
            :|.||| ...|:....|..::|.:...:||.::..::..|..:   .|.      ..|.:.....
 Frog   319 SALFRNPRATAIAGFFITLLLSALGLILLSKHVPKSVEVLLSI---FPQ------FAFAVGITQS 374

  Fly   440 VHITWEDSG-YRLNYDGGHITVTASSWIFMLNALVYCAIGLYVDMWRGGDRSGKK---------- 493
            ||:..:..| |..:..||...:.:.....:|:::.|..:.||.:... .|:.|.|          
 Frog   375 VHMENDQEGVYFSDLTGGSSHMLSCFISLVLDSVFYMGLTLYFEKVL-ADKHGVKHEPLFFLKAS 438

  Fly   494 ---MKKPNTNASVQEDPYHERGDSFTHQGQAIGVNSTKIYEVEPS--HRRFKLKIKKLCKRFATN 553
               .:||:...:..:|    .|:|      ::|    ...|..|:  |.:..::|..:.|.:...
 Frog   439 YWSKEKPSPLMAQTDD----SGES------SLG----HFVEKVPADLHGKEAIRIHGVKKTYYDK 489

  Fly   554 DR--PALNLFSWNVYENEVTVLMGHNGCGKSTLLKILAGLVEPSRGTVMISSHNIQTERKAASME 616
            |:  .||.....|:||.::|.|:||:|.||:|||.||:|:...|.|:..:.::.:...|....::
 Frog   490 DKNTEALRDLDLNIYEGQITALLGHSGAGKTTLLNILSGMCPTSGGSATVCNYKLSNMRHLGEIK 554

  Fly   617 LGIAF--GHDMLLTGFTVIDYLRFICRVKGLHNNIEIDGQSNYFLNVLQIGGLKTKRIRTLTDRD 679
            ..:.|  ..|:.....||.:.|.....:||:.:. |:..:....|:.||:..::......|:...
 Frog   555 KRVGFCPQGDIKFDPLTVKENLTVFAMIKGIPSK-EVAHKVQTVLSDLQMNDIENIEASKLSGGQ 618

  Fly   680 LCLVSICCAFVGNSPIILIDDVHSDLDKRTQSLVWNLINEEKSKRTIILVSNSPALAENIADRMA 744
            ...::...|.:|:..::|:|:..:.||..::..:|.::.|.|:.|..:|.:.....|:.:|||..
 Frog   619 KRKLTFGIAILGDPQVLLLDEPTAGLDPCSRHNIWTILKESKADRVTLLSTQFMDEADILADRKV 683

  Fly   745 IMSNGELKCTGTKPFLKNMYGHGYRLTCVKGKNYKRDELFGMMNSYMPNMSIERDIGYKVTFVLE 809
            ::|.|:|||.||..|||..:|.||.|......:...:.:..::..::|:..:......::|:.|.
 Frog   684 VISKGKLKCVGTSLFLKRKWGVGYHLRMQVSPSCDVELMTSIIKQHIPSTKLTTQNEEELTYTLP 748

  Fly   810 NKFEDQFPMLIDDLEENMQQLG--VVSFRIRDTSMEEIFLRFGCEDNDQSGAF-------QSHEN 865
            .:..|.||.|...|:   .|:|  :|::.:..|:::::||:...|...:||.:       :::|:
 Frog   749 FENMDVFPDLFLHLD---GQVGNSIVNYGVSMTTLDDVFLKLEGEGEIESGDYDVFNPESRTNED 810

  Fly   866 AQVLLEEYYSTLAEANEKGRRT--GWKLFFLHGRAVIYKRWIAAHRH------WIVLIFEVLAMA 922
            .:....|...:|.:.::.|..|  ||:|:.....||...|.:.. ||      .|:|:..|:.:.
 Frog   811 REDFSTEMEESLLQMSDSGNVTLSGWELWRQQVLAVARIRLLKL-RHDTKSFRSILLLLVVITLP 874

  Fly   923 LVAVCTFSSIFIYGKNYELEPLTFNLSQLHTVDAFVELFSEEEDVKDMHAYYTELLYWYDAHVAT 987
            .:.:...|:|......:||.|..:..|..:.                ::.|||:||         
 Frog   875 PIIIIITSNIVNTFDAWELTPHLYFQSPRNR----------------LNKYYTDLL--------- 914

  Fly   988 LTKNRHNAY-----ALLTQNQFTAHVNSRYIFGATFDQKIV-----------------TAWFNNI 1030
            :..|..::.     |:..||.....||..|      |.:.|                 |...|..
 Frog   915 ICNNTGSSIEDFVGAVKEQNIEVQVVNGEY------DTETVKYRGAIEVSQMEKGYNFTIVANPK 973

  Fly  1031 PLHSAPYALNVVHNAVAR--------HLFDEEATIDVT-LAPLPFRTAINTFPPSSHTFGGCLAF 1086
            ..:|.|..||::.||:.:        .:::...|.|.| :..||:.:               |.|
 Frog   974 AFNSLPVLLNIISNALLKILKVSGHFRVWNHPITTDGTDIIFLPYMS---------------LIF 1023

  Fly  1087 GICFVLTFIWPAFAIYMITERGSLLKKQQFLAGVRVCSYWTFTVLYD--LLFLLIFCACVVVMVA 1149
            .|.|...|. |..|:....:.....:.|..::|:...:||....|.|  |.::|:|     :|||
 Frog  1024 FIIFASAFC-PHIAMSSTEDNRINARNQLRISGLFPSAYWFGQALVDVILYWILLF-----LMVA 1082

  Fly  1150 LYENPNHDVMLYGYISVTLMLG----GFWVILLAYLMASLCRNPCYGFLWLCGINSIGLVCFSQF 1210
            :|...|..::|....::.:::|    |..::|..|:::         |::..|            
 Frog  1083 IYFAFNSYILLDFVPAMVMIIGIIGYGTAMVLYVYVIS---------FIFGRG------------ 1126

  Fly  1211 YRTHPES----MLLEPTFMAMYTVATVICKLFMIY--EFKLICMDPVVNFT-SVEVFKCNSIPNC 1268
             ::|.:|    .::..||..|: :...:.:||.||  .|....:..::.:| .::||...|    
 Frog  1127 -KSHTDSWSLFFVITSTFPVMF-MDVFMFRLFTIYYFVFPASALSGIMEYTYRLQVFPGGS---- 1185

  Fly  1269 CIKSNYGTFTAGIYHDLVILTLLDIILLACLFVSEYHSILGFADCRLD-----TRTNESPDSNQE 1328
                   .:||.|......|.:  ||....|:..|:.  .|.....:|     :|...:...|.|
 Frog  1186 -------EYTALIEQCTPYLHI--IIFFVLLWFLEWK--FGLRSLTIDPLFRISRRKITTKKNPE 1239

  Fly  1329 SRAFPGILSNDT--AALVDKEHTSR----LNEEE---------RSKYAAVGIGIVSKYRRNRVLR 1378
            .      |.||.  ..|.:||...:    .|.||         |.:|.....|...|..:....:
 Frog  1240 E------LGNDVDEDVLAEKERVKKAATIANVEEKPVIIADSLRKEYKVKKGGSFFKKNKRAATK 1298

  Fly  1379 DLDFTLAKSECLSITGANNSGKTTLLKVVVNETKMNAGQLWIHDYSVNTHRVQCYRMVGYCPQKD 1443
            ::.|.:.|.|.|.:.|.|.:||||.:.::..|.|..||::.:    .....|.....:|||||.:
 Frog  1299 NVSFCVKKGEVLGLLGPNGAGKTTSMYMLAGEVKPTAGEVLL----CGNDPVGSTGFLGYCPQDN 1359

  Fly  1444 SLPSEFTPRELLYIHAMLQGHRHRIGRELSEALLRLVG---LTPCWNRSVRMCTTGQIRRLYFAY 1505
            .|....|.:|.|.|:|.::|.:.   .:.|.|:.|:..   |.....::.|..:.|..|::.||.
 Frog  1360 PLWPNLTVKEHLEIYAAVKGMKK---EDASIAINRVASALELKEHMGKAARKLSLGVSRKVCFAI 1421

  Fly  1506 AVLGSPDLICVDGVPAGLDPTG-KRIILMMTSTMQAMGSSFLYTMLTGLDAERLSLRTPLLLEGQ 1569
            ::||:|:::.:|....||||.| :|:...:.:..:......:.|.....:||.:..|..:::.|:
 Frog  1422 SMLGNPNIVLLDEPSTGLDPKGQQRLWRAIRAAFKNKDRGAILTTHYMEEAEAVCDRVAIMVSGK 1486

  Fly  1570 LWMIRPMDTETENYKSGYQLEVRFKRKVNPNVSMSRATWNLINHFPMSPNK-KFSAFMEIKFP-D 1632
            |..|..:......:..||.||:    ||..:..:.:....:|..||.:..: :||:.:..|.| |
 Frog  1487 LRCIGSIQQLKSKFGKGYLLEI----KVKESHQVDQIHNEIIRIFPHAARQDRFSSLLVYKIPMD 1547

  Fly  1633 AVLTIERDDSMVFVLPLGTTTFSEIFLTLRKDAFEMNIEDYFITRNMLVGFQIF 1686
            .|.::                 |:.||.|.:.....|||:|..:::.|.  |:|
 Frog  1548 NVQSL-----------------SQAFLLLEEAKRAYNIEEYSFSQSTLE--QVF 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468 44/226 (19%)
CcmA 541..848 CDD:224054 78/312 (25%)
ABC_subfamily_A 541..761 CDD:213230 59/223 (26%)
ABC2_membrane_3 911..>1189 CDD:289468 62/314 (20%)
ABC2_membrane <1080..>1188 CDD:304374 26/113 (23%)
ABC_subfamily_A 1370..1577 CDD:213230 54/210 (26%)
PRK14255 1371..1586 CDD:172743 53/218 (24%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 367/1660 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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